Year |
Citation |
Score |
2021 |
Chowdhury R, Wang Y, Campbell M, Goderie SK, Doyle F, Tenenbaum SA, Kusek G, Kiehl TR, Ansari SA, Boles NC, Temple S. STAU2 binds a complex RNA cargo that changes temporally with production of diverse intermediate progenitor cells during mouse corticogenesis. Development (Cambridge, England). 148. PMID 34345913 DOI: 10.1242/dev.199376 |
0.362 |
|
2021 |
Chowdhury R, Wang Y, Campbell M, Goderie S, Doyle F, Tenenbaum SA, Kusek G, Kiehl TR, Ansari S, Boles NC, Temple S. STAU2 binds a Complex RNA Cargo that changes temporally with production of diverse intermediate progenitor cells during mouse corticogenesis. Development (Cambridge, England). PMID 34269792 DOI: 10.1242/dev.199376 |
0.362 |
|
2017 |
Huang K, Doyle F, Wurz ZE, Tenenbaum SA, Hammond RK, Caplan JL, Meyers BC. FASTmiR: an RNA-based sensor for in vitro quantification and live-cell localization of small RNAs. Nucleic Acids Research. PMID 28586459 DOI: 10.1093/Nar/Gkx504 |
0.469 |
|
2017 |
Doyle F, Lapsia S, Spadaro S, Wurz ZE, Bhaduri-McIntosh S, Tenenbaum SA. Engineering Structurally Interacting RNA (sxRNA). Scientific Reports. 7: 45393. PMID 28350000 DOI: 10.1038/Srep45393 |
0.546 |
|
2016 |
Doyle F, Leonardi A, Endres L, Tenenbaum SA, Dedon PC, Begley TJ. Gene- and Genome-Based Analysis of Significant Codon Patterns in Yeast, Rat and Mice Genomes with the CUT Codon Utilization Tool. Methods (San Diego, Calif.). PMID 27245397 DOI: 10.1016/J.Ymeth.2016.05.010 |
0.371 |
|
2015 |
Cassar PA, Carpenedo RL, Samavarchi-Tehrani P, Olsen JB, Park CJ, Chang WY, Chen Z, Choey C, Delaney S, Guo H, Guo H, Tanner RM, Perkins TJ, Tenenbaum SA, Emili A, et al. Integrative genomics positions MKRN1 as a novel ribonucleoprotein within the embryonic stem cell gene regulatory network. Embo Reports. 16: 1334-57. PMID 26265008 DOI: 10.15252/Embr.201540974 |
0.368 |
|
2015 |
Schmidt SA, Foley PL, Jeong DH, Rymarquis LA, Doyle F, Tenenbaum SA, Belasco JG, Green PJ. Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells. Nucleic Acids Research. 43: 309-23. PMID 25429978 DOI: 10.1093/Nar/Gku1258 |
0.419 |
|
2014 |
Stephenson W, Wan G, Tenenbaum SA, Li PT. Nanomanipulation of single RNA molecules by optical tweezers. Journal of Visualized Experiments : Jove. PMID 25177917 DOI: 10.3791/51542 |
0.736 |
|
2014 |
Doyle F, Tenenbaum SA. Trans-regulation of RNA-binding protein motifs by microRNA. Frontiers in Genetics. 5: 79. PMID 24795744 DOI: 10.3389/Fgene.2014.00079 |
0.554 |
|
2014 |
Stephenson W, Keller S, Santiago R, Albrecht JE, Asare-Okai PN, Tenenbaum SA, Zuker M, Li PT. Combining temperature and force to study folding of an RNA hairpin. Physical Chemistry Chemical Physics : Pccp. 16: 906-17. PMID 24276015 DOI: 10.1039/C3Cp52042K |
0.722 |
|
2014 |
Jayaseelan S, Doyle F, Tenenbaum SA. Profiling post-transcriptionally networked mRNA subsets using RIP-Chip and RIP-Seq. Methods (San Diego, Calif.). 67: 13-9. PMID 24257445 DOI: 10.1016/J.Ymeth.2013.11.001 |
0.516 |
|
2014 |
Stephenson W, Asare-Okai PN, Tenenbaum S, Fabris D, Li PT. Comparing RNA Kissing Interactions at Single-Molecule and Ensemble Levels Biophysical Journal. 106: 283a-284a. DOI: 10.1016/J.Bpj.2013.11.1659 |
0.498 |
|
2014 |
Stephenson WT, Keller S, Tenenbaum SA, Zuker M, Li PT. Structural Polymorphism of (Cag)N Repeat RNA Elucidated using Single Molecule Nanomanipulation Biophysical Journal. 106: 282a. DOI: 10.1016/J.Bpj.2013.11.1653 |
0.733 |
|
2013 |
Stephenson W, Asare-Okai PN, Chen AA, Keller S, Santiago R, Tenenbaum SA, Garcia AE, Fabris D, Li PT. The essential role of stacking adenines in a two-base-pair RNA kissing complex. Journal of the American Chemical Society. 135: 5602-11. PMID 23517345 DOI: 10.1021/Ja310820H |
0.721 |
|
2013 |
Li PT, Stephenson W, Nii Asare-Okai P, Chen AA, Tenenbaum S, Garcia AE, Fabris D. The Essential Adenosine Stacking in a Two-Base-Pair Minimal Kissing Complex Biophysical Journal. 104: 411a. DOI: 10.1080/07391102.2013.786474 |
0.68 |
|
2013 |
Stephenson W, Santiago R, Keller S, Tenenbaum S, Zuker M, Li PT. 40 Probing single molecule RNA folding using temperature and force Journal of Biomolecular Structure and Dynamics. 31: 24-25. DOI: 10.1080/07391102.2013.786473 |
0.695 |
|
2013 |
Stephenson WT, Santiago R, Keller S, Tenenbaum S, Zuker M, Li PT. Combining Temperature and Force to Study Folding of Single RNA Molecules Biophysical Journal. 104: 412a. DOI: 10.1016/J.Bpj.2012.11.2296 |
0.694 |
|
2012 |
Jayaseelan S, Tenenbaum SA. Neurodevelopmental disorders: Signalling pathways of fragile X syndrome. Nature. 492: 359-60. PMID 23235826 DOI: 10.1038/Nature11764 |
0.391 |
|
2012 |
Kusek G, Campbell M, Doyle F, Tenenbaum SA, Kiebler M, Temple S. Asymmetric segregation of the double-stranded RNA binding protein Staufen2 during mammalian neural stem cell divisions promotes lineage progression. Cell Stem Cell. 11: 505-16. PMID 22902295 DOI: 10.1016/J.Stem.2012.06.006 |
0.414 |
|
2012 |
Lin Y, Li Z, Ozsolak F, Kim SW, Arango-Argoty G, Liu TT, Tenenbaum SA, Bailey T, Monaghan AP, Milos PM, John B. An in-depth map of polyadenylation sites in cancer. Nucleic Acids Research. 40: 8460-71. PMID 22753024 DOI: 10.1093/Nar/Gks637 |
0.395 |
|
2012 |
Lapidus KA, Nwokafor C, Scott D, Baroni TE, Tenenbaum SA, Hiroi N, Singer RH, Czaplinski K. Transgenic expression of ZBP1 in neurons suppresses cocaine-associated conditioning. Learning & Memory (Cold Spring Harbor, N.Y.). 19: 35-42. PMID 22240322 DOI: 10.1101/Lm.024471.111 |
0.359 |
|
2011 |
Shukla GC, Haque F, Tor Y, Wilhelmsson LM, Toulmé JJ, Isambert H, Guo P, Rossi JJ, Tenenbaum SA, Shapiro BA. A boost for the emerging field of RNA nanotechnology. Acs Nano. 5: 3405-18. PMID 21604810 DOI: 10.1021/Nn200989R |
0.484 |
|
2011 |
Jayaseelan S, Doyle F, Currenti S, Tenenbaum SA. RIP: an mRNA localization technique. Methods in Molecular Biology (Clifton, N.J.). 714: 407-22. PMID 21431755 DOI: 10.1007/978-1-61779-005-8_25 |
0.477 |
|
2011 |
Jain R, Devine T, George AD, Chittur SV, Baroni TE, Penalva LO, Tenenbaum SA. RIP-Chip analysis: RNA-Binding Protein Immunoprecipitation-Microarray (Chip) Profiling. Methods in Molecular Biology (Clifton, N.J.). 703: 247-63. PMID 21125495 DOI: 10.1007/978-1-59745-248-9_17 |
0.636 |
|
2011 |
Tenenbaum SA, Christiansen J, Nielsen H. The post-transcriptional operon. Methods in Molecular Biology (Clifton, N.J.). 703: 237-45. PMID 21125494 DOI: 10.1007/978-1-59745-248-9_16 |
0.462 |
|
2011 |
George AD, Tenenbaum SA. Web-based tools for studying RNA structure and function. Methods in Molecular Biology (Clifton, N.J.). 703: 67-86. PMID 21125484 DOI: 10.1007/978-1-59745-248-9_6 |
0.68 |
|
2010 |
Jain R, Doyle F, George AD, Kuentzel M, Frank D, Chittur SV, Tenenbaum SA. RIP-CHIP in drug development. Methods in Molecular Biology (Clifton, N.J.). 632: 159-71. PMID 20217577 DOI: 10.1007/978-1-60761-663-4_10 |
0.538 |
|
2009 |
George AD, Tenenbaum SA. Informatic resources for identifying and annotating structural RNA motifs. Molecular Biotechnology. 41: 180-93. PMID 18979204 DOI: 10.1007/S12033-008-9114-Z |
0.672 |
|
2008 |
Baroni TE, Chittur SV, George AD, Tenenbaum SA. Advances in RIP-chip analysis : RNA-binding protein immunoprecipitation-microarray profiling. Methods in Molecular Biology (Clifton, N.J.). 419: 93-108. PMID 18369977 DOI: 10.1007/978-1-59745-033-1_6 |
0.663 |
|
2008 |
Doyle F, Zaleski C, George AD, Stenson EK, Ricciardi A, Tenenbaum SA. Bioinformatic tools for studying post-transcriptional gene regulation : The UAlbany TUTR collection and other informatic resources. Methods in Molecular Biology (Clifton, N.J.). 419: 39-52. PMID 18369974 DOI: 10.1007/978-1-59745-033-1_3 |
0.645 |
|
2008 |
Stoecklin G, Tenenbaum SA, Mayo T, Chittur SV, George AD, Baroni TE, Blackshear PJ, Anderson P. Genome-wide analysis identifies interleukin-10 mRNA as target of tristetraprolin. The Journal of Biological Chemistry. 283: 11689-99. PMID 18256032 DOI: 10.1074/Jbc.M709657200 |
0.622 |
|
2008 |
Mazroui R, Di Marco S, Clair E, von Roretz C, Tenenbaum SA, Keene JD, Saleh M, Gallouzi IE. Caspase-mediated cleavage of HuR in the cytoplasm contributes to pp32/PHAP-I regulation of apoptosis. The Journal of Cell Biology. 180: 113-27. PMID 18180367 DOI: 10.1083/Jcb.200709030 |
0.41 |
|
2007 |
Baroni TE, Lastro MT, Ranganathan AC, Tenenbaum SA, Conklin DS, Aguirre-Ghiso JA. Ribonomic and short hairpin RNA gene silencing methods to explore functional gene programs associated with tumor growth arrest. Methods in Molecular Biology (Clifton, N.J.). 383: 227-44. PMID 18217689 DOI: 10.1007/978-1-59745-335-6_15 |
0.459 |
|
2006 |
George AD, Tenenbaum SA. MicroRNA modulation of RNA-binding protein regulatory elements. Rna Biology. 3: 57-9. PMID 17114943 DOI: 10.4161/Rna.3.2.3250 |
0.623 |
|
2005 |
Di Marco S, Mazroui R, Dallaire P, Chittur S, Tenenbaum SA, Radzioch D, Marette A, Gallouzi IE. NF-kappa B-mediated MyoD decay during muscle wasting requires nitric oxide synthase mRNA stabilization, HuR protein, and nitric oxide release. Molecular and Cellular Biology. 25: 6533-45. PMID 16024790 DOI: 10.1128/Mcb.25.15.6533-6545.2005 |
0.306 |
|
2004 |
Penalva LO, Tenenbaum SA, Keene JD. Gene expression analysis of messenger RNP complexes. Methods in Molecular Biology (Clifton, N.J.). 257: 125-34. PMID 14770002 DOI: 10.1385/1-59259-750-5:125 |
0.521 |
|
2003 |
Intine RV, Tenenbaum SA, Sakulich AL, Keene JD, Maraia RJ. Differential phosphorylation and subcellular localization of La RNPs associated with precursor tRNAs and translation-related mRNAs. Molecular Cell. 12: 1301-7. PMID 14636586 DOI: 10.1016/S1097-2765(03)00429-5 |
0.48 |
|
2003 |
Tenenbaum SA, Carson CC, Atasoy U, Keene JD. Genome-wide regulatory analysis using en masse nuclear run-ons and ribonomic profiling with autoimmune sera. Gene. 317: 79-87. PMID 14604794 DOI: 10.1016/S0378-1119(03)00661-9 |
0.376 |
|
2002 |
Keene JD, Tenenbaum SA. Eukaryotic mRNPs may represent posttranscriptional operons. Molecular Cell. 9: 1161-7. PMID 12086614 DOI: 10.1016/S1097-2765(02)00559-2 |
0.378 |
|
2002 |
Tenenbaum SA, Lager PJ, Carson CC, Keene JD. Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays. Methods (San Diego, Calif.). 26: 191-8. PMID 12054896 DOI: 10.1016/S1046-2023(02)00022-1 |
0.456 |
|
2002 |
Eystathioy T, Chan EK, Tenenbaum SA, Keene JD, Griffith K, Fritzler MJ. A phosphorylated cytoplasmic autoantigen, GW182, associates with a unique population of human mRNAs within novel cytoplasmic speckles. Molecular Biology of the Cell. 13: 1338-51. PMID 11950943 DOI: 10.1091/Mbc.01-11-0544 |
0.457 |
|
2001 |
Brown V, Jin P, Ceman S, Darnell JC, O'Donnell WT, Tenenbaum SA, Jin X, Feng Y, Wilkinson KD, Keene JD, Darnell RB, Warren ST. Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome. Cell. 107: 477-87. PMID 11719188 DOI: 10.1016/S0092-8674(01)00568-2 |
0.386 |
|
2000 |
Tenenbaum SA, Carson CC, Lager PJ, Keene JD. Identifying mRNA subsets in messenger ribonucleoprotein complexes by using cDNA arrays. Proceedings of the National Academy of Sciences of the United States of America. 97: 14085-90. PMID 11121017 DOI: 10.1073/Pnas.97.26.14085 |
0.421 |
|
1997 |
Scandurro AB, Rondon IJ, Wilson RB, Tenenbaum SA, Garry RF, Beckman BS. Interaction of erythropoietin RNA binding protein with erythropoietin RNA requires an association with heat shock protein 70. Kidney International. 51: 579-84. PMID 9027743 DOI: 10.1038/Ki.1997.83 |
0.462 |
|
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