Sam Yeaman - Publications

Affiliations: 
2004-2015 University of British Columbia, Vancouver, Vancouver, BC, Canada 
 2015- University of Calgary, Calgary, Alberta, Canada 
Area:
Evolutionary theory, genetics of adaptation

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Soudi S, Jahani M, Todesco M, Owens GL, Bercovich N, Rieseberg LH, Yeaman S. Repeatability of adaptation in sunflowers reveals that genomic regions harbouring inversions also drive adaptation in species lacking an inversion. Elife. 12. PMID 38095362 DOI: 10.7554/eLife.88604  0.742
2023 Booker TR, Yeaman S, Whiting JR, Whitlock MC. The WZA: A window-based method for characterizing genotype-environment association. Molecular Ecology Resources. PMID 36785926 DOI: 10.1111/1755-0998.13768  0.63
2022 Booker TR, Yeaman S, Whitlock MC. Using genome scans to identify genes used repeatedly for adaptation. Evolution; International Journal of Organic Evolution. PMID 36626817 DOI: 10.1093/evolut/qpac063  0.66
2022 Li Q, Lindtke D, Rodríguez-Ramírez C, Kakioka R, Takahashi H, Toyoda A, Kitano J, Ehrlich RL, Chang Mell J, Yeaman S. Local adaptation and the evolution of genome architecture in threespine stickleback. Genome Biology and Evolution. PMID 35594844 DOI: 10.1093/gbe/evac075  0.391
2022 Yeaman S. Evolution of polygenic traits under global vs local adaptation. Genetics. 220. PMID 35134196 DOI: 10.1093/genetics/iyab134  0.427
2021 Lind B, Lu M, Obreht Vidakovic D, Singh P, Booker T, Aitken S, Yeaman S. Haploid, diploid, and pooled exome capture recapitulate features of biology and paralogy in two non-model tree species. Molecular Ecology Resources. PMID 34270863 DOI: 10.1111/1755-0998.13474  0.645
2021 MacLachlan IR, McDonald TK, Lind BM, Rieseberg LH, Yeaman S, Aitken SN. Genome-wide shifts in climate-related variation underpin responses to selective breeding in a widespread conifer. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33649218 DOI: 10.1073/pnas.2016900118  0.728
2021 Booker TR, Yeaman S, Whitlock MC. Global adaptation complicates the interpretation of genome scans for local adaptation. Evolution Letters. 5: 4-15. PMID 33552532 DOI: 10.1002/evl3.208  0.673
2020 Lu M, Feau N, Obreht Vidakovic D, Ukrainetz N, Wong B, Aitken SN, Hamelin R, Yeaman S. Comparative Gene Expression Analysis Reveals Mechanism of Response to the Fungal Pathogen . Molecular Plant-Microbe Interactions : Mpmi. PMID 33258711 DOI: 10.1094/MPMI-10-20-0282-R  0.592
2020 Todesco M, Owens GL, Bercovich N, Légaré JS, Soudi S, Burge DO, Huang K, Ostevik KL, Drummond EBM, Imerovski I, Lande K, Pascual-Robles MA, Nanavati M, Jahani M, Cheung W, ... ... Yeaman S, et al. Massive haplotypes underlie ecotypic differentiation in sunflowers. Nature. PMID 32641831 DOI: 10.1038/S41586-020-2467-6  0.778
2020 Booker TR, Yeaman S, Whitlock MC. Variation in recombination rate affects detection of outliers in genome scans under neutrality. Molecular Ecology. PMID 32535981 DOI: 10.1111/Mec.15501  0.683
2020 Láruson ÁJ, Yeaman S, Lotterhos KE. The Importance of Genetic Redundancy in Evolution. Trends in Ecology & Evolution. PMID 32439075 DOI: 10.1016/J.Tree.2020.04.009  0.443
2020 Li Q, Ramasamy S, Singh P, Hagel JM, Dunemann SM, Chen X, Chen R, Yu L, Tucker JE, Facchini PJ, Yeaman S. Gene clustering and copy number variation in alkaloid metabolic pathways of opium poppy. Nature Communications. 11: 1190. PMID 32132540 DOI: 10.1038/S41467-020-15040-2  0.339
2019 Hodgins KA, Yeaman S. Mating system impacts the genetic architecture of adaptation to heterogeneous environments. The New Phytologist. PMID 31505030 DOI: 10.1111/Nph.16186  0.466
2019 Mee JA, Yeaman S. Unpacking Conditional Neutrality: Genomic Signatures of Selection on Conditionally Beneficial and Conditionally Deleterious Mutations. The American Naturalist. 194: 529-540. PMID 31490722 DOI: 10.1086/702314  0.451
2019 Lu M, Hodgins KA, Degner JC, Yeaman S. Purifying selection does not drive signatures of convergent local adaptation of lodgepole pine and interior spruce. Bmc Evolutionary Biology. 19: 110. PMID 31138118 DOI: 10.1186/S12862-019-1438-8  0.474
2019 Rubenstein DR, Ågren JA, Carbone L, Elde NC, Hoekstra HE, Kapheim KM, Keller L, Moreau CS, Toth AL, Yeaman S, Hofmann HA. Coevolution of Genome Architecture and Social Behavior. Trends in Ecology & Evolution. PMID 31130318 DOI: 10.1016/J.Tree.2019.04.011  0.361
2018 Yeaman S, Gerstein AC, Hodgins KA, Whitlock MC. Quantifying how constraints limit the diversity of viable routes to adaptation. Plos Genetics. 14: e1007717. PMID 30296265 DOI: 10.1371/Journal.Pgen.1007717  0.713
2018 Lotterhos KE, Yeaman S, Degner J, Aitken S, Hodgins KA. Modularity of genes involved in local adaptation to climate despite physical linkage. Genome Biology. 19: 157. PMID 30290843 DOI: 10.1186/S13059-018-1545-7  0.68
2018 McDonald TK, Yeaman S. Effect of migration and environmental heterogeneity on the maintenance of quantitative genetic variation: a simulation study. Journal of Evolutionary Biology. PMID 29938863 DOI: 10.1111/Jeb.13341  0.441
2018 MacLachlan IR, Yeaman S, Aitken SN. Growth gains from selective breeding in a spruce hybrid zone do not compromise local adaptation to climate. Evolutionary Applications. 11: 166-181. PMID 29387153 DOI: 10.1111/Eva.12525  0.684
2018 Lindtke D, Yeaman S. Identifying the loci of speciation: the challenge beyond genome scans. Journal of Evolutionary Biology. 30: 1478-1481. PMID 28786194 DOI: 10.1111/Jeb.13098  0.384
2017 Conte GL, Hodgins KA, Yeaman S, Degner JC, Aitken SN, Rieseberg LH, Whitlock MC. Bioinformatically predicted deleterious mutations reveal complementation in the interior spruce hybrid complex. Bmc Genomics. 18: 970. PMID 29246191 DOI: 10.1186/S12864-017-4344-8  0.734
2017 Owens GL, Todesco M, Drummond EBM, Yeaman S, Rieseberg LH. A novel post hoc method for detecting index switching finds no evidence for increased switching on the Illumina HiSeq X. Molecular Ecology Resources. PMID 28817224 DOI: 10.1111/1755-0998.12713  0.666
2016 Yeaman S, Hodgins KA, Lotterhos KE, Suren H, Nadeau S, Degner JC, Nurkowski KA, Smets P, Wang T, Gray LK, Liepe KJ, Hamann A, Holliday JA, Whitlock MC, Rieseberg LH, et al. Convergent local adaptation to climate in distantly related conifers. Science (New York, N.Y.). 353: 1431-1433. PMID 27708038 DOI: 10.1126/Science.Aaf7812  0.797
2016 Suren H, Hodgins KA, Yeaman S, Nurkowski KA, Smets P, Rieseberg LH, Aitken SN, Holliday JA. Exome capture from the spruce and pine giga-genomes. Molecular Ecology Resources. PMID 27428061 DOI: 10.1111/1755-0998.12570  0.784
2016 Yeaman S, Aeschbacher S, Bürger R. The evolution of genomic islands by increased establishment probability of linked alleles. Molecular Ecology. PMID 27206531 DOI: 10.1111/Mec.13611  0.469
2016 Hodgins KA, Yeaman S, Nurkowski K, Rieseberg LH, Aitken SN. Expression divergence is correlated with sequence evolution but not positive selection in conifers. Molecular Biology and Evolution. PMID 26873578 DOI: 10.1093/Molbev/Msw032  0.732
2015 Yeaman S. Local Adaptation by Alleles of Small Effect. The American Naturalist. 186: S74-89. PMID 26656219 DOI: 10.1086/682405  0.467
2015 Débarre F, Yeaman S, Guillaume F. Evolution of Quantitative Traits under a Migration-Selection Balance: When Does Skew Matter? The American Naturalist. 186: S37-S47. PMID 26656215 DOI: 10.1086/681717  0.595
2014 Yeaman S, Hodgins KA, Suren H, Nurkowski KA, Rieseberg LH, Holliday JA, Aitken SN. Conservation and divergence of gene expression plasticity following c. 140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca×Picea engelmannii). The New Phytologist. 203: 578-91. PMID 24750196 DOI: 10.1111/Nph.12819  0.784
2014 Condon C, Cooper BS, Yeaman S, Angilletta MJ. Temporal variation favors the evolution of generalists in experimental populations of Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 68: 720-8. PMID 24152128 DOI: 10.1111/Evo.12296  0.404
2013 Yeaman S. Hybridization and the porous genome: patterns of isolation and introgression in manakins. Molecular Ecology. 22: 3195-7. PMID 24433570 DOI: 10.1111/Mec.12314  0.456
2013 Renaut S, Grassa CJ, Yeaman S, Moyers BT, Lai Z, Kane NC, Bowers JE, Burke JM, Rieseberg LH. Genomic islands of divergence are not affected by geography of speciation in sunflowers. Nature Communications. 4: 1827. PMID 23652015 DOI: 10.1038/Ncomms2833  0.756
2013 Yeaman S. Genomic rearrangements and the evolution of clusters of locally adaptive loci. Proceedings of the National Academy of Sciences of the United States of America. 110: E1743-51. PMID 23610436 DOI: 10.1073/Pnas.1219381110  0.475
2013 Alberto FJ, Aitken SN, Alía R, González-Martínez SC, Hänninen H, Kremer A, Lefèvre F, Lenormand T, Yeaman S, Whetten R, Savolainen O. Potential for evolutionary responses to climate change - evidence from tree populations. Global Change Biology. 19: 1645-61. PMID 23505261 DOI: 10.1111/Gcb.12181  0.709
2013 Vines TH, Andrew RL, Bock DG, Franklin MT, Gilbert KJ, Kane NC, Moore JS, Moyers BT, Renaut S, Rennison DJ, Veen T, Yeaman S. Mandated data archiving greatly improves access to research data. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 27: 1304-8. PMID 23288929 DOI: 10.1096/Fj.12-218164  0.677
2012 Feder JL, Gejji R, Yeaman S, Nosil P. Establishment of new mutations under divergence and genome hitchhiking. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 461-74. PMID 22201175 DOI: 10.1098/Rstb.2011.0256  0.428
2012 Yeaman S, Schick A, Lehmann L. Social network architecture and the maintenance of deleterious cultural traits. Journal of the Royal Society, Interface / the Royal Society. 9: 848-58. PMID 22031730 DOI: 10.1098/Rsif.2011.0555  0.528
2011 Yeaman S, Otto SP. Establishment and maintenance of adaptive genetic divergence under migration, selection, and drift. Evolution; International Journal of Organic Evolution. 65: 2123-9. PMID 21729066 DOI: 10.1111/J.1558-5646.2011.01277.X  0.429
2011 Yeaman S, Whitlock MC. The genetic architecture of adaptation under migration-selection balance. Evolution; International Journal of Organic Evolution. 65: 1897-911. PMID 21729046 DOI: 10.1111/J.1558-5646.2011.01269.X  0.692
2011 Yeaman S, Bshary R, Lehmann L. The effect of innovation and sex-specific migration on neutral cultural differentiation Animal Behaviour. 82: 101-112. DOI: 10.1016/J.Anbehav.2011.04.004  0.572
2010 Yeaman S, Chen Y, Whitlock MC. No effect of environmental heterogeneity on the maintenance of genetic variation in wing shape in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 64: 3398-408. PMID 20624178 DOI: 10.1111/J.1558-5646.2010.01075.X  0.666
2010 Correia L, Yeaman S, Whitlock MC. Local adaptation does not always predict high mating success. Journal of Evolutionary Biology. 23: 875-8. PMID 20487138 DOI: 10.1111/J.1420-9101.2010.01957.X  0.617
2009 Yeaman S, Guillaume F. Predicting adaptation under migration load: the role of genetic skew. Evolution; International Journal of Organic Evolution. 63: 2926-38. PMID 19619220 DOI: 10.1111/J.1558-5646.2009.00773.X  0.624
2008 Aitken SN, Yeaman S, Holliday JA, Wang T, Curtis-McLane S. Adaptation, migration or extirpation: climate change outcomes for tree populations. Evolutionary Applications. 1: 95-111. PMID 25567494 DOI: 10.1111/J.1752-4571.2007.00013.X  0.8
2007 Whitlock MC, Davis BH, Yeaman S. The costs and benefits of resource sharing: reciprocity requires resource heterogeneity. Journal of Evolutionary Biology. 20: 1772-82. PMID 17714295 DOI: 10.1111/J.1420-9101.2007.01387.X  0.608
2006 Currat M, Excoffier L, Maddison W, Otto SP, Ray N, Whitlock MC, Yeaman S. Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens" and "Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans". Science (New York, N.Y.). 313: 172; author reply 17. PMID 16840683 DOI: 10.1126/Science.1122712  0.612
2006 Yeaman S, Jarvis A. Regional heterogeneity and gene flow maintain variance in a quantitative trait within populations of lodgepole pine. Proceedings. Biological Sciences / the Royal Society. 273: 1587-93. PMID 16769628 DOI: 10.1098/Rspb.2006.3498  0.485
2005 Jarvis A, Yeaman S, Guarino L, Tohme J. The role of geographic analysis in locating, understanding, and using plant genetic diversity. Methods in Enzymology. 395: 279-98. PMID 15865973 DOI: 10.1016/S0076-6879(05)95017-9  0.397
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