Year |
Citation |
Score |
2023 |
Mersch KN, Sokoloski JE, Nguyen B, Galletto R, Lohman TM. "Helicase" Activity promoted through dynamic interactions between a ssDNA translocase and a diffusing SSB protein. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216777120. PMID 37011199 DOI: 10.1073/pnas.2216777120 |
0.549 |
|
2023 |
Ashour ME, Byrum AK, Meroni A, Xia J, Singh S, Galletto R, Rosenberg SM, Vindigni A, Mosammaparast N. Rapid profiling of DNA replication dynamics using mass spectrometry-based analysis of nascent DNA. The Journal of Cell Biology. 222. PMID 36795402 DOI: 10.1083/jcb.202207121 |
0.34 |
|
2022 |
Soranno A, Jeremías Incicco J, De Bona P, Eric Tomko J, Eric Galburt A, Alex Holehouse S, Galletto R. Shelterin components modulate nucleic acids condensation and phase separation in the context of telomeric DNA. Journal of Molecular Biology. 167685. PMID 35724929 DOI: 10.1016/j.jmb.2022.167685 |
0.419 |
|
2020 |
Sparks MA, Burgers PM, Galletto R. Pif1, RPA and FEN1 modulate the ability of DNA polymerase δ to overcome protein barriers during DNA synthesis. The Journal of Biological Chemistry. PMID 32913126 DOI: 10.1074/Jbc.Ra120.015699 |
0.533 |
|
2019 |
Singh SP, Soranno A, Sparks MA, Galletto R. Branched unwinding mechanism of the Pif1 family of DNA helicases. Proceedings of the National Academy of Sciences of the United States of America. PMID 31744872 DOI: 10.1073/Pnas.1915654116 |
0.513 |
|
2019 |
Hailemariam S, De Bona P, Galletto R, Hohl M, Petrini JH, Burgers PM. The telomere-binding protein Rif2 and ATP-bound Rad50 have opposing roles in the activation of yeast Tel1 kinase. The Journal of Biological Chemistry. PMID 31640985 DOI: 10.1074/Jbc.Ra119.011077 |
0.408 |
|
2019 |
Sparks MA, Singh SP, Burgers PM, Galletto R. Complementary roles of Pif1 helicase and single stranded DNA binding proteins in stimulating DNA replication through G-quadruplexes. Nucleic Acids Research. PMID 31340040 DOI: 10.1093/Nar/Gkz608 |
0.487 |
|
2019 |
Singh SP, Kukshal V, Galletto R. A stable tetramer is not the only oligomeric state that mitochondrial single-stranded DNA binding proteins can adopt. The Journal of Biological Chemistry. PMID 30617184 DOI: 10.1074/Jbc.Ra118.007048 |
0.614 |
|
2019 |
Mondol T, Stodola JL, Galletto R, Burgers PM. PCNA accelerates the nucleotide incorporation rate by DNA polymerase δ. Nucleic Acids Research. PMID 30605530 DOI: 10.1093/Nar/Gky1321 |
0.593 |
|
2018 |
Dahan D, Tsirkas I, Dovrat D, Sparks MA, Singh SP, Galletto R, Aharoni A. Pif1 is essential for efficient replisome progression through lagging strand G-quadruplex DNA secondary structures. Nucleic Acids Research. PMID 30395308 DOI: 10.1093/Nar/Gky1065 |
0.355 |
|
2018 |
Geronimo CL, Singh SP, Galletto R, Zakian VA. The signature motif of the Saccharomyces cerevisiae Pif1 DNA helicase is essential in vivo for mitochondrial and nuclear functions and in vitro for ATPase activity. Nucleic Acids Research. 46: 8357-8370. PMID 30239884 DOI: 10.1093/Nar/Gky655 |
0.429 |
|
2018 |
Singh SP, Kukshal V, De Bona P, Antony E, Galletto R. The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers. Nucleic Acids Research. PMID 29931186 DOI: 10.1093/Nar/Gky530 |
0.635 |
|
2017 |
Sokoloski JE, Galletto R, Lohman TM. Superfamily 1 Helicase PIF1 Can Push Replication Protein a Along Single Stranded DNA and into Duplex DNA Biophysical Journal. 112: 372a. DOI: 10.1016/J.Bpj.2016.11.2020 |
0.617 |
|
2016 |
Sokoloski JE, Kozlov AG, Galletto R, Lohman TM. Chemo-mechanical pushing of proteins along single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. PMID 27185951 DOI: 10.1073/Pnas.1602878113 |
0.617 |
|
2016 |
Koc KN, Singh SP, Stodola JL, Burgers PM, Galletto R. Pif1 removes a Rap1-dependent barrier to the strand displacement activity of DNA polymerase δ. Nucleic Acids Research. PMID 27001517 DOI: 10.1093/Nar/Gkw181 |
0.518 |
|
2016 |
Singh SP, Koc KN, Stodola JL, Galletto R. A monomer of Pif1 unwinds double-stranded DNA and it is regulated by the nature of the non-translocating strand at the 3'-end. Journal of Molecular Biology. PMID 26908222 DOI: 10.1016/J.Jmb.2016.02.017 |
0.563 |
|
2016 |
Sokoloski JE, Kozlov A, Galletto R, Lohman TM. Single Stranded DNA Translocases can Push Single Stranded DNA Binding Proteins along Single Stranded DNA Biophysical Journal. 110: 240a. DOI: 10.1016/J.Bpj.2015.11.1321 |
0.607 |
|
2015 |
Koc KN, Stodola JL, Burgers PM, Galletto R. Regulation of yeast DNA polymerase δ-mediated strand displacement synthesis by 5'-flaps. Nucleic Acids Research. 43: 4179-90. PMID 25813050 DOI: 10.1093/Nar/Gkv260 |
0.574 |
|
2015 |
Feldmann EA, De Bona P, Galletto R. The wrapping loop and Rap1 C-terminal (RCT) domain of yeast Rap1 modulate access to different DNA binding modes. The Journal of Biological Chemistry. 290: 11455-66. PMID 25805496 DOI: 10.1074/Jbc.M115.637678 |
0.636 |
|
2015 |
Feldmann EA, Koc KN, Galletto R. Alternative arrangements of telomeric recognition sites regulate the binding mode of the DNA-binding domain of yeast Rap1. Biophysical Chemistry. 198: 1-8. PMID 25637888 DOI: 10.1016/J.Bpc.2015.01.002 |
0.615 |
|
2014 |
Feldmann EA, Galletto R. The DNA-binding domain of yeast Rap1 interacts with double-stranded DNA in multiple binding modes. Biochemistry. 53: 7471-83. PMID 25382181 DOI: 10.1021/Bi501049B |
0.651 |
|
2014 |
Nguyen B, Sokoloski J, Galletto R, Elson EL, Wold MS, Lohman TM. Diffusion of human replication protein A along single-stranded DNA. Journal of Molecular Biology. 426: 3246-61. PMID 25058683 DOI: 10.1016/J.Jmb.2014.07.014 |
0.538 |
|
2014 |
Nguyen B, Sokoloski J, Wold MS, Galletto R, Elson EL, Lohman TM. Human Replication Protein a (RPA) Can Diffuse Along Single Stranded DNA Biophysical Journal. 106: 73a. DOI: 10.1016/J.Bpj.2013.11.480 |
0.573 |
|
2013 |
Galletto R, Tomko EJ. Translocation of Saccharomyces cerevisiae Pif1 helicase monomers on single-stranded DNA. Nucleic Acids Research. 41: 4613-27. PMID 23446274 DOI: 10.1093/Nar/Gkt117 |
0.564 |
|
2012 |
Kozlov AG, Galletto R, Lohman TM. SSB-DNA binding monitored by fluorescence intensity and anisotropy. Methods in Molecular Biology (Clifton, N.J.). 922: 55-83. PMID 22976177 DOI: 10.1007/978-1-62703-032-8_4 |
0.623 |
|
2010 |
Barranco-Medina S, Galletto R. DNA binding induces dimerization of Saccharomyces cerevisiae Pif1. Biochemistry. 49: 8445-54. PMID 20795654 DOI: 10.1021/Bi100984J |
0.653 |
|
2010 |
Updegrove TB, Correia JJ, Galletto R, Bujalowski W, Wartell RM. E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain. Biochimica Et Biophysica Acta. 1799: 588-96. PMID 20619373 DOI: 10.1016/J.Bbagrm.2010.06.007 |
0.749 |
|
2009 |
Andreeva IE, Szymanski MR, Jezewska MJ, Galletto R, Bujalowski W. Dynamics of the ssDNA recognition by the RepA hexameric helicase of plasmid RSF1010: analyses using fluorescence stopped-flow intensity and anisotropy methods. Journal of Molecular Biology. 388: 751-75. PMID 19289128 DOI: 10.1016/J.Jmb.2009.03.027 |
0.771 |
|
2007 |
Galletto R, Kowalczykowski SC. RecA Current Biology. 17: R395-R397. PMID 17550759 DOI: 10.1016/j.cub.2007.03.009 |
0.334 |
|
2006 |
Galletto R, Amitani I, Baskin RJ, Kowalczykowski SC. Direct observation of individual RecA filaments assembling on single DNA molecules Nature. 443: 875-878. PMID 16988658 DOI: 10.1038/Nature05197 |
0.527 |
|
2005 |
Galletto R, Jezewska MJ, Maillard R, Bujalowski W. The nucleotide-binding site of the Escherichia coli DnaC protein: molecular topography of DnaC protein-nucleotide cofactor complexes. Cell Biochemistry and Biophysics. 43: 331-53. PMID 16244362 DOI: 10.1385/Cbb:43:3:331 |
0.732 |
|
2005 |
Galletto R, Jezewska MJ, Bujalowski W. Kinetics of allosteric conformational transition of a macromolecule prior to ligand binding: analysis of stopped-flow kinetic experiments. Cell Biochemistry and Biophysics. 42: 121-44. PMID 15858229 DOI: 10.1385/Cbb:42:2:121 |
0.68 |
|
2005 |
Galletto R, Jezewska MJ, Bujalowski W. Kinetic mechanism of rat polymerase beta-dsDNA interactions. Fluorescence stopped-flow analysis of the cooperative ligand binding to a two-site one-dimensional lattice. Biochemistry. 44: 1251-67. PMID 15667219 DOI: 10.1021/Bi0487037 |
0.756 |
|
2004 |
Jezewska MJ, Galletto R, Bujalowski W. Interactions of the RepA helicase hexamer of plasmid RSF1010 with the ssDNA. Quantitative analysis of stoichiometries, intrinsic affinities, cooperativities, and heterogeneity of the total ssDNA-binding site. Journal of Molecular Biology. 343: 115-36. PMID 15381424 DOI: 10.1016/J.Jmb.2004.08.021 |
0.735 |
|
2004 |
Galletto R, Jezewska MJ, Bujalowski W. Unzipping mechanism of the double-stranded DNA unwinding by a hexameric helicase: the effect of the 3' arm and the stability of the dsDNA on the unwinding activity of the Escherichia coli DnaB helicase. Journal of Molecular Biology. 343: 101-14. PMID 15381423 DOI: 10.1016/J.Jmb.2004.07.056 |
0.734 |
|
2004 |
Galletto R, Jezewska MJ, Bujalowski W. Unzipping mechanism of the double-stranded DNA unwinding by a hexameric helicase: quantitative analysis of the rate of the dsDNA unwinding, processivity and kinetic step-size of the Escherichia coli DnaB helicase using rapid quench-flow method. Journal of Molecular Biology. 343: 83-99. PMID 15381422 DOI: 10.1016/J.Jmb.2004.07.055 |
0.727 |
|
2004 |
Galletto R, Jezewska MJ, Bujalowski W. Multistep sequential mechanism of Escherichia coli helicase PriA protein-ssDNA interactions. Kinetics and energetics of the active ssDNA-searching site of the enzyme. Biochemistry. 43: 11002-16. PMID 15323559 DOI: 10.1021/Bi049378Q |
0.778 |
|
2004 |
Galletto R, Maillard R, Jezewska MJ, Bujalowski W. Global conformation of the Escherichia coli replication factor DnaC protein in absence and presence of nucleotide cofactors. Biochemistry. 43: 10988-1001. PMID 15323558 DOI: 10.1021/Bi049377Y |
0.703 |
|
2003 |
Jezewska MJ, Galletto R, Bujalowski W. Tertiary conformation of the template-primer and gapped DNA substrates in complexes with rat polymerase beta. Fluorescence energy transfer studies using the multiple donor-acceptor approach. Biochemistry. 42: 11864-78. PMID 14529299 DOI: 10.1021/Bi030111L |
0.732 |
|
2003 |
Jezewska MJ, Galletto R, Bujalowski W. Rat polymerase beta gapped DNA interactions: antagonistic effects of the 5' terminal PO4 - group and magnesium on the enzyme binding to the gapped DNAs with different ssDNA gaps. Cell Biochemistry and Biophysics. 38: 125-60. PMID 12777712 DOI: 10.1385/Cbb:38:2:125 |
0.746 |
|
2003 |
Galletto R, Jezewska MJ, Bujalowski W. Interactions of the Escherichia coli DnaB helicase hexamer with the replication factor the DnaC protein. Effect of nucleotide cofactors and the ssDNA on protein-protein interactions and the topology of the complex. Journal of Molecular Biology. 329: 441-65. PMID 12767828 DOI: 10.1016/S0022-2836(03)00435-2 |
0.757 |
|
2003 |
Jezewska MJ, Galletto R, Bujalowski W. Rat polymerase beta binds double-stranded DNA using exclusively the 8-kDa domain. Stoichiometries, intrinsic affinities, and cooperativities. Biochemistry. 42: 5955-70. PMID 12741854 DOI: 10.1021/Bi030046F |
0.734 |
|
2002 |
Galletto R, Bujalowski W. Kinetics of the E. coli replication factor DnaC protein-nucleotide interactions. II. Fluorescence anisotropy and transient, dynamic quenching stopped-flow studies of the reaction intermediates. Biochemistry. 41: 8921-34. PMID 12102634 DOI: 10.1021/Bi020127W |
0.729 |
|
2002 |
Galletto R, Bujalowski W. The E. coli replication factor DnaC protein exists in two conformations with different nucleotide binding capabilities. I. Determination of the binding mechanism using ATP and ADP fluorescent analogues. Biochemistry. 41: 8907-20. PMID 12102633 DOI: 10.1021/Bi0201264 |
0.737 |
|
2002 |
Jezewska MJ, Galletto R, Bujalowski W. Dynamics of gapped DNA recognition by human polymerase beta. The Journal of Biological Chemistry. 277: 20316-27. PMID 11912205 DOI: 10.1074/Jbc.M200918200 |
0.747 |
|
2001 |
Jezewska MJ, Rajendran S, Galletto R, Bujalowski W. Kinetic mechanisms of rat polymerase beta-ssDNA interactions. Quantitative fluorescence stopped-flow analysis of the formation of the (Pol beta)(16) and (Pol beta)(5) ssDNA binding mode. Journal of Molecular Biology. 313: 977-1002. PMID 11700054 DOI: 10.1006/Jmbi.2001.5042 |
0.73 |
|
2000 |
Galletto R, Rajendran S, Bujalowski W. Interactions of nucleotide cofactors with the Escherichia coli replication factor DnaC protein. Biochemistry. 39: 12959-69. PMID 11041861 DOI: 10.1021/Bi0012484 |
0.75 |
|
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