Karen Halliday - Related publications

University of Edinburgh, Edinburgh, Scotland, United Kingdom 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Lopez L, Fasano C, Perrella G, Facella P. Cryptochromes and the Circadian Clock: The Story of a Very Complex Relationship in a Spinning World. Genes. 12. PMID 33946956 DOI: 10.3390/genes12050672   
2021 Lee J, Kang MH, Kim JY, Lim PO. The Role of Light and Circadian Clock in Regulation of Leaf Senescence. Frontiers in Plant Science. 12: 669170. PMID 33912212 DOI: 10.3389/fpls.2021.669170   
2021 Balcerowicz M, Mahjoub M, Nguyen D, Lan H, Stoeckle D, Conde S, Jaeger KE, Wigge PA, Ezer D. An early-morning gene network controlled by phytochromes and cryptochromes regulates photomorphogenesis pathways in Arabidopsis. Molecular Plant. PMID 33766657 DOI: 10.1016/j.molp.2021.03.019   
2021 de Melo JRF, Gutsch A, Caluwé T, Leloup JC, Gonze D, Hermans C, Webb AAR, Verbruggen N. Magnesium maintains the length of the circadian period in Arabidopsis. Plant Physiology. 185: 519-532. PMID 33721908 DOI: 10.1093/plphys/kiaa042   
2021 Lee HG, Seo PJ. The JMJ29 Protein Controls Circadian Oscillation through Diurnal Histone Demethylation at the and Loci. Genes. 12. PMID 33916408 DOI: 10.3390/genes12040529   
2021 Markham KK, Greenham K. Abiotic stress through time. The New Phytologist. PMID 33780004 DOI: 10.1111/nph.17367   
2021 Kidokoro S, Hayashi K, Haraguchi H, Ishikawa T, Soma F, Konoura I, Toda S, Mizoi J, Suzuki T, Shinozaki K, Yamaguchi-Shinozaki K. Posttranslational regulation of multiple clock-related transcription factors triggers cold-inducible gene expression in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33649234 DOI: 10.1073/pnas.2021048118   
2021 Rosbash M. Circadian Rhythms and the Transcriptional Feedback Loop (Nobel Lecture)*. Angewandte Chemie (International Ed. in English). PMID 33634573 DOI: 10.1002/anie.202015199   
2021 Meher PK, Mohapatra A, Satpathy S, Sharma A, Saini I, Pradhan SK, Rai A. PredCRG: A computational method for recognition of plant circadian genes by employing support vector machine with Laplace kernel. Plant Methods. 17: 46. PMID 33902670 DOI: 10.1186/s13007-021-00744-3   
2021 Dapergola E, Menegazzi P, Raabe T, Hovhanyan A. Light Stimuli and Circadian Clock Affect Neural Development in . Frontiers in Cell and Developmental Biology. 9: 595754. PMID 33763414 DOI: 10.3389/fcell.2021.595754   
2021 Mavroudis PD, Jusko WJ. Mathematical modeling of mammalian circadian clocks affecting drug and disease responses. Journal of Pharmacokinetics and Pharmacodynamics. PMID 33725238 DOI: 10.1007/s10928-021-09746-z   
2021 Bonnot T, Nagel DH. Time of day prioritizes the pool of translating mRNAs in response to heat stress. The Plant Cell. PMID 33871647 DOI: 10.1093/plcell/koab113   
2021 Ruby CL, Major RJ, Hinrichsen RD. Regulation of tissue regeneration by the circadian clock. The European Journal of Neuroscience. PMID 33893679 DOI: 10.1111/ejn.15244   
2021 Zhu J, Zhou Q, Pan M, Zhou C. Multi-omics analysis of the prognosis and therapeutic significance of circadian clock in ovarian cancer. Gene. 145644. PMID 33848579 DOI: 10.1016/j.gene.2021.145644   
2021 Uriu K, Tei H. Complementary phase responses via functional differentiation of dual negative feedback loops. Plos Computational Biology. 17: e1008774. PMID 33684114 DOI: 10.1371/journal.pcbi.1008774   
2021 Lei J, Zhu-Salzman K. LATE ELONGATED HYPOCOTYL potentiates resistance conferred by CIRCADIAN CLOCK ASSOCIATED1 to aphid by co-regulating the expression of indole glucosinolate biosynthetic genes. Plant Signaling & Behavior. 1908708. PMID 33794732 DOI: 10.1080/15592324.2021.1908708   
2021 Acevedo A, Mavroudis PD, DuBois D, Almon RR, Jusko WJ, Androulakis IP. Pathway-level analysis of genome-wide circadian dynamics in diverse tissues in rat and mouse. Journal of Pharmacokinetics and Pharmacodynamics. PMID 33768484 DOI: 10.1007/s10928-021-09750-3   
2021 Ness-Cohn E, Allada R, Braun R. Comment on "Circadian rhythms in the absence of the clock gene ". Science (New York, N.Y.). 372. PMID 33859007 DOI: 10.1126/science.abe9230   
2021 Arbel-Goren R, Buonfiglio V, Di Patti F, Camargo S, Valladares A, Flores E, Herrero A, Fanelli D, Stavans J. Robust, coherent and synchronized circadian clock-controlled oscillations along filaments. Elife. 10. PMID 33749592 DOI: 10.7554/eLife.64348   
2021 Bolsius YG, Zurbriggen MD, Kim JK, Kas MJ, Meerlo P, Aton SJ, Havekes R. The role of clock genes in sleep, stress and memory. Biochemical Pharmacology. 114493. PMID 33647263 DOI: 10.1016/j.bcp.2021.114493   
2021 Appenroth D, Nord A, Hazlerigg DG, Wagner GC. Body Temperature and Activity Rhythms Under Different Photoperiods in High Arctic Svalbard ptarmigan (). Frontiers in Physiology. 12: 633866. PMID 33762966 DOI: 10.3389/fphys.2021.633866   
2021 Stephenson EM, Usselmann LEJ, Tergaonkar V, Virshup D, Dallmann R. Cancer clocks in tumourigenesis: the p53 pathway and beyond. Endocrine-Related Cancer. PMID 33638942 DOI: 10.1530/ERC-20-0475   
2021 Zeb F, Wu X, Fatima S, Zaman MH, Khan SA, Safdar M, Alam I, Feng Q. Time-restricted feeding regulates molecular mechanisms with involvement of circadian rhythm to prevent metabolic diseases. Nutrition (Burbank, Los Angeles County, Calif.). 89: 111244. PMID 33930788 DOI: 10.1016/j.nut.2021.111244   
2021 Teets NM, Meuti ME. Hello Darkness, My Old Friend: A Tutorial of Nanda-Hamner Protocols. Journal of Biological Rhythms. 748730421998469. PMID 33715479 DOI: 10.1177/0748730421998469   
2021 Vu CHV, Kawashima M, Nakamura W, Nakamura TJ, Tsubota K. Circadian clock regulates tear secretion in the lacrimal gland. Experimental Eye Research. 206: 108524. PMID 33662354 DOI: 10.1016/j.exer.2021.108524   
2021 Alaasam VJ, Liu X, Niu Y, Habibian JS, Pieraut S, Ferguson BS, Zhang Y, Ouyang JQ. Effects of dim artificial light at night on locomotor activity, cardiovascular physiology, and circadian clock genes in a diurnal songbird. Environmental Pollution (Barking, Essex : 1987). 282: 117036. PMID 33838441 DOI: 10.1016/j.envpol.2021.117036   
2021 Sun C, Zhang K, Zhou Y, Xiang L, He C, Zhong C, Li K, Wang Q, Yang C, Wang Q, Chen C, Chen D, Wang Y, Liu C, Yang B, et al. Dual function of clock component OsLHY sets critical day length for photoperiodic flowering in rice. Plant Biotechnology Journal. PMID 33740293 DOI: 10.1111/pbi.13580   
2021 Bumgarner JR, Nelson RJ. Light at Night and Disrupted Circadian Rhythms Alter Physiology and Behavior. Integrative and Comparative Biology. PMID 33787878 DOI: 10.1093/icb/icab017   
2021 Abo SMC, Layton AT. Modeling the circadian regulation of the immune system: Sexually dimorphic effects of shift work. Plos Computational Biology. 17: e1008514. PMID 33788832 DOI: 10.1371/journal.pcbi.1008514   
2021 Shankar A, Williams CT. The darkness and the light: diurnal rodent models for seasonal affective disorder. Disease Models & Mechanisms. 14. PMID 33735098 DOI: 10.1242/dmm.047217   
2021 Ghosh S, Lewis KN, Tulsian R, Astafev AA, Buffenstein R, Kondratov RV. It's about time; divergent circadian clocks in livers of mice and naked mole-rats. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21590. PMID 33871093 DOI: 10.1096/fj.202100116R   
2021 Xin H, Deng F, Zhou M, Huang R, Ma X, Tian H, Tan Y, Chen X, Deng D, Shui G, Zhang Z, Li MD. A multi-tissue multi-omics analysis reveals distinct kineztics in entrainment of diurnal transcriptomes by inverted feeding. Iscience. 24: 102335. PMID 33889826 DOI: 10.1016/j.isci.2021.102335   
2021 Cheng AH, Cheng HM. Genesis of the Master Circadian Pacemaker in Mice. Frontiers in Neuroscience. 15: 659974. PMID 33833665 DOI: 10.3389/fnins.2021.659974   
2021 Cheng AH, Cheng HM. Genesis of the Master Circadian Pacemaker in Mice. Frontiers in Neuroscience. 15: 659974. PMID 33833665 DOI: 10.3389/fnins.2021.659974   
2021 Goh GH, Blache D, Mark PJ, Kennington WJ, Maloney SK. Daily temperature cycles prolong lifespan and have sex-specific effects on peripheral clock gene expression in . The Journal of Experimental Biology. PMID 33758022 DOI: 10.1242/jeb.233213   
2021 Gao Y, Wu Y, Zhang N, Yuan H, Wang F, Xu H, Yu J, Ma J, Hou S, Cao X. IDH1 gene mutation activates Smad signaling molecules to regulate the expression levels of cell cycle and biological rhythm genes in human glioma U87‑MG cells. Molecular Medicine Reports. 23. PMID 33760141 DOI: 10.3892/mmr.2021.11993   
2021 Chakir I, Tournier BB, Touati H, Poirel VJ, Challet E, Pevet P, Ouarour A, Vuillez P. Pinealectomy and gonadectomy modulate amplitude, but not photoperiodic modulation of Clock gene expression in the Syrian hamster suprachiasmatic nuclei. The European Journal of Neuroscience. PMID 33840135 DOI: 10.1111/ejn.15228   
2021 Chen HC, Chen YC, Wang TN, Fang WF, Chang YC, Chen YM, Chen IY, Lin MC, Yang MY. Disrupted Expression of Circadian Clock Genes in Patients with Bronchial Asthma. Journal of Asthma and Allergy. 14: 371-380. PMID 33888995 DOI: 10.2147/JAA.S302508   
2021 Ribeiro RFN, Cavadas C, Manuel C Silva M. Small-molecule modulators of the circadian clock: pharmacological potentials in circadian-related diseases. Drug Discovery Today. PMID 33781946 DOI: 10.1016/j.drudis.2021.03.015   
2021 Ferraz-Bannitz R, Beraldo RA, Coelho PO, Moreira AC, Castro M, Foss-Freitas MC. Circadian Misalignment Induced by Chronic Night Shift Work Promotes Endoplasmic Reticulum Stress Activation Impacting Directly on Human Metabolism. Biology. 10. PMID 33807589 DOI: 10.3390/biology10030197   
2021 Phillips NE, Hugues A, Yeung J, Durandau E, Nicolas D, Naef F. The circadian oscillator analysed at the single-transcript level. Molecular Systems Biology. 17: e10135. PMID 33719202 DOI: 10.15252/msb.202010135   
2021 Gutierrez Lopez DE, Lashinger LM, Weinstock GM, Bray MS. Circadian rhythms and the gut microbiome synchronize the host's metabolic response to diet. Cell Metabolism. PMID 33789092 DOI: 10.1016/j.cmet.2021.03.015   
2021 Lo EH, Albers GW, Dichgans M, Donnan G, Esposito E, Foster R, Howells DW, Huang YG, Ji X, Klerman EB, Lee S, Li W, Liebeskind DS, Lizasoain I, Mandeville ET, et al. Circadian Biology and Stroke. Stroke. STROKEAHA120031742. PMID 33940951 DOI: 10.1161/STROKEAHA.120.031742   
2021 Cui L, Jin X, Xu F, Wang S, Liu L, Li X, Lin H, Du M. Circadian rhythm-associated Rev-erbα modulates polarization of decidual acrophage via PI3K/Akt signaling pathway. American Journal of Reproductive Immunology (New York, N.Y. : 1989). e13436. PMID 33934423 DOI: 10.1111/aji.13436   
2021 Ruiz D, Bajwa ST, Vanani N, Bajwa TA, Cavanaugh DJ. Slowpoke functions in circadian output cells to regulate rest: Activity rhythms. Plos One. 16: e0249215. PMID 33765072 DOI: 10.1371/journal.pone.0249215   
2021 Burish MJ, Han C, Mawatari K, Wirianto M, Kim E, Ono K, Parakramaweera R, Chen Z, Yoo SH. The first-line cluster headache medication verapamil alters the circadian period and elicits sex-specific sleep changes in mice. Chronobiology International. 1-12. PMID 33829951 DOI: 10.1080/07420528.2021.1892127   
2021 Ghosh A, Sharma P, Dansana S, Sheeba V. Evidence for Co-Evolution of Masking With Circadian Phase in . Journal of Biological Rhythms. 748730421997262. PMID 33752486 DOI: 10.1177/0748730421997262   
2021 Sadria M, Layton AT. Aging affects circadian clock and metabolism and modulates timing of medication. Iscience. 24: 102245. PMID 33796837 DOI: 10.1016/j.isci.2021.102245   
2021 Alamilla J, Ramiro-Cortés Y, Mejía-López A, Chavez JL, Rivera DO, Felipe V, Aguilar-Roblero R. Altered Light Sensitivity of Circadian Clock in Shank3 Mouse. Frontiers in Neuroscience. 15: 604165. PMID 33679297 DOI: 10.3389/fnins.2021.604165   
2021 Xue X, Ali YF, Luo W, Liu C, Zhou G, Liu NA. Biological Effects of Space Hypomagnetic Environment on Circadian Rhythm. Frontiers in Physiology. 12: 643943. PMID 33767637 DOI: 10.3389/fphys.2021.643943