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Elizabeth J. Grayhack - Publications

Affiliations: 
University of Rochester, Rochester, NY 
Area:
Biochemistry, Molecular Biology
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Houston L, Platten EM, Connelly SM, Wang J, Grayhack EJ. Frameshifting at collided ribosomes is modulated by elongation factor eEF3 and by integrated stress response regulators Gcn1 and Gcn20. Rna (New York, N.Y.). 28: 320-339. PMID 34916334 DOI: 10.1261/rna.078964.121  0.455
2018 Ghoneim DH, Zhang X, Brule CE, Mathews DH, Grayhack EJ. Conservation of location of several specific inhibitory codon pairs in the Saccharomyces sensu stricto yeasts reveals translational selection. Nucleic Acids Research. PMID 30576464 DOI: 10.1093/Nar/Gky1262  0.488
2018 Wang J, Zhou J, Yang Q, Grayhack EJ. Multi-protein Bridging Factor 1(Mbf1), Rps3 and Asc1 prevent stalled ribosomes from frameshifting. Elife. 7. PMID 30465652 DOI: 10.7554/Elife.39637  0.529
2018 Coller J, Grayhack EJ. The analysis of translational mechanisms that modulate gene expression. Methods (San Diego, Calif.). 137: 1-2. PMID 29571431 DOI: 10.1016/J.Ymeth.2018.03.005  0.387
2018 Wang J, Zhou J, Yang Q, Grayhack EJ. Author response: Multi-protein bridging factor 1(Mbf1), Rps3 and Asc1 prevent stalled ribosomes from frameshifting Elife. DOI: 10.7554/Elife.39637.031  0.302
2017 Brule CE, Grayhack EJ. Synonymous Codons: Choose Wisely for Expression. Trends in Genetics : Tig. PMID 28292534 DOI: 10.1016/J.Tig.2017.02.001  0.533
2016 Patra B, Kon Y, Yadav G, Sevold AW, Frumkin JP, Vallabhajosyula RR, Hintze A, Østman B, Schossau J, Bhan A, Marzolf B, Tamashiro JK, Kaur A, Baliga NS, Grayhack EJ, et al. A genome wide dosage suppressor network reveals genomic robustness. Nucleic Acids Research. PMID 27899637 DOI: 10.1093/Nar/Gkw1148  0.423
2016 Gamble CE, Brule CE, Dean KM, Fields S, Grayhack EJ. Adjacent Codons Act in Concert to Modulate Translation Efficiency in Yeast. Cell. PMID 27374328 DOI: 10.1016/J.Cell.2016.05.070  0.55
2016 Brule CE, Dean KM, Grayhack EJ. RNA-ID, a Powerful Tool for Identifying and Characterizing Regulatory Sequences. Methods in Enzymology. 572: 237-53. PMID 27241757 DOI: 10.1016/Bs.Mie.2016.02.003  0.438
2015 Quivey RG, Grayhack EJ, Faustoferri RC, Hubbard CJ, Baldeck JD, Wolf AS, MacGilvray ME, Rosalen PL, Scott-Anne K, Santiago B, Gopal S, Payne J, Marquis RE. Functional profiling in Streptococcus mutans: construction and examination of a genomic collection of gene deletion mutants. Molecular Oral Microbiology. PMID 25973955 DOI: 10.1111/Omi.12107  0.327
2015 Wolf AS, Grayhack EJ. Asc1, homolog of human RACK1, prevents frameshifting in yeast by ribosomes stalled at CGA codon repeats. Rna (New York, N.Y.). 21: 935-45. PMID 25792604 DOI: 10.1261/Rna.049080.114  0.564
2014 Guy MP, Young DL, Payea MJ, Zhang X, Kon Y, Dean KM, Grayhack EJ, Mathews DH, Fields S, Phizicky EM. Identification of the determinants of tRNA function and susceptibility to rapid tRNA decay by high-throughput in vivo analysis. Genes & Development. 28: 1721-32. PMID 25085423 DOI: 10.1101/Gad.245936.114  0.5
2013 Letzring DP, Wolf AS, Brule CE, Grayhack EJ. Translation of CGA codon repeats in yeast involves quality control components and ribosomal protein L1. Rna (New York, N.Y.). 19: 1208-17. PMID 23825054 DOI: 10.1261/Rna.039446.113  0.722
2013 Grant TD, Luft JR, Wolfley JR, Snell ME, Tsuruta H, Corretore S, Quartley E, Phizicky EM, Grayhack EJ, Snell EH. The structure of yeast glutaminyl-tRNA synthetase and modeling of its interaction with tRNA. Journal of Molecular Biology. 425: 2480-93. PMID 23583912 DOI: 10.1016/J.Jmb.2013.03.043  0.367
2012 Dean KM, Grayhack EJ. RNA-ID, a highly sensitive and robust method to identify cis-regulatory sequences using superfolder GFP and a fluorescence-based assay. Rna (New York, N.Y.). 18: 2335-44. PMID 23097427 DOI: 10.1261/Rna.035907.112  0.425
2012 Grant TD, Snell EH, Luft JR, Quartley E, Corretore S, Wolfley JR, Snell ME, Hadd A, Perona JJ, Phizicky EM, Grayhack EJ. Structural conservation of an ancient tRNA sensor in eukaryotic glutaminyl-tRNA synthetase. Nucleic Acids Research. 40: 3723-31. PMID 22180531 DOI: 10.1093/Nar/Gkr1223  0.467
2010 Letzring DP, Dean KM, Grayhack EJ. Control of translation efficiency in yeast by codon-anticodon interactions. Rna (New York, N.Y.). 16: 2516-28. PMID 20971810 DOI: 10.1261/Rna.2411710  0.719
2009 Quartley E, Alexandrov A, Mikucki M, Buckner FS, Hol WG, DeTitta GT, Phizicky EM, Grayhack EJ. Heterologous expression of L. major proteins in S. cerevisiae: a test of solubility, purity, and gene recoding. Journal of Structural and Functional Genomics. 10: 233-47. PMID 19701618 DOI: 10.1007/S10969-009-9068-9  0.404
2008 Chernyakov I, Baker MA, Grayhack EJ, Phizicky EM. Chapter 11. Identification and analysis of tRNAs that are degraded in Saccharomyces cerevisiae due to lack of modifications. Methods in Enzymology. 449: 221-37. PMID 19215761 DOI: 10.1016/S0076-6879(08)02411-7  0.745
2008 Jackman JE, Grayhack EJ, Phizicky EM. The use of Saccharomyces cerevisiae proteomic libraries to identify RNA-modifying proteins. Methods in Molecular Biology (Clifton, N.J.). 488: 383-93. PMID 18982304 DOI: 10.1007/978-1-60327-475-3_25  0.401
2008 Chernyakov I, Whipple JM, Kotelawala L, Grayhack EJ, Phizicky EM. Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes & Development. 22: 1369-80. PMID 18443146 DOI: 10.1101/Gad.1654308  0.743
2008 Kotelawala L, Grayhack EJ, Phizicky EM. Identification of yeast tRNA Um(44) 2'-O-methyltransferase (Trm44) and demonstration of a Trm44 role in sustaining levels of specific tRNA(Ser) species. Rna (New York, N.Y.). 14: 158-69. PMID 18025252 DOI: 10.1261/Rna.811008  0.528
2007 Jackman JE, Kotelawala L, Grayhack EJ, Phizicky EM. Identification and characterization of modification enzymes by biochemical analysis of the proteome. Methods in Enzymology. 425: 139-52. PMID 17673082 DOI: 10.1016/S0076-6879(07)25006-2  0.405
2007 Malkowski MG, Quartley E, Friedman AE, Babulski J, Kon Y, Wolfley J, Said M, Luft JR, Phizicky EM, DeTitta GT, Grayhack EJ. Blocking S-adenosylmethionine synthesis in yeast allows selenomethionine incorporation and multiwavelength anomalous dispersion phasing. Proceedings of the National Academy of Sciences of the United States of America. 104: 6678-83. PMID 17426150 DOI: 10.1073/Pnas.0610337104  0.411
2007 Wilkinson ML, Crary SM, Jackman JE, Grayhack EJ, Phizicky EM. The 2'-O-methyltransferase responsible for modification of yeast tRNA at position 4. Rna (New York, N.Y.). 13: 404-13. PMID 17242307 DOI: 10.1261/Rna.399607  0.375
2007 White MA, Clark KM, Grayhack EJ, Dumont ME. Characteristics affecting expression and solubilization of yeast membrane proteins. Journal of Molecular Biology. 365: 621-36. PMID 17078969 DOI: 10.1016/J.Jmb.2006.10.004  0.314
2006 Phizicky EM, Grayhack EJ. Proteome-scale analysis of biochemical activity. Critical Reviews in Biochemistry and Molecular Biology. 41: 315-27. PMID 16911958 DOI: 10.1080/10409230600872872  0.362
2006 Alexandrov A, Chernyakov I, Gu W, Hiley SL, Hughes TR, Grayhack EJ, Phizicky EM. Rapid tRNA decay can result from lack of nonessential modifications. Molecular Cell. 21: 87-96. PMID 16387656 DOI: 10.1016/J.Molcel.2005.10.036  0.759
2005 Gelperin DM, White MA, Wilkinson ML, Kon Y, Kung LA, Wise KJ, Lopez-Hoyo N, Jiang L, Piccirillo S, Yu H, Gerstein M, Dumont ME, Phizicky EM, Snyder M, Grayhack EJ. Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. Genes & Development. 19: 2816-26. PMID 16322557 DOI: 10.1101/Gad.1362105  0.448
2005 Gu W, Hurto RL, Hopper AK, Grayhack EJ, Phizicky EM. Depletion of Saccharomyces cerevisiae tRNA(His) guanylyltransferase Thg1p leads to uncharged tRNAHis with additional m(5)C. Molecular and Cellular Biology. 25: 8191-201. PMID 16135808 DOI: 10.1128/Mcb.25.18.8191-8201.2005  0.427
2005 Ma X, Yang C, Alexandrov A, Grayhack EJ, Behm-Ansmant I, Yu YT. Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism. The Embo Journal. 24: 2403-13. PMID 15962000 DOI: 10.1038/Sj.Emboj.7600718  0.378
2005 Alexandrov A, Grayhack EJ, Phizicky EM. tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p. Rna (New York, N.Y.). 11: 821-30. PMID 15811913 DOI: 10.1261/Rna.2030705  0.455
2004 Alexandrov A, Vignali M, LaCount DJ, Quartley E, de Vries C, De Rosa D, Babulski J, Mitchell SF, Schoenfeld LW, Fields S, Hol WG, Dumont ME, Phizicky EM, Grayhack EJ. A facile method for high-throughput co-expression of protein pairs. Molecular & Cellular Proteomics : McP. 3: 934-8. PMID 15240823 DOI: 10.1074/Mcp.T400008-Mcp200  0.399
2003 Van Slyke C, Grayhack EJ. The essential transcription factor Reb1p interacts with the CLB2 UAS outside of the G2/M control region. Nucleic Acids Research. 31: 4597-607. PMID 12888520 DOI: 10.1093/Nar/Gkg638  0.74
2002 Phizicky EM, Martzen MR, McCraith SM, Spinelli SL, Xing F, Shull NP, Van Slyke C, Montagne RK, Torres FM, Fields S, Grayhack EJ. Biochemical genomics approach to map activities to genes. Methods in Enzymology. 350: 546-59. PMID 12073335 DOI: 10.1016/S0076-6879(02)50984-8  0.723
2001 Grayhack EJ, Phizicky EM. Genomic analysis of biochemical function. Current Opinion in Chemical Biology. 5: 34-9. PMID 11166645 DOI: 10.1016/S1367-5931(00)00169-1  0.372
1999 Martzen MR, McCraith SM, Spinelli SL, Torres FM, Fields S, Grayhack EJ, Phizicky EM. A biochemical genomics approach for identifying genes by the activity of their products. Science (New York, N.Y.). 286: 1153-5. PMID 10550052 DOI: 10.1126/Science.286.5442.1153  0.33
1997 Kuo MH, Nadeau ET, Grayhack EJ. Multiple phosphorylated forms of the Saccharomyces cerevisiae Mcm1 protein include an isoform induced in response to high salt concentrations Molecular and Cellular Biology. 17: 819-832. PMID 9001236 DOI: 10.1128/Mcb.17.2.819  0.45
1994 Kuo MH, Grayhack E. A library of yeast genomic MCM1 binding sites contains genes involved in cell cycle control, cell wall and membrane structure, and metabolism. Molecular and Cellular Biology. 14: 348-59. PMID 8264602 DOI: 10.1128/Mcb.14.1.348  0.412
1987 Yang XJ, Hart CM, Grayhack EJ, Roberts JW. Transcription antitermination by phage lambda gene Q protein requires a DNA segment spanning the RNA start site. Genes & Development. 1: 217-26. PMID 2960589 DOI: 10.1101/Gad.1.3.217  0.436
1985 Grayhack EJ, Yang XJ, Lau LF, Roberts JW. Phage lambda gene Q antiterminator recognizes RNA polymerase near the promoter and accelerates it through a pause site. Cell. 42: 259-69. PMID 2990726 DOI: 10.1016/S0092-8674(85)80121-5  0.438
1983 Grayhack EJ, Roberts JW. The phage lambda Q gene product: activity of a transcription antiterminator in vitro. Cell. 30: 637-48. PMID 6215986 DOI: 10.1016/0092-8674(82)90260-4  0.427
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