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Jeanine F. Amacher, Ph.D. - Publications

Affiliations: 
2014 Biochemistry Dartmouth College, Hanover, NH, United States 
Area:
Biochemistry, Cell Biology, General Chemistry
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18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Vogel BA, Blount JM, Kodama HM, Goodwin-Rice NJ, Andaluz DJ, Jackson SN, Antos JM, Amacher JF. A unique binding mode of P1' Leu-containing target sequences for sortase A results in alternative cleavage. Rsc Chemical Biology. 5: 30-40. PMID 38179192 DOI: 10.1039/d3cb00129f  0.404
2023 Tahti EF, Blount JM, Jackson SN, Gao M, Gill NP, Smith SN, Pederson NJ, Rumph SN, Struyvenberg SA, Mackley IGP, Madden DR, Amacher JF. Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets. Protein Science : a Publication of the Protein Society. e4611. PMID 36851847 DOI: 10.1002/pro.4611  0.769
2023 Tahti EF, Blount JM, Jackson SN, Gao M, Gill NP, Smith SN, Pederson NJ, Rumph SN, Struyvenberg SA, Mackley IGP, Madden DR, Amacher JF. Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets. Biorxiv : the Preprint Server For Biology. PMID 36711692 DOI: 10.1101/2022.12.31.522388  0.771
2021 Gao M, Johnson DA, Piper IM, Kodama HM, Svendsen JE, Tahti E, Longshore-Neate F, Vogel B, Antos JM, Amacher JF. Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes. Protein Science : a Publication of the Protein Society. PMID 34939250 DOI: 10.1002/pro.4266  0.31
2021 Wofford HA, Myers-Dean J, Vogel BA, Alamo KAE, Longshore-Neate FA, Jagodzinski F, Amacher JF. Domain Analysis and Motif Matcher (DAMM): A Program to Predict Selectivity Determinants in PDZ Domains Using Human PDZ Data. Molecules (Basel, Switzerland). 26. PMID 34641578 DOI: 10.3390/molecules26196034  0.574
2020 Gao M, Mackley IGP, Mesbahi-Vasey S, Bamonte HA, Struyvenberg SA, Landolt L, Pederson NJ, Williams LI, Bahl CD, Brooks L, Amacher JF. Structural Characterization and Computational Analysis of PDZ domains in Monosiga brevicollis. Protein Science : a Publication of the Protein Society. PMID 32914530 DOI: 10.1002/Pro.3947  0.754
2020 Amacher JF, Brooks L, Hampton TH, Madden DR. Specificity in PDZ-peptide interaction networks: Computational analysis and review. Journal of Structural Biology: X. 4: 100022. PMID 32289118 DOI: 10.1016/j.yjsbx.2020.100022  0.723
2019 Valgardson J, Cosbey R, Houser P, Rupp M, Van Bronkhorst R, Lee M, Jagodzinski F, Amacher JF. MotifAnalyzer-PDZ: A computational program to investigate the evolution of PDZ-binding target specificity. Protein Science : a Publication of the Protein Society. PMID 31599029 DOI: 10.1002/Pro.3741  0.546
2018 Shah NH, Amacher JF, Nocka LM, Kuriyan J. The Src module: an ancient scaffold in the evolution of cytoplasmic tyrosine kinases. Critical Reviews in Biochemistry and Molecular Biology. 1-29. PMID 30183386 DOI: 10.1080/10409238.2018.1495173  0.382
2018 Amacher JF, Zhong F, Lisi GP, Zhu MQ, Alden SL, Hoke KR, Madden DR, Pletneva EV. Correction to "A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch". Journal of the American Chemical Society. PMID 29553265 DOI: 10.1021/jacs.8b02708  0.573
2018 Amacher JF, Hobbs HT, Cantor AC, Shah L, Rivero MJ, Mulchand SA, Kuriyan J. Phosphorylation Control of the Ubiquitin Ligase Cbl is Conserved in Choanoflagellates. Protein Science : a Publication of the Protein Society. PMID 29498112 DOI: 10.1002/Pro.3397  0.382
2017 Courtney AH, Amacher JF, Kadlecek TA, Mollenauer MN, Au-Yeung BB, Kuriyan J, Weiss A. A Phosphosite within the SH2 Domain of Lck Regulates Its Activation by CD45. Molecular Cell. PMID 28735895 DOI: 10.1016/J.Molcel.2017.06.024  0.407
2015 Amacher JF, Zhong F, Lisi GP, Zhu MQ, Alden SL, Hoke KR, Madden DR, Pletneva EV. A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch. Journal of the American Chemical Society. PMID 26038984 DOI: 10.1021/Jacs.5B01493  0.671
2015 Qian Z, Xu X, Amacher JF, Madden DR, Cormet-Boyaka E, Pei D. Intracellular Delivery of Peptidyl Ligands by Reversible Cyclization: Discovery of a PDZ Domain Inhibitor that Rescues CFTR Activity. Angewandte Chemie (International Ed. in English). 54: 5874-8. PMID 25785567 DOI: 10.1002/Anie.201411594  0.699
2014 Amacher JF, Zhao R, Spaller MR, Madden DR. Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain. Plos One. 9: e103650. PMID 25136860 DOI: 10.1371/Journal.Pone.0103650  0.784
2014 Amacher JF, Cushing PR, Brooks L, Boisguerin P, Madden DR. Stereochemical preferences modulate affinity and selectivity among five PDZ domains that bind CFTR: comparative structural and sequence analyses. Structure (London, England : 1993). 22: 82-93. PMID 24210758 DOI: 10.1016/J.Str.2013.09.019  0.753
2013 Amacher JF, Cushing PR, Bahl CD, Beck T, Madden DR. Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop. The Journal of Biological Chemistry. 288: 5114-26. PMID 23243314 DOI: 10.1074/Jbc.M112.401588  0.688
2011 Amacher JF, Cushing PR, Weiner JA, Madden DR. Crystallization and preliminary diffraction analysis of the CAL PDZ domain in complex with a selective peptide inhibitor. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 600-3. PMID 21543871 DOI: 10.1107/S1744309111009985  0.713
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