Kan Nobuta, Ph.D. - Publications

Affiliations: 
2003 Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Plant Pathology Agriculture, Genetics, Information Science, Plant Culture Agriculture

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Venu RC, Ma J, Jia Y, Liu G, Jia MH, Nobuta K, Sreerekha MV, Moldenhauer K, McClung AM, Meyers BC, Wang GL. Identification of candidate genes associated with positive and negative heterosis in rice. Plos One. 9: e95178. PMID 24743656 DOI: 10.1371/Journal.Pone.0095178  0.358
2013 Lee K, Huang X, Yang C, Lee D, Ho V, Nobuta K, Fan JB, Wang K. A genome-wide survey of highly expressed non-coding RNAs and biological validation of selected candidates in Agrobacterium tumefaciens. Plos One. 8: e70720. PMID 23950988 DOI: 10.1371/Journal.Pone.0070720  0.395
2013 Venu RC, Sreerekha MV, Sheshu Madhav M, Nobuta K, Mohan KM, Chen S, Jia Y, Meyers BC, Wang GL. Deep transcriptome sequencing reveals the expression of key functional and regulatory genes involved in the abiotic stress signaling pathways in rice Journal of Plant Biology. 56: 216-231. DOI: 10.1007/S12374-013-0075-9  0.35
2012 Sánchez-León N, Arteaga-Vázquez M, Alvarez-Mejía C, Mendiola-Soto J, Durán-Figueroa N, Rodríguez-Leal D, Rodríguez-Arévalo I, García-Campayo V, García-Aguilar M, Olmedo-Monfil V, Arteaga-Sánchez M, de la Vega OM, Nobuta K, Vemaraju K, Meyers BC, et al. Transcriptional analysis of the Arabidopsis ovule by massively parallel signature sequencing. Journal of Experimental Botany. 63: 3829-42. PMID 22442422 DOI: 10.1093/Jxb/Ers075  0.332
2011 Shen Y, Venu RC, Nobuta K, Wu X, Notibala V, Demirci C, Meyers BC, Wang GL, Ji G, Li QQ. Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing. Genome Research. 21: 1478-86. PMID 21813626 DOI: 10.1101/Gr.114744.110  0.481
2011 Venu R, Sreerekha M, Nobuta K, Beló A, Ning Y, An G, Meyers BC, Wang GL. Deep sequencing reveals the complex and coordinated transcriptional regulation of genes related to grain quality in rice cultivars. Bmc Genomics. 12: 190. PMID 21492454 DOI: 10.1186/1471-2164-12-190  0.387
2010 Arteaga-Vazquez M, Sidorenko L, Rabanal FA, Shrivistava R, Nobuta K, Green PJ, Meyers BC, Chandler VL. RNA-mediated trans-communication can establish paramutation at the b1 locus in maize. Proceedings of the National Academy of Sciences of the United States of America. 107: 12986-91. PMID 20616013 DOI: 10.1073/Pnas.1007972107  0.407
2010 Venu RC, Sheshu Madhav M, Sreerekha MV, Nobuta K, Zhang Y, Carswell P, Boehm MJ, Meyers BC, Korth KL, Wang GL. Deep and comparative transcriptome analysis of rice plants infested by the beet armyworm (Spodoptera exigua) and water weevil (Lissorhoptrus oryzophilus) Rice. 3: 22-35. DOI: 10.1007/S12284-010-9037-8  0.452
2009 Hanada K, Vallejo V, Nobuta K, Slotkin RK, Lisch D, Meyers BC, Shiu SH, Jiang N. The functional role of pack-MULEs in rice inferred from purifying selection and expression profile. The Plant Cell. 21: 25-38. PMID 19136648 DOI: 10.1105/Tpc.108.063206  0.4
2008 Lin H, Ouyang S, Egan A, Nobuta K, Haas BJ, Zhu W, Gu X, Silva JC, Meyers BC, Buell CR. Characterization of paralogous protein families in rice. Bmc Plant Biology. 8: 18. PMID 18284697 DOI: 10.1186/1471-2229-8-18  0.491
2007 Nobuta K, Vemaraju K, Meyers BC. Methods for analysis of gene expression in plants using MPSS. Methods in Molecular Biology (Clifton, N.J.). 406: 387-408. PMID 18287704 DOI: 10.1007/978-1-59745-535-0_19  0.323
2007 Nobuta K, Okrent RA, Stoutemyer M, Rodibaugh N, Kempema L, Wildermuth MC, Innes RW. The GH3 acyl adenylase family member PBS3 regulates salicylic acid-dependent defense responses in Arabidopsis. Plant Physiology. 144: 1144-56. PMID 17468220 DOI: 10.1104/Pp.107.097691  0.56
2006 Gowda M, Venu RC, Raghupathy MB, Nobuta K, Li H, Wing R, Stahlberg E, Couglan S, Haudenschild CD, Dean R, Nahm BH, Meyers BC, Wang GL. Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods. Bmc Genomics. 7: 310. PMID 17156450 DOI: 10.1186/1471-2164-7-310  0.402
2006 Yan H, Ito H, Nobuta K, Ouyang S, Jin W, Tian S, Lu C, Venu RC, Wang GL, Green PJ, Wing RA, Buell CR, Meyers BC, Jiang J. Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere. The Plant Cell. 18: 2123-33. PMID 16877494 DOI: 10.1105/Tpc.106.043794  0.309
2006 Nakano M, Nobuta K, Vemaraju K, Tej SS, Skogen JW, Meyers BC. Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA. Nucleic Acids Research. 34: D731-5. PMID 16381968 DOI: 10.1093/Nar/Gkj077  0.422
2005 Nobuta K, Ashfield T, Kim S, Innes RW. Diversification of non-TIR class NB-LRR genes in relation to whole-genome duplication events in Arabidopsis. Molecular Plant-Microbe Interactions : Mpmi. 18: 103-9. PMID 15720078 DOI: 10.1094/Mpmi-18-0103  0.615
2005 Nobuta K, Meyers BC. Pseudomonas versus arabidopsis: Models for genomic research into plant disease resistance Bioscience. 55: 679-686. DOI: 10.1641/0006-3568(2005)055[0679:Pvamfg]2.0.Co;2  0.444
2004 Ashfield T, Ong LE, Nobuta K, Schneider CM, Innes RW. Convergent evolution of disease resistance gene specificity in two flowering plant families. The Plant Cell. 16: 309-18. PMID 14742871 DOI: 10.1105/Tpc.016725  0.396
1988 Nobuta K, Tolmasky ME, Crosa LM, Crosa JH. Sequencing and expression of the 6'-N-acetyltransferase gene of transposon Tn1331 from Klebsiella pneumoniae Journal of Bacteriology. 170: 3769-3773. PMID 2841303  0.414
Show low-probability matches.