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Yin Shen - Publications

Affiliations: 
Wuhan University, Wuhan Shi, Hubei Sheng, China 
Area:
visual system
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Huang X, Tong Y, Qi CX, Xu YT, Dan HD, Deng QQ, Shen Y. Mapping Regional Homogeneity and Functional Connectivity of the Visual Cortex in Resting-State fMRI. Journal of Visualized Experiments : Jove. PMID 34487114 DOI: 10.3791/60305  0.282
2021 Li Y, Shen Y, Cai D, Shen Y. Sox2 Knockdown in the Neonatal Retina Causes Cell Fate to Switch from Amacrine to Bipolar. Brain Research. 147265. PMID 33422527 DOI: 10.1016/j.brainres.2020.147265  0.327
2021 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33398137 DOI: 10.1038/s41586-020-03089-4  0.225
2020 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33037424 DOI: 10.1038/s41586-020-2841-4  0.226
2020 Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4  0.308
2020 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... Shen Y, et al. An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. 583: 744-751. PMID 32728240 DOI: 10.1038/S41586-020-2093-3  0.293
2020 Xiao D, Deng Q, Guo Y, Huang X, Zou M, Zhong J, Rao P, Xu Z, Liu Y, Hu Y, Shen Y, Jin K, Xiang M. Generation of self-organized sensory ganglion organoids and retinal ganglion cells from fibroblasts. Science Advances. 6: eaaz5858. PMID 32523990 DOI: 10.1126/Sciadv.Aaz5858  0.34
2019 Shen Y, Luo X, Liu S, Shen Y, Nawy S, Shen Y. Rod bipolar cells dysfunction occurs before ganglion cells loss in excitotoxin-damaged mouse retina. Cell Death & Disease. 10: 905. PMID 31787761 DOI: 10.1038/s41419-019-2140-x  0.691
2019 Jiang MN, Ma XY, Zhao QQ, Li Y, Xing YQ, Deng QQ, Shen Y. The neuroprotective effects of novel estrogen receptor GPER1 in mouse retinal ganglion cell degeneration. Experimental Eye Research. 107826. PMID 31586450 DOI: 10.1016/J.Exer.2019.107826  0.418
2019 Song M, Yang X, Ren X, Maliskova L, Li B, Jones IR, Wang C, Jacob F, Wu K, Traglia M, Tam TW, Jamieson K, Lu SY, Ming GL, Li Y, ... ... Shen Y, et al. Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes. Nature Genetics. 51: 1252-1262. PMID 31367015 DOI: 10.1038/S41588-019-0472-1  0.343
2019 Gao Q, Liu Y, Lei X, Deng Q, Tong Y, Du L, Shen Y. A Novel CNGA1 Gene Mutation (c.G622A) of Autosomal Recessive Retinitis Pigmentosa Leads to the CNGA1 Protein Reduction on Membrane. Biochemical Genetics. PMID 30652268 DOI: 10.1007/S10528-019-09907-3  0.313
2018 Liu S, Chen Y, Chen Z, Xing Y, Shen Y. Immunohistochemical profile of long-standing traumatic retinal detachment in atrophic globe in a young patient. Experimental and Therapeutic Medicine. 16: 2387-2391. PMID 30186481 DOI: 10.3892/Etm.2018.6497  0.37
2017 Chen Y, Luo X, Liu S, Shen Y. Neuroprotective effect of cannabinoid receptor 1 antagonist in the MNU-induced retinal degeneration model. Experimental Eye Research. PMID 29126840 DOI: 10.1016/J.Exer.2017.11.001  0.413
2017 He Y, Gorkin DU, Dickel DE, Nery JR, Castanon RG, Lee AY, Shen Y, Visel A, Pennacchio LA, Ren B, Ecker JR. Improved regulatory element prediction based on tissue-specific local epigenomic signatures. Proceedings of the National Academy of Sciences of the United States of America. PMID 28193886 DOI: 10.1073/Pnas.1618353114  0.312
2015 Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AY, Ye Z, Kim A, Rajagopal N, Xie W, Diao Y, Liang J, Zhao H, Lobanenkov VV, Ecker JR, et al. Chromatin architecture reorganization during stem cell differentiation. Nature. 518: 331-6. PMID 25693564 DOI: 10.1038/Nature14222  0.33
2014 Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature. 515: 355-64. PMID 25409824 DOI: 10.1038/Nature13992  0.69
2014 Li Z, He T, Du K, Xing YQ, Run YM, Yan Y, Shen Y. Inhibition of oxygen-induced ischemic retinal neovascularization with adenoviral 15-lipoxygenase-1 gene transfer via up-regulation of PPAR-γ and down-regulation of VEGFR-2 expression. Plos One. 9: e85824. PMID 24465728 DOI: 10.1371/Journal.Pone.0085824  0.371
2013 Hon GC, Rajagopal N, Shen Y, McCleary DF, Yue F, Dang MD, Ren B. Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues. Nature Genetics. 45: 1198-206. PMID 23995138 DOI: 10.1038/Ng.2746  0.28
2013 Fan W, Xing Y, Zhong Y, Chen C, Shen Y. Expression of NMDA receptor subunit 1 in the rat retina. Acta Histochemica. 115: 42-7. PMID 22512920 DOI: 10.1016/J.Acthis.2012.03.005  0.419
2012 Peachey NS, Pearring JN, Bojang P, Hirschtritt ME, Sturgill-Short G, Ray TA, Furukawa T, Koike C, Goldberg AF, Shen Y, McCall MA, Nawy S, Nishina PM, Gregg RG. Depolarizing bipolar cell dysfunction due to a Trpm1 point mutation. Journal of Neurophysiology. 108: 2442-51. PMID 22896717 DOI: 10.1152/Jn.00137.2012  0.672
2012 Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... Shen Y, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/Gb-2012-13-8-418  0.466
2012 Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, Kuan S, Wagner U, Dixon J, Lee L, Lobanenkov VV, Ren B. A map of the cis-regulatory sequences in the mouse genome. Nature. 488: 116-20. PMID 22763441 DOI: 10.1038/Nature11243  0.315
2012 Yu M, Hon GC, Szulwach KE, Song CX, Zhang L, Kim A, Li X, Dai Q, Shen Y, Park B, Min JH, Jin P, Ren B, He C. Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome. Cell. 149: 1368-80. PMID 22608086 DOI: 10.1016/J.Cell.2012.04.027  0.282
2012 Shen Y, Rampino MA, Carroll RC, Nawy S. G-protein-mediated inhibition of the Trp channel TRPM1 requires the Gβγ dimer. Proceedings of the National Academy of Sciences of the United States of America. 109: 8752-7. PMID 22586107 DOI: 10.1073/Pnas.1117433109  0.691
2012 Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature. 485: 376-80. PMID 22495300 DOI: 10.1038/Nature11082  0.297
2012 Hunkapiller J, Shen Y, Diaz A, Cagney G, McCleary D, Ramalho-Santos M, Krogan N, Ren B, Song JS, Reiter JF. Polycomb-like 3 promotes polycomb repressive complex 2 binding to CpG islands and embryonic stem cell self-renewal. Plos Genetics. 8: e1002576. PMID 22438827 DOI: 10.1371/Journal.Pgen.1002576  0.289
2011 Pearring JN, Bojang P, Shen Y, Koike C, Furukawa T, Nawy S, Gregg RG. A role for nyctalopin, a small leucine-rich repeat protein, in localizing the TRP melastatin 1 channel to retinal depolarizing bipolar cell dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 10060-6. PMID 21734298 DOI: 10.1523/Jneurosci.1014-11.2011  0.703
2009 Shen Y, Heimel JA, Kamermans M, Peachey NS, Gregg RG, Nawy S. A transient receptor potential-like channel mediates synaptic transmission in rod bipolar cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 6088-93. PMID 19439586 DOI: 10.1523/Jneurosci.0132-09.2009  0.712
2008 Snellman J, Kaur T, Shen Y, Nawy S. Regulation of ON bipolar cell activity. Progress in Retinal and Eye Research. 27: 450-63. PMID 18524666 DOI: 10.1016/J.Preteyeres.2008.03.003  0.703
2006 Shen Y, Liu XL, Yang XL. N-methyl-D-aspartate receptors in the retina. Molecular Neurobiology. 34: 163-79. PMID 17308350 DOI: 10.1385/Mn:34:3:163  0.645
2006 Shen Y, Zhang M, Jin Y, Yang XL. Functional N-methyl-D-aspartate receptors are expressed in cone-driven horizontal cells in carp retina. Neuro-Signals. 15: 174-9. PMID 17047395 DOI: 10.1159/000096350  0.612
2005 Shen Y, Chen L, Ping Y, Yang XL. Glycine modulates the center response of ON type rod-dominant bipolar cells in carp retina. Brain Research Bulletin. 67: 492-7. PMID 16216698 DOI: 10.1016/J.Brainresbull.2005.07.013  0.644
2004 Huang H, Luo DG, Shen Y, Zhang AJ, Yang R, Yang XL. AMPA receptor is involved in transmission of cone signal to ON bipolar cells in carp retina. Brain Research. 1002: 86-93. PMID 14988037 DOI: 10.1016/J.Brainres.2003.12.019  0.716
2003 Shen Y, Zhang AJ, Yang XL. Uncoupling of horizontal cells alters the receptive fields of retinal bipolar cells. Neuroreport. 14: 2159-62. PMID 14625439 DOI: 10.1097/00001756-200312020-00005  0.638
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