Hong Ma - Publications

Affiliations: 
1990-1998 Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
 1998-2008 Biology The Pennsylvania State University-Eberly College of Science 
 2008-2016 School of Life Science Fudan university, Shanghai, Shanghai Shi, China 
 2017- Biology The Pennsylvania State University-Eberly College of Science 
Area:
Plant development and evolution

300 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Messeder JVS, Carlo TA, Zhang G, Tovar JD, Arana C, Huang J, Huang CH, Ma H. A highly resolved nuclear phylogeny uncovers strong phylogenetic conservatism and correlated evolution of fruit color and size in Solanum L. The New Phytologist. PMID 38798267 DOI: 10.1111/nph.19849  0.599
2024 Zhang T, Huang W, Zhang L, Li DZ, Qi J, Ma H. Phylogenomic profiles of whole-genome duplications in Poaceae and landscape of differential duplicate retention and losses among major Poaceae lineages. Nature Communications. 15: 3305. PMID 38632270 DOI: 10.1038/s41467-024-47428-9  0.496
2024 Ma X, Wang J, Su Z, Ma H. Developmentally dependent reprogramming of the Arabidopsis floral transcriptome under sufficient and limited water availability. Bmc Plant Biology. 24: 273. PMID 38605371 DOI: 10.1186/s12870-024-04916-w  0.721
2024 Zhang G, Yang J, Zhang C, Jiao B, Panero JL, Cai J, Zhang ZR, Gao LM, Gao T, Ma H. Nuclear phylogenomics of Asteraceae with increased sampling provides new insights into convergent morphological and molecular evolution. Plant Communications. 100851. PMID 38409784 DOI: 10.1016/j.xplc.2024.100851  0.316
2024 Xiang Y, Zhang T, Zhao Y, Dong H, Chen H, Hu Y, Huang CH, Xiang J, Ma H. Angiosperm-wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits. Journal of Integrative Plant Biology. PMID 38351714 DOI: 10.1111/jipb.13618  0.632
2024 Wang J, Ma X, Hu Y, Feng G, Guo C, Zhang X, Ma H. Regulation of micro- and small-exon retention and other splicing processes by GRP20 for flower development. Nature Plants. PMID 38195906 DOI: 10.1038/s41477-023-01605-8  0.403
2023 Lai Z, Wang J, Fu Y, Wang M, Ma H, Peng S, Chang F. Revealing the role of CCoAOMT1: fine-tuning bHLH transcription factors for optimal anther development. Science China. Life Sciences. PMID 38097889 DOI: 10.1007/s11427-023-2461-0  0.706
2023 Xu W, Yu Y, Jing J, Wu Z, Zhang X, You C, Ma H, Copenhaver GP, He Y, Wang Y. SCF mediates degradation of the meiosis-specific recombinase DMC1. Nature Communications. 14: 5044. PMID 37598222 DOI: 10.1038/s41467-023-40799-5  0.793
2023 Hu R, Li X, Hu Y, Zhang R, Lv Q, Zhang M, Sheng X, Zhao F, Chen Z, Ding Y, Yuan H, Wu X, Xing S, Yan X, Bao F, ... ... Ma H, et al. Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet. Cell. PMID 37562403 DOI: 10.1016/j.cell.2023.07.003  0.726
2023 Wang C, Li X, Huang J, Ma H, Wang CR, Wang Y. Isolation of Meiocytes and Cytological Analyses of Male Meiotic Chromosomes in Soybean, Lettuce, and Maize. Methods in Molecular Biology (Clifton, N.J.). 2686: 219-239. PMID 37540360 DOI: 10.1007/978-1-0716-3299-4_9  0.641
2023 Chang F, Wang S, Lai Z, Zhang Z, Jin Y, Ma H. Cell Biological Analyses of Anther Morphogenesis and Pollen Viability in Arabidopsis and Rice. Methods in Molecular Biology (Clifton, N.J.). 2686: 199-218. PMID 37540359 DOI: 10.1007/978-1-0716-3299-4_8  0.637
2023 Zhang L, Morales-Briones DF, Li Y, Zhang G, Zhang T, Huang CH, Guo P, Zhang K, Wang Y, Wang H, Shang FD, Ma H. Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae). The New Phytologist. PMID 37537712 DOI: 10.1111/nph.19175  0.654
2023 Wu Y, Song J, Liu M, Ma H, Zhang J. Integrating GWAS and proteome data to identify novel drug targets for MU. Scientific Reports. 13: 10437. PMID 37369724 DOI: 10.1038/s41598-023-37177-y  0.316
2023 Yu Y, Song W, Zhai N, Zhang S, Wang J, Wang S, Liu W, Huang CH, Ma H, Chai J, Chang F. PXL1 and SERKs act as receptor-coreceptor complexes for the CLE19 peptide to regulate pollen development. Nature Communications. 14: 3307. PMID 37286549 DOI: 10.1038/s41467-023-39074-4  0.769
2023 Huang J, Xu W, Zhai J, Hu Y, Guo J, Zhang C, Zhao Y, Zhang L, Martine C, Ma H, Huang CH. Nuclear phylogeny and insights into whole genome duplications and reproductive development of Solanaceae plants. Plant Communications. 100595. PMID 36966360 DOI: 10.1016/j.xplc.2023.100595  0.675
2023 Zan T, He YT, Zhang M, Yonezawa T, Ma H, Zhao QM, Kuo WY, Zhang WJ, Huang CH. Phylogenomic analyses of Camellia support reticulate evolution among major clades. Molecular Phylogenetics and Evolution. 182: 107744. PMID 36842731 DOI: 10.1016/j.ympev.2023.107744  0.624
2023 Zhang K, Yang J, Qin Z, Lu T, Lou D, Ran Q, Huang H, Cheng S, Zellmer L, Ma H, Liao DJ. Establishment of New Genetic Markers and Methods for Sex Determination of Mouse and Human Cells using Polymerase Chain Reactions and Crude DNA Samples. Current Genomics. 23: 275-288. PMID 36777874 DOI: 10.2174/1389202923666220610121344  0.382
2023 Zhang G, Hu Y, Huang MZ, Huang WC, Liu DK, Zhang D, Hu H, Downing JL, Liu ZJ, Ma H. COMPREHENSIVE PHYLOGENETIC ANALYSES OF ORCHIDACEAE USING NUCLEAR GENES AND EVOLUTIONARY INSIGHTS INTO EPIPHYTISM. Journal of Integrative Plant Biology. PMID 36738233 DOI: 10.1111/jipb.13462  0.317
2022 Wang C, Huang J, Li Y, Zhang J, He C, Li T, Jiang D, Dong A, Ma H, Copenhaver GP, Wang Y. DNA polymerase epsilon binds histone H3.1-H4 and recruits MORC1 to mediate meiotic heterochromatin condensation. Proceedings of the National Academy of Sciences of the United States of America. 119: e2213540119. PMID 36260743 DOI: 10.1073/pnas.2213540119  0.589
2022 Chen D, Zhang T, Chen Y, Ma H, Qi J. Tree2GD: A Phylogenomic Method to Detect Large Scale Gene Duplication Events. Bioinformatics (Oxford, England). PMID 36218394 DOI: 10.1093/bioinformatics/btac669  0.497
2022 Liu BB, Ren C, Kwak M, Hodel RGJ, Xu C, He J, Zhou WB, Huang CH, Ma H, Qian GZ, Hong DY, Wen J. Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere. Journal of Integrative Plant Biology. PMID 35274452 DOI: 10.1111/jipb.13246  0.62
2022 Liu H, Ren D, Jiang L, Li X, Yao Y, Mi L, Chen W, Mo A, Jiang N, Yang J, Chen P, Ma H, Luo X, Lu P. Correction to: A Natural Variation in PLEIOTROPIC DEVELOPMENTAL DEFECTS Uncovers a Crucial Role for Chloroplast tRNA Modification in Translation and Plant Development. The Plant Cell. PMID 35166329 DOI: 10.1093/plcell/koac013  0.771
2022 Zhang L, Zhu X, Zhao Y, Guo J, Zhang T, Huang W, Huang J, Hu Y, Huang CH, Ma H. Phylotranscriptomics Resolves the Phylogeny of Pooideae and Uncovers Factors for Their Adaptive Evolution. Molecular Biology and Evolution. 39. PMID 35134207 DOI: 10.1093/molbev/msac026  0.669
2022 Huang W, Zhang L, Columbus JT, Hu Y, Zhao Y, Tang L, Guo Z, Chen W, McKain M, Bartlett M, Huang CH, Li DZ, Ge S, Ma H. A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C 4 photosynthesis. Molecular Plant. PMID 35093593 DOI: 10.1016/j.molp.2022.01.015  0.668
2021 Stull GW, Qu XJ, Parins-Fukuchi C, Yang YY, Yang JB, Yang ZY, Hu Y, Ma H, Soltis PS, Soltis DE, Li DZ, Smith SA, Yi TS. Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms. Nature Plants. PMID 34282286 DOI: 10.1038/s41477-021-00964-4  0.458
2021 Fu B, Ma H, Liu D. Functions and Regulation of Endogenous Retrovirus Elements during Zygotic Genome Activation: Implications for Improving Somatic Cell Nuclear Transfer Efficiency. Biomolecules. 11. PMID 34199637 DOI: 10.3390/biom11060829  0.318
2021 Morales-Briones DF, Gehrke B, Huang CH, Liston A, Ma H, Marx HE, Tank DC, Yang Y. Analysis of paralogs in target enrichment data pinpoints multiple ancient polyploidy events in Alchemilla s.l. (Rosaceae). Systematic Biology. PMID 33978764 DOI: 10.1093/sysbio/syab032  0.652
2021 Zhao Y, Zhang R, Jiang K, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi TS, Huang CH, Ma H. Nuclear Phylotranscriptomics/Phylogenomics Support Numerous Polyploidization Events and Hypotheses for the Evolution of Rhizobial Nitrogen-Fixing Symbiosis in Fabaceae. Molecular Plant. PMID 33631421 DOI: 10.1016/j.molp.2021.02.006  0.726
2021 Li X, Yu M, Bolaños-Villegas P, Zhang J, Ni D, Ma H, Wang Y. Fanconi Anemia Ortholog FANCM Regulates Meiotic Crossover Distribution in Plants. Plant Physiology. PMID 33576801 DOI: 10.1093/plphys/kiab061  0.688
2021 Zhang C, Huang CH, Liu M, Hu Y, Panero JL, Luebert F, Gao T, Ma H. Phylotranscriptomic insight into Asteraceae diversity, polyploidy, and morphological innovation. Journal of Integrative Plant Biology. PMID 33559953 DOI: 10.1111/jipb.13078  0.634
2020 Fu Y, Li M, Zhang S, Yang Q, Zhu E, You C, Qi J, Ma H, Chang F. Analyses of functional conservation and divergence reveal requirement of bHLH010/089/091 for pollen development at elevated temperature in Arabidopsis. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 47: 477-492. PMID 33393464 DOI: 10.1016/J.Jgg.2020.09.001  0.851
2020 Yang L, Su D, Chang X, Foster CSP, Sun L, Huang CH, Zhou X, Zeng L, Ma H, Zhong B. Phylogenomic Insights into Deep Phylogeny of Angiosperms Based on Broad Nuclear Gene Sampling. Plant Communications. 1: 100027. PMID 33367231 DOI: 10.1016/j.xplc.2020.100027  0.826
2020 Liang Y, Wang S, Zhao C, Ma X, Zhao Y, Shao J, Li Y, Li H, Song H, Ma H, Li H, Zhang B, Zhang L. Transcriptional regulation of bark freezing tolerance in apple (Malus domestica Borkh.). Horticulture Research. 7: 205. PMID 33328456 DOI: 10.1038/s41438-020-00432-8  0.688
2020 Zeng X, Li H, Li K, Yuan R, Zhao S, Li J, Luo J, Li X, Ma H, Wu G, Yan X. Evolution of the Brassicaceae-specific MS5-Like family and neofunctionalization of the novel MALE STERILITY 5 gene essential for male fertility in B. napus. The New Phytologist. PMID 33128826 DOI: 10.1111/nph.17053  0.436
2020 Lu J, Fu Y, Li M, Wang S, Wang J, Yang Q, Ye J, Zhang X, Ma H, Chang F. Global Quantitative Proteomics Studies Revealed Tissue-Preferential Expression and Phosphorylation of Regulatory Proteins in . International Journal of Molecular Sciences. 21. PMID 32854314 DOI: 10.3390/Ijms21176116  0.747
2020 Wang J, Yu C, Zhang S, Ye J, Dai H, Wang H, Huang J, Cao X, Ma J, Ma H, Wang Y. Author Correction: Cell-type-dependent histone demethylase specificity promotes meiotic chromosome condensation in Arabidopsis. Nature Plants. PMID 32724167 DOI: 10.1038/S41477-020-00755-3  0.663
2020 Zhang C, Zhang T, Luebert F, Xiang Y, Huang CH, Hu Y, Rees M, Frohlich MW, Qi J, Weigend M, Ma H. Asterid phylogenomics/phylotranscriptomics uncover morphological evolutionary histories and support phylogenetic placement for numerous whole genome duplications. Molecular Biology and Evolution. PMID 32652014 DOI: 10.1093/Molbev/Msaa160  0.793
2020 Tang H, Zhang L, Chen F, Zhang X, Chen F, Ma H, Van de Peer Y. Nymphaea colorata (Blue-Petal Water Lily). Trends in Genetics : Tig. PMID 32631632 DOI: 10.1016/J.Tig.2020.06.004  0.594
2020 Wang J, Yu C, Zhang S, Ye J, Dai H, Wang H, Huang J, Cao X, Ma J, Ma H, Wang Y. Cell-type-dependent histone demethylase specificity promotes meiotic chromosome condensation in Arabidopsis. Nature Plants. PMID 32572214 DOI: 10.1038/S41477-020-0697-0  0.671
2020 Wang H, Xu W, Sun Y, Lian Q, Wang C, Yu C, He C, Wang J, Ma H, Copenhaver GP, Wang Y. The cohesin loader SCC2 contains a PHD finger that is required for meiosis in land plants. Plos Genetics. 16: e1008849. PMID 32516352 DOI: 10.1371/Journal.Pgen.1008849  0.842
2020 Guo J, Xu W, Hu Y, Huang J, Zhao Y, Zhang L, Huang CH, Ma H. Phylotranscriptomics in Cucurbitaceae Reveal Multiple Whole Genome Duplications and Key Morphological and Molecular Innovations. Molecular Plant. PMID 32445889 DOI: 10.1016/J.Molp.2020.05.011  0.697
2020 Liu Z, Ma H, Jung S, Main D, Guo L. Developmental Mechanisms of Fleshy Fruit Diversity in Rosaceae. Annual Review of Plant Biology. 71: 547-573. PMID 32442388 DOI: 10.1146/Annurev-Arplant-111119-021700  0.693
2020 Liu H, Ren D, Jiang L, Li X, Yao Y, Mi L, Chen W, Mo A, Jiang N, Yang J, Chen P, Ma H, Luo X, Lu P. A Natural Variation in PLEIOTROPIC DEVELOPMENTAL DEFECTS Uncovers a Crucial Role for Chloroplast tRNA Modification in Translation and Plant Development. The Plant Cell. PMID 32327539 DOI: 10.1105/Tpc.19.00660  0.805
2020 Ma X, Su Z, Ma H. Molecular genetic analyses of abiotic stress responses during plant reproductive development. Journal of Experimental Botany. PMID 32072177 DOI: 10.1093/Jxb/Eraa089  0.768
2020 Zhang J, Fu XX, Li RQ, Zhao X, Liu Y, Li MH, Zwaenepoel A, Ma H, Goffinet B, Guan YL, Xue JY, Liao YY, Wang QF, Wang QH, Wang JY, et al. The hornwort genome and early land plant evolution. Nature Plants. PMID 32042158 DOI: 10.1038/S41477-019-0588-4  0.775
2019 Zhang L, Chen F, Zhang X, Li Z, Zhao Y, Lohaus R, Chang X, Dong W, Ho SYW, Liu X, Song A, Chen J, Guo W, Wang Z, Zhuang Y, ... ... Ma H, et al. The water lily genome and the early evolution of flowering plants. Nature. PMID 31853069 DOI: 10.1038/S41586-019-1852-5  0.822
2019 Huang J, Wang C, Li X, Fang X, Huang N, Wang Y, Ma H, Wang Y, Copenhaver GP. Conservation and divergence in the meiocyte sRNAomes of Arabidopsis, soybean, and cucumber. Plant Physiology. PMID 31719152 DOI: 10.1104/Pp.19.00807  0.668
2019 Liu X, Fu W, Tang Y, Zhang W, Song Z, Li L, Yang J, Ma H, Yang J, Zhou C, Davis CC, Wang Y. Diverse trajectories of plastome degradation in holoparasitic Cistanche and the whereabouts of the lost plastid genes. Journal of Experimental Botany. PMID 31639183 DOI: 10.1093/Jxb/Erz456  0.54
2019 Huang CH, Qi X, Chen D, Qi J, Ma H. Recurrent genome duplication events likely contributed to both the ancient and recent rise of ferns. Journal of Integrative Plant Biology. PMID 31628713 DOI: 10.1111/Jipb.12877  0.726
2019 Xu RY, Xu J, Wang L, Niu B, Copenhaver GP, Ma H, Zheng B, Wang Y. The Arabidopsis anaphase promoting complex/cyclosome subunit 8 is required for male meiosis. The New Phytologist. PMID 31230348 DOI: 10.1111/Nph.16014  0.694
2019 Wang L, Ma H, Lin J. Angiosperm-Wide and Family-Level Analyses of / Genes Reveal Differential Retention and Sequence Divergence After Whole-Genome Duplication. Frontiers in Plant Science. 10: 196. PMID 30863419 DOI: 10.3389/Fpls.2019.00196  0.58
2019 Huang J, Wang C, Wang H, Lu P, Zheng B, Ma H, Copenhaver GP, Wang Y. Meiocyte-specific and AtSPO11-1-dependent Small RNAs and Their Association with Meiotic Gene Expression and Recombination. The Plant Cell. PMID 30674694 DOI: 10.1105/Tpc.18.00511  0.816
2019 Sukiran NL, Ma JC, Ma H, Su Z. ANAC019 is required for recovery of reproductive development under drought stress in Arabidopsis. Plant Molecular Biology. PMID 30604322 DOI: 10.1007/S11103-018-0810-1  0.798
2018 Wang H, Guo C, Ma H, Qi J. Reply to Zwaenepoel et al.: meeting the challenges of detecting polyploidy events from transcriptomic data. Molecular Plant. PMID 30599205 DOI: 10.1016/J.Molp.2018.12.020  0.551
2018 Wang C, Huang J, Zhang J, Wang H, Han Y, Copenhaver GP, Ma H, Wang Y. The Largest Subunit of DNA Polymerase Delta is Required for Normal Formation of Meiotic Type I Crossovers. Plant Physiology. PMID 30459265 DOI: 10.1104/Pp.18.00861  0.688
2018 Kuo LY, Qi X, Ma H, Li FW. Order-level fern plastome phylogenomics: new insights from Hymenophyllales. American Journal of Botany. PMID 30168575 DOI: 10.1002/Ajb2.1152  0.391
2018 Jin Y, Pan W, Zheng X, Cheng X, Liu M, Ma H, Ge X. OsERF101, an ERF family transcription factor, regulates drought stress response in reproductive tissues. Plant Molecular Biology. PMID 30143992 DOI: 10.1007/S11103-018-0762-5  0.547
2018 Kirioukhova O, Shah JN, Larsen DS, Tayyab M, Mueller NE, Govind G, Baroux C, Federer M, Gheyselinck J, Barrell PJ, Ma H, Sprunck S, Huettel B, Wallace H, Grossniklaus U, et al. Aberrant imprinting may underlie evolution of parthenogenesis. Scientific Reports. 8: 10626. PMID 30006526 DOI: 10.1038/S41598-018-27863-7  0.346
2018 Qi X, Kuo LY, Guo C, Li H, Li Z, Qi J, Wang L, Hu Y, Xiang J, Zhang C, Guo J, Huang CH, Ma H. A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families. Molecular Phylogenetics and Evolution. PMID 29981932 DOI: 10.1016/J.Ympev.2018.06.043  0.761
2018 Modliszewski JL, Wang H, Albright AR, Lewis SM, Bennett AR, Huang J, Ma H, Wang Y, Copenhaver GP. Elevated temperature increases meiotic crossover frequency via the interfering (Type I) pathway in Arabidopsis thaliana. Plos Genetics. 14: e1007384. PMID 29771908 DOI: 10.1371/Journal.Pgen.1007384  0.69
2018 Yao L, Cheng X, Gu Z, Huang W, Li S, Wang L, Wang YF, Xu P, Ma H, Ge X. The AWPM-19 Family Protein OsPM1 Mediates Abscisic Acid Influx and Drought Response in Rice. The Plant Cell. PMID 29716991 DOI: 10.1105/Tpc.17.00770  0.499
2018 Ren R, Wang H, Guo C, Zhang N, Zeng L, Chen Y, Ma H, Qi J. Wide-Spread Whole Genome Duplications Contribute to Genome Complexity and Species Diversity in Angiosperms. Molecular Plant. PMID 29317285 DOI: 10.1016/J.Molp.2018.01.002  0.828
2017 Zhang L, Kong H, Ma H, Yang J. Phylogenomic detection and functional prediction of genes potentially important for plant meiosis. Gene. PMID 29223357 DOI: 10.1016/J.Gene.2017.12.005  0.8
2017 Li X, Ye J, Ma H, Lu P. Proteomic analysis of lysine acetylation provides strong evidence for acetylated proteins involved in plant meiosis and tapetum function. The Plant Journal : For Cell and Molecular Biology. PMID 29124795 DOI: 10.1111/Tpj.13766  0.794
2017 Wang S, Lu J, Song X, Ren SC, You C, Xu J, Liu CM, Ma H, Chang F. Cytological and Transcriptomic Analyses Reveal Important Roles of CLE19 in Pollen Exine Formation. Plant Physiology. PMID 28916592 DOI: 10.1104/Pp.17.00439  0.855
2017 You C, Cui J, Wang H, Qi X, Kuo LY, Ma H, Gao L, Mo B, Chen X. Conservation and divergence of small RNA pathways and microRNAs in land plants. Genome Biology. 18: 158. PMID 28835265 DOI: 10.1186/S13059-017-1291-2  0.789
2017 Ma H. REPLY: The BIF Domain is structurally and functionally distinct from other types of ACT-like domains. The Plant Cell. PMID 28747420 DOI: 10.1105/Tpc.17.00547  0.458
2017 Su H, Cheng Z, Huang J, Lin J, Copenhaver GP, Ma H, Wang Y. Arabidopsis RAD51, RAD51C and XRCC3 proteins form a complex and facilitate RAD51 localization on chromosomes for meiotic recombination. Plos Genetics. 13: e1006827. PMID 28562599 DOI: 10.1371/Journal.Pgen.1006827  0.764
2017 Zhang SS, Yang H, Ding L, Song ZT, Ma H, Chang F, Liu JX. Tissue-Specific Transcriptomics Reveals an Important Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis. The Plant Cell. PMID 28442596 DOI: 10.1105/Tpc.16.00916  0.779
2017 Zeng L, Zhang N, Zhang Q, Endress PK, Huang J, Ma H. Resolution of deep eudicot phylogeny and their temporal diversification using nuclear genes from transcriptomic and genomic datasets. The New Phytologist. PMID 28294342 DOI: 10.1111/Nph.14503  0.716
2017 Shi Q, Zhou L, Wang Y, Ma H. A Strategy for Screening Monoclonal Antibodies for Arabidopsis Flowers. Frontiers in Plant Science. 8: 270. PMID 28293248 DOI: 10.3389/Fpls.2017.00270  0.634
2017 Liu C, Wu Q, Liu W, Gu Z, Wang W, Xu P, Ma H, Ge X. Poly (ADP-ribose) polymerases regulate cell division and development in Arabidopsis roots. Journal of Integrative Plant Biology. PMID 28263025 DOI: 10.1111/Jipb.12530  0.485
2017 Zhao F, Zheng YF, Zeng T, Sun R, Yang JY, Li Y, Ren D, Ma H, Xu ZH, Bai SN. Phosphorylation of SPOROCYTELESS/NOZZLE by the MPK3/6 kinase is Required for Anther Development. Plant Physiology. PMID 28209842 DOI: 10.1104/pp.16.01765  0.393
2017 Zhou M, Chen H, Wei D, Ma H, Lin J. Arabidopsis CBF3 and DELLAs positively regulate each other in response to low temperature. Scientific Reports. 7: 39819. PMID 28051152 DOI: 10.1038/Srep39819  0.496
2016 Wang D, Yang C, Wang H, Wu Z, Jiang J, Liu J, He Z, Chang F, Ma H, Wang X. BKI1 regulates plant architecture through coordinated inhibition of the brassinosteroid and ERECTA signaling pathways in Arabidopsis. Molecular Plant. PMID 27988365 DOI: 10.1016/J.Molp.2016.11.014  0.748
2016 Xiang Y, Huang CH, Hu Y, Wen J, Li S, Yi T, Chen H, Xiang J, Ma H. Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication. Molecular Biology and Evolution. PMID 27856652 DOI: 10.1093/Molbev/Msw242  0.806
2016 Ren R, Sun Y, Zhao Y, Geiser D, Ma H, Zhou X. Phylogenetic Resolution of Deep Eukaryotic and Fungal Relationships Using Highly Conserved Low-Copy Nuclear Genes. Genome Biology and Evolution. PMID 27604879 DOI: 10.1093/Gbe/Evw196  0.798
2016 Zhao Q, Li M, Jia Z, Liu F, Ma H, Huang Y, Song S. AtMYB44 positively regulates the enhanced elongation of primary roots induced by N-3-oxo-hexanoyl-homoserine lactone in Arabidopsis thaliana. Molecular Plant-Microbe Interactions : Mpmi. PMID 27604593 DOI: 10.1094/MPMI-03-16-0063-R  0.315
2016 Huang CH, Zhang C, Liu M, Hu Y, Gao T, Qi J, Ma H. Multiple polyploidization events across Asteraceae with two nested events in the early history revealed by nuclear phylogenomics. Molecular Biology and Evolution. PMID 27604225 DOI: 10.1093/Molbev/Msw157  0.763
2016 Ye J, Zhang Z, You C, Zhang X, Lu J, Ma H. Abundant protein phosphorylation potentially regulates Arabidopsis anther development. Journal of Experimental Botany. PMID 27531888 DOI: 10.1093/Jxb/Erw293  0.772
2016 Wang J, Niu B, Huang J, Wang H, Yang X, Dong A, Makaroff CA, Ma H, Wang Y. The PHD Finger Protein MMD1/DUET Ensures the Progression of Male Meiotic Chromosome Condensation and Directly Regulates the Expression of the Condensin Gene CAP-D3. The Plant Cell. PMID 27385818 DOI: 10.1105/Tpc.16.00040  0.706
2016 Zhao L, Li X, Zhang N, Zhang SD, Yi TS, Ma H, Guo ZH, Li DZ. Phylogenomic Analyses of Large-scale Nuclear Genes Provide New Insights into the Evolutionary Relationships within the Rosids. Molecular Phylogenetics and Evolution. PMID 27369455 DOI: 10.1016/J.Ympev.2016.06.007  0.512
2016 Guo C, Yao L, You C, Wang S, Cui J, Ge X, Ma H. MID1 Plays an Important Role in Response to Drought Stress during Reproductive Development. The Plant Journal : For Cell and Molecular Biology. PMID 27337541 DOI: 10.1111/Tpj.13250  0.843
2016 Cui J, You C, Zhu E, Huang Q, Ma H, Chang F. Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development. The Plant Cell. PMID 27113773 DOI: 10.1105/Tpc.15.00986  0.814
2016 Lu D, Ni W, Stanley BA, Ma H. Proteomics and transcriptomics analyses of Arabidopsis floral buds uncover important functions of ARABIDOPSIS SKP1-LIKE1. Bmc Plant Biology. 16: 61. PMID 26940208 DOI: 10.1186/S12870-015-0571-9  0.805
2016 Chen ZD, Lu AM, Zhang SZ, Wang QF, Liu ZJ, Li DZ, Ma H, Li JH, Soltis DE, Soltis PS, Wen J, Kong HZ, Wang XQ, Wang YZ, Zhou SL, et al. The Tree of Life: China project Journal of Systematics and Evolution. 54: 273-276. DOI: 10.1111/Jse.12215  0.308
2016 Li H, Shi Q, Zhang ZB, Zeng LP, Qi J, Ma H. Evolution of the leucine-rich repeat receptor-like protein kinase gene family: Ancestral copy number and functional divergence of BAM1 and BAM2 in Brassicaceae Journal of Systematics and Evolution. 54: 204-218. DOI: 10.1111/Jse.12206  0.607
2016 Huang J, Copenhaver GP, Ma H, Wang Y. New insights into the role of DNA synthesis in meiotic recombination Science Bulletin. 61: 1260-1269. DOI: 10.1007/S11434-016-1126-7  0.661
2015 Niu B, Wang L, Zhang L, Ren D, Ren R, Copenhaver GP, Ma H, Wang Y. Arabidopsis Cell Division Cycle 20.1 Is Required for Normal Meiotic Spindle Assembly and Chromosome Segregation. The Plant Cell. PMID 26672070 DOI: 10.1105/Tpc.15.00834  0.809
2015 Huang CH, Sun R, Hu Y, Zeng L, Zhang N, Cai L, Zhang Q, Koch MA, Al-Shehbaz I, Edger PP, Pires JC, Tan DY, Zhong Y, Ma H. Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution. Molecular Biology and Evolution. PMID 26516094 DOI: 10.1093/Molbev/Msv226  0.791
2015 Zhang H, Gu Z, Wu Q, Yang L, Liu C, Ma H, Xia Y, Ge X. Arabidopsis PARG1 is the key factor promoting cell survival among the enzymes regulating post-translational poly(ADP-ribosyl)ation. Scientific Reports. 5: 15892. PMID 26516022 DOI: 10.1038/Srep15892  0.458
2015 Zeng L, Yin Y, You C, Pan Q, Xu D, Jin T, Zhang B, Ma H. Evolution and protein interactions of AP2 proteins in Brassicaceae: evidence linking development and environmental responses. Journal of Integrative Plant Biology. PMID 26472270 DOI: 10.1111/Jipb.12439  0.825
2015 Huang J, Cheng Z, Wang C, Hong Y, Su H, Wang J, Copenhaver GP, Ma H, Wang Y. Formation of interference-sensitive meiotic cross-overs requires sufficient DNA leading-strand elongation. Proceedings of the National Academy of Sciences of the United States of America. PMID 26392549 DOI: 10.1073/Pnas.1507165112  0.736
2015 Ye J, Zhang Z, Long H, Zhang Z, Hong Y, Zhang X, You C, Liang W, Ma H, Lu P. Proteomic and Phosphoproteomic Analyses Reveal Extensive Phosphorylation of Regulatory Proteins in Developing Rice Anthers. The Plant Journal : For Cell and Molecular Biology. PMID 26360816 DOI: 10.1111/Tpj.13019  0.806
2015 Amtmann A, Ma H, Wagner D. Chromatin and Epigenetics. Plant Physiology. 168: 1185-8. PMID 26246617 DOI: 10.1104/Pp.15.01023  0.601
2015 Zhu E, You C, Wang S, Cui J, Niu B, Wang Y, Qi J, Ma H, Chang F. The DYT1-interacting proteins bHLH010, bHLH089, and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome. The Plant Journal : For Cell and Molecular Biology. PMID 26216374 DOI: 10.1111/Tpj.12942  0.854
2015 Qian S, Wang Y, Ma H, Zhang L. Expansion and Functional Divergence of Jumonji C-Containing Histone Demethylases: Significance of Duplications in Ancestral Angiosperms and Vertebrates. Plant Physiology. 168: 1321-37. PMID 26059336 DOI: 10.1104/Pp.15.00520  0.819
2015 Zhang B, Wang L, Zeng L, Zhang C, Ma H. Arabidopsis TOE proteins convey a photoperiodic signal to antagonize CONSTANS and regulate flowering time. Genes & Development. 29: 975-87. PMID 25934507 DOI: 10.1101/Gad.251520.114  0.804
2015 Wang Y, Ma H. Step-wise and lineage-specific diversification of plant RNA polymerase genes and origin of the largest plant-specific subunits. The New Phytologist. PMID 25921392 DOI: 10.1111/Nph.13432  0.693
2015 Chen X, Lu S, Wang Y, Zhang X, Lv B, Luo L, Xi D, Shen J, Ma H, Ming F. OsNAC2 encoding a NAC transcription factor that affects plant height through mediating the gibberellic acid pathway in rice. The Plant Journal : For Cell and Molecular Biology. 82: 302-14. PMID 25754802 DOI: 10.1111/Tpj.12819  0.51
2015 Li Q, Zhang N, Zhang L, Ma H. Differential evolution of members of the rhomboid gene family with conservative and divergent patterns. The New Phytologist. 206: 368-380. PMID 25417867 DOI: 10.1111/Nph.13174  0.788
2015 Yang H, Chang F, You C, Cui J, Zhu G, Wang L, Zheng Y, Qi J, Ma H. Whole-genome DNA methylation patterns and complex associations with gene structure and expression during flower development in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 81: 268-81. PMID 25404462 DOI: 10.1111/Tpj.12726  0.815
2014 Zhang L, Wang L, Yang Y, Cui J, Chang F, Wang Y, Ma H. Analysis of Arabidopsis floral transcriptome: detection of new florally expressed genes and expansion of Brassicaceae-specific gene families. Frontiers in Plant Science. 5: 802. PMID 25653662 DOI: 10.3389/Fpls.2014.00802  0.851
2014 Li H, Meng F, Guo C, Wang Y, Xie X, Zhu T, Zhou S, Ma H, Shan H, Kong H. MeioBase: a comprehensive database for meiosis. Frontiers in Plant Science. 5: 728. PMID 25566299 DOI: 10.3389/Fpls.2014.00728  0.776
2014 Zeng L, Zhang Q, Sun R, Kong H, Zhang N, Ma H. Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times Nature Communications. 5: 4956-4956. PMID 25249442 DOI: 10.1038/Ncomms5956  0.802
2014 Qi J, Chen Y, Copenhaver GP, Ma H. Detection of genomic variations and DNA polymorphisms and impact on analysis of meiotic recombination and genetic mapping. Proceedings of the National Academy of Sciences of the United States of America. 111: 10007-12. PMID 24958856 DOI: 10.1073/Pnas.1321897111  0.599
2014 Wang L, Cao C, Ma Q, Zeng Q, Wang H, Cheng Z, Zhu G, Qi J, Ma H, Nian H, Wang Y. RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implications. Bmc Plant Biology. 14: 169. PMID 24939556 DOI: 10.1186/1471-2229-14-169  0.838
2014 Ma X, Sukiran NL, Ma H, Su Z. Moderate drought causes dramatic floral transcriptomic reprogramming to ensure successful reproductive development in Arabidopsis. Bmc Plant Biology. 14: 164. PMID 24928551 DOI: 10.1186/1471-2229-14-164  0.803
2014 Lu P, Wijeratne AJ, Wang Z, Copenhaver GP, Ma H. Arabidopsis PTD is required for type I crossover formation and affects recombination frequency in two different chromosomal regions. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 41: 165-75. PMID 24656236 DOI: 10.1016/J.Jgg.2014.02.001  0.82
2014 Wang H, You C, Chang F, Wang Y, Wang L, Qi J, Ma H. Alternative splicing during Arabidopsis flower development results in constitutive and stage-regulated isoforms. Frontiers in Genetics. 5: 25. PMID 24575124 DOI: 10.3389/Fgene.2014.00025  0.833
2014 Lu P, Chai M, Yang J, Ning G, Wang G, Ma H. The Arabidopsis CALLOSE DEFECTIVE MICROSPORE1 gene is required for male fertility through regulating callose metabolism during microsporogenesis. Plant Physiology. 164: 1893-904. PMID 24567187 DOI: 10.1104/Pp.113.233387  0.816
2014 Zhou M, Xu M, Wu L, Shen C, Ma H, Lin J. CbCBF from Capsella bursa-pastoris enhances cold tolerance and restrains growth in Nicotiana tabacum by antagonizing with gibberellin and affecting cell cycle signaling. Plant Molecular Biology. 85: 259-75. PMID 24532380 DOI: 10.1007/S11103-014-0181-1  0.506
2014 Chen X, Wang Y, Lv B, Li J, Luo L, Lu S, Zhang X, Ma H, Ming F. The NAC family transcription factor OsNAP confers abiotic stress response through the ABA pathway. Plant & Cell Physiology. 55: 604-19. PMID 24399239 DOI: 10.1093/pcp/pct204  0.414
2014 Wang Y, Cheng Z, Lu P, Timofejeva L, Ma H. Molecular cell biology of male meiotic chromosomes and isolation of male meiocytes in Arabidopsis thaliana. Methods of Molecular Biology. 1110: 217-230. PMID 24395259 DOI: 10.1007/978-1-4614-9408-9_10  0.806
2014 Chang F, Zhang Z, Jin Y, Ma H. Cell biological analyses of anther morphogenesis and pollen viability in Arabidopsis and rice. Methods in Molecular Biology (Clifton, N.J.). 1110: 203-16. PMID 24395258 DOI: 10.1007/978-1-4614-9408-9_9  0.686
2014 Wellmer F, Bowman JL, Davies B, Ferrándiz C, Fletcher JC, Franks RG, Graciet E, Gregis V, Ito T, Jack TP, Jiao Y, Kater MM, Ma H, Meyerowitz EM, Prunet N, et al. Flower development: open questions and future directions. Methods in Molecular Biology (Clifton, N.J.). 1110: 103-24. PMID 24395254 DOI: 10.1007/978-1-4614-9408-9_5  0.808
2014 Wang Y, Xiao R, Wang H, Cheng Z, Li W, Zhu G, Wang Y, Ma H. The Arabidopsis RAD51 paralogs RAD51B, RAD51D and XRCC2 play partially redundant roles in somatic DNA repair and gene regulation. The New Phytologist. 201: 292-304. PMID 24102485 DOI: 10.1111/Nph.12498  0.837
2013 Su Z, Ma X, Guo H, Sukiran NL, Guo B, Assmann SM, Ma H. Flower development under drought stress: morphological and transcriptomic analyses reveal acute responses and long-term acclimation in Arabidopsis. The Plant Cell. 25: 3785-807. PMID 24179129 DOI: 10.1105/Tpc.113.115428  0.841
2013 Dong X, Feng H, Xu M, Lee J, Kim YK, Lim YP, Piao Z, Park YD, Ma H, Hur Y. Comprehensive analysis of genic male sterility-related genes in Brassica rapa using a newly developed Br300K oligomeric chip. Plos One. 8: e72178. PMID 24039743 DOI: 10.1371/Journal.Pone.0072178  0.558
2013 Yang H, Zhou Y, Gu J, Xie S, Xu Y, Zhu G, Wang L, Huang J, Ma H, Yao J. Deep mRNA sequencing analysis to capture the transcriptome landscape of zebrafish embryos and larvae. Plos One. 8: e64058. PMID 23700457 DOI: 10.1371/Journal.Pone.0064058  0.699
2013 Guo C, Ge X, Ma H. The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages Plant Molecular Biology. 82: 239-253. PMID 23686450 DOI: 10.1007/S11103-013-0057-9  0.839
2013 Ma H. A battle between genomes in plant male fertility Nature Genetics. 45: 472-473. PMID 23619785 DOI: 10.1038/ng.2618  0.46
2013 Jin Y, Yang H, Wei Z, Ma H, Ge X. Rice male development under drought stress: phenotypic changes and stage-dependent transcriptomic reprogramming. Molecular Plant. 6: 1630-45. PMID 23604203 DOI: 10.1093/Mp/Sst067  0.701
2013 Chintapalli SV, Bhardwaj G, Babu J, Hadjiyianni L, Hong Y, Todd GK, Boosalis CA, Zhang Z, Zhou X, Ma H, Anishkin A, van Rossum DB, Patterson RL. Reevaluation of the evolutionary events within recA/RAD51 phylogeny. Bmc Genomics. 14: 240. PMID 23574621 DOI: 10.1186/1471-2164-14-240  0.693
2013 Zhang da Y, Ali Z, Wang CB, Xu L, Yi JX, Xu ZL, Liu XQ, He XL, Huang YH, Khan IA, Trethowan RM, Ma HX. Genome-wide sequence characterization and expression analysis of major intrinsic proteins in soybean (Glycine max L.). Plos One. 8: e56312. PMID 23437113 DOI: 10.1371/journal.pone.0056312  0.324
2013 Bliss BJ, Wanke S, Barakat A, Ayyampalayam S, Wickett N, Wall PK, Jiao Y, Landherr L, Ralph PE, Hu Y, Neinhuis C, Leebens-Mack J, Arumuganathan K, Clifton SW, Maximova SN, ... Ma H, et al. Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. Bmc Plant Biology. 13: 13. PMID 23347749 DOI: 10.1186/1471-2229-13-13  0.808
2013 Chang F, Gu Y, Ma H, Yang Z. AtPRK2 promotes ROP1 activation via RopGEFs in the control of polarized pollen tube growth. Molecular Plant. 6: 1187-201. PMID 23024212 DOI: 10.1093/Mp/Sss103  0.718
2012 Ali Z, Zhang da Y, Xu ZL, Xu L, Yi JX, He XL, Huang YH, Liu XQ, Khan AA, Trethowan RM, Ma HX. Uncovering the salt response of soybean by unraveling its wild and cultivated functional genomes using tag sequencing. Plos One. 7: e48819. PMID 23209559 DOI: 10.1371/journal.pone.0048819  0.388
2012 Wang Y, Cheng Z, Huang J, Shi Q, Hong Y, Copenhaver GP, Gong Z, Ma H. The DNA replication factor RFC1 is required for interference-sensitive meiotic crossovers in Arabidopsis thaliana. Plos Genetics. 8: e1003039. PMID 23144629 DOI: 10.1371/Journal.Pgen.1003039  0.675
2012 Zhang N, Zeng L, Shan H, Ma H. Highly conserved low‐copy nuclear genes as effective markers for phylogenetic analyses in angiosperms New Phytologist. 195: 923-937. PMID 22783877 DOI: 10.1111/J.1469-8137.2012.04212.X  0.74
2012 Feng B, Lu D, Ma X, Peng Y, Sun Y, Ning G, Ma H. Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development. The Plant Journal : For Cell and Molecular Biology. 72: 612-24. PMID 22775442 DOI: 10.1111/J.1365-313X.2012.05104.X  0.835
2012 Zhang C, Song Y, Cheng ZH, Wang YX, Zhu J, Ma H, Xu L, Yang ZN. The Arabidopsis thaliana DSB formation (AtDFO) gene is required for meiotic double-strand break formation. The Plant Journal : For Cell and Molecular Biology. 72: 271-81. PMID 22694475 DOI: 10.1111/J.1365-313X.2012.05075.X  0.734
2012 Jiao B, Ma H, Shokhirev MN, Drung A, Yang Q, Shin J, Lu S, Byron M, Kalantry S, Mercurio AM, Lawrence JB, Hoffmann A, Bach I. Paternal RLIM/Rnf12 is a survival factor for milk-producing alveolar cells. Cell. 149: 630-41. PMID 22541433 DOI: 10.1016/J.Cell.2012.02.056  0.338
2012 Zhang L, Ma H. Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions. The New Phytologist. 195: 248-63. PMID 22510098 DOI: 10.1111/J.1469-8137.2012.04143.X  0.746
2012 Lei L, Zhou SL, Ma H, Zhang LS. Expansion and diversification of the SET domain gene family following whole-genome duplications in Populus trichocarpa. Bmc Evolutionary Biology. 12: 51. PMID 22497662 DOI: 10.1186/1471-2148-12-51  0.659
2012 Ma X, Feng B, Ma H. AMS-dependent and independent regulation of anther transcriptome and comparison with those affected by other Arabidopsis anther genes. Bmc Plant Biology. 12: 23. PMID 22336428 DOI: 10.1186/1471-2229-12-23  0.809
2012 Lu P, Han X, Qi J, Yang J, Wijeratne AJ, Li T, Ma H. Analysis of Arabidopsis genome-wide variations before and after meiosis and meiotic recombination by resequencing Landsberg erecta and all four products of a single meiosis. Genome Research. 22: 508-18. PMID 22106370 DOI: 10.1101/Gr.127522.111  0.814
2012 Li C, Liu Z, Zhang Q, Wang R, Xiao L, Ma H, Chong K, Xu Y. SKP1 is involved in abscisic acid signalling to regulate seed germination, stomatal opening and root growth in Arabidopsis thaliana. Plant Cell and Environment. 35: 952-965. PMID 22074111 DOI: 10.1111/J.1365-3040.2011.02464.X  0.528
2011 Xu B, Liu L, Huang X, Ma H, Zhang Y, Du Y, Wang P, Tang X, Wang H, Kang K, Zhang S, Zhao G, Wu W, Yang Y, Chen H, et al. Metagenomic analysis of fever, thrombocytopenia and leukopenia syndrome (FTLS) in Henan Province, China: discovery of a new bunyavirus. Plos Pathogens. 7: e1002369. PMID 22114553 DOI: 10.1371/journal.ppat.1002369  0.3
2011 Wang H, Yang C, Zhang C, Wang N, Lu D, Wang J, Zhang S, Wang ZX, Ma H, Wang X. Dual role of BKI1 and 14-3-3 s in brassinosteroid signaling to link receptor with transcription factors. Developmental Cell. 21: 825-34. PMID 22075146 DOI: 10.1016/J.Devcel.2011.08.018  0.753
2011 Sun Y, Wang Y, Hu Y, Chen G, Ma H. Comparative analysis of neural transcriptomes and functional implication of unannotated intronic expression. Bmc Genomics. 12: 494. PMID 21985610 DOI: 10.1186/1471-2164-12-494  0.67
2011 Wang Y, Suo H, Zhuang C, Ma H, Yan X. Overexpression of the soybean GmWNK1 altered the sensitivity to salt and osmotic stress in Arabidopsis. Journal of Plant Physiology. 168: 2260-7. PMID 21925762 DOI: 10.1016/J.Jplph.2011.07.014  0.707
2011 Shi J, Tan H, Yu XH, Liu Y, Liang W, Ranathunge K, Franke RB, Schreiber L, Wang Y, Kai G, Shanklin J, Ma H, Zhang D. Defective pollen wall is required for anther and microspore development in rice and encodes a fatty acyl carrier protein reductase. The Plant Cell. 23: 2225-46. PMID 21705642 DOI: 10.1105/Tpc.111.087528  0.462
2011 Wang Y, Ma H. Development: A Pathway to Plant Female Germ Cells Current Biology. 21. PMID 21683904 DOI: 10.1016/J.Cub.2011.05.004  0.709
2011 Ma H, Lin Z, Hu Y. The modified castor bean catalase intron is incompletely spliced in tobacco and Arabidopsis. Plant Science : An International Journal of Experimental Plant Biology. 181: 188-94. PMID 21683884 DOI: 10.1016/j.plantsci.2011.05.006  0.326
2011 Zuccolo A, Bowers JE, Estill JC, Xiong Z, Luo M, Sebastian A, Goicoechea JL, Collura K, Yu Y, Jiao Y, Duarte J, Tang H, Ayyampalayam S, Rounsley S, Kudrna D, ... ... Ma H, et al. A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure. Genome Biology. 12: R48. PMID 21619600 DOI: 10.1186/Gb-2011-12-5-R48  0.582
2011 Zhang L, Ma H, Pugh BF. Stable and dynamic nucleosome states during a meiotic developmental process. Genome Research. 21: 875-84. PMID 21515815 DOI: 10.1101/Gr.117465.110  0.687
2011 Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, Soltis DE, Clifton SW, Schlarbaum SE, Schuster SC, Ma H, et al. Ancestral polyploidy in seed plants and angiosperms. Nature. 473: 97-100. PMID 21478875 DOI: 10.1038/Nature09916  0.569
2011 Hu W, Feng B, Ma H. Ectopic expression of the Arabidopsis MINI ZINC FINGER1 and MIF3 genes induces shoot meristems on leaf margins Plant Molecular Biology. 76: 57-68. PMID 21455630 DOI: 10.1007/S11103-011-9768-Y  0.767
2011 Zhu X, Ma H, Chen Z. Phylogenetics and evolution of Su(var)3-9 SET genes in land plants: rapid diversification in structure and function. Bmc Evolutionary Biology. 11: 63-63. PMID 21388541 DOI: 10.1186/1471-2148-11-63  0.566
2011 Yang H, Lu P, Wang Y, Ma H. The transcriptome landscape of Arabidopsis male meiocytes from high-throughput sequencing: the complexity and evolution of the meiotic process. The Plant Journal : For Cell and Molecular Biology. 65: 503-16. PMID 21208307 DOI: 10.1111/J.1365-313X.2010.04439.X  0.847
2011 Chang F, Wang Y, Wang S, Ma H. Molecular control of microsporogenesis in Arabidopsis. Current Opinion in Plant Biology. 14: 66-73. PMID 21145279 DOI: 10.1016/J.Pbi.2010.11.001  0.824
2011 Zhong Z, Ma H, Taniguchi-Ishigaki N, Nagarajan L, Becker CG, Bach I, Becker T. SSDP cofactors regulate neural patterning and differentiation of specific axonal projections Developmental Biology. 349: 213-224. PMID 21056553 DOI: 10.1016/J.Ydbio.2010.10.037  0.314
2011 Guan B, Ma H, Wang Y, Hu Y, Lin Z, Zhu Z, Hu W. Vitreoscilla hemoglobin (VHb) overexpression increases hypoxia tolerance in zebrafish (Danio rerio). Marine Biotechnology (New York, N.Y.). 13: 336-44. PMID 20694827 DOI: 10.1007/s10126-010-9305-z  0.342
2011 Liang H, Ayyampalayam S, Wickett N, Barakat A, Xu Y, Landherr L, Ralph PE, Jiao Y, Xu T, Schlarbaum SE, Ma H, Leebens-Mack JH, dePamphilis CW. Generation of a large-scale genomic resource for functional and comparative genomics in Liriodendron tulipifera L Tree Genetics and Genomes. 7: 941-954. DOI: 10.1007/S11295-011-0386-2  0.523
2010 Chanderbali AS, Yoo MJ, Zahn LM, Brockington SF, Wall PK, Gitzendanner MA, Albert VA, Leebens-Mack J, Altman NS, Ma H, dePamphilis CW, Soltis DE, Soltis PS. Conservation and canalization of gene expression during angiosperm diversification accompany the origin and evolution of the flower. Proceedings of the National Academy of Sciences of the United States of America. 107: 22570-5. PMID 21149731 DOI: 10.1073/Pnas.1013395108  0.578
2010 Ge X, Chang F, Ma H. Signaling and transcriptional control of reproductive development in Arabidopsis. Current Biology. 20. PMID 21093795 DOI: 10.1016/J.Cub.2010.09.040  0.721
2010 Shin J, Bossenz M, Chung Y, Ma H, Byron M, Taniguchi-Ishigaki N, Zhu X, Jiao B, Hall LL, Green MR, Jones SN, Hermans-Borgmeyer I, Lawrence JB, Bach I. Maternal Rnf12/RLIM is required for imprinted X-chromosome inactivation in mice. Nature. 467: 977-81. PMID 20962847 DOI: 10.1038/Nature09457  0.352
2010 Zahn LM, Ma X, Altman NS, Zhang Q, Wall PK, Tian D, Gibas CJ, Gharaibeh R, Leebens-Mack JH, Depamphilis CW, Ma H. Comparative transcriptomics among floral organs of the basal eudicot Eschscholzia californica as reference for floral evolutionary developmental studies. Genome Biology. 11: R101. PMID 20950453 DOI: 10.1186/Gb-2010-11-10-R101  0.725
2010 Wang Y, Suo H, Zheng Y, Liu K, Zhuang C, Kahle KT, Ma H, Yan X. The soybean root-specific protein kinase GmWNK1 regulates stress-responsive ABA signaling on the root system architecture. The Plant Journal : For Cell and Molecular Biology. 64: 230-42. PMID 20735771 DOI: 10.1111/J.1365-313X.2010.04320.X  0.716
2010 Ma H, Sundaresan V. Development of flowering plant gametophytes. Current Topics in Developmental Biology. 91: 379-412. PMID 20705189 DOI: 10.1016/S0070-2153(10)91013-2  0.501
2010 Zhou X, Lin Z, Ma H. Phylogenetic detection of numerous gene duplications shared by animals, fungi and plants. Genome Biology. 11: R38. PMID 20370904 DOI: 10.1186/Gb-2010-11-4-R38  0.842
2010 Zhang H, Liang W, Yang X, Luo X, Jiang N, Ma H, Zhang D. Carbon starved anther encodes a MYB domain protein that regulates sugar partitioning required for rice pollen development. The Plant Cell. 22: 672-89. PMID 20305120 DOI: 10.1105/Tpc.109.073668  0.499
2010 Ye Q, Zhu W, Li L, Zhang S, Yin Y, Ma H, Wang X. Brassinosteroids control male fertility by regulating the expression of key genes involved in Arabidopsis anther and pollen development. Proceedings of the National Academy of Sciences of the United States of America. 107: 6100-5. PMID 20231470 DOI: 10.1073/Pnas.0912333107  0.562
2010 Duarte JM, Wall PK, Edger PP, Landherr LL, Ma H, Pires JC, Leebens-Mack J, dePamphilis CW. Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels. Bmc Evolutionary Biology. 10: 61. PMID 20181251 DOI: 10.1186/1471-2148-10-61  0.684
2009 Qi J, Wijeratne AJ, Tomsho LP, Hu Y, Schuster SC, Ma H. Characterization of meiotic crossovers and gene conversion by whole-genome sequencing in Saccharomyces cerevisiae. Bmc Genomics. 10: 475. PMID 19832984 DOI: 10.1186/1471-2164-10-475  0.806
2009 Dirks R, van Dun K, de Snoo CB, van den Berg M, Lelivelt CL, Voermans W, Woudenberg L, de Wit JP, Reinink K, Schut JW, van der Zeeuw E, Vogelaar A, Freymark G, Gutteling EW, Keppel MN, ... ... Ma H, et al. Reverse breeding: a novel breeding approach based on engineered meiosis. Plant Biotechnology Journal. 7: 837-45. PMID 19811618 DOI: 10.1111/j.1467-7652.2009.00450.x  0.363
2009 Ming F, Ma H. A terminator of floral stem cells. Genes & Development. 23: 1705-8. PMID 19651982 DOI: 10.1101/gad.1834409  0.352
2009 Han X, Wu X, Chung WY, Li T, Nekrutenko A, Altman NS, Chen G, Ma H. Transcriptome of embryonic and neonatal mouse cortex by high-throughput RNA sequencing. Proceedings of the National Academy of Sciences of the United States of America. 106: 12741-6. PMID 19617558 DOI: 10.1073/Pnas.0902417106  0.635
2009 Zong J, Yao X, Yin J, Zhang D, Ma H. Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups. Gene. 447: 29-39. PMID 19616606 DOI: 10.1016/J.Gene.2009.07.004  0.523
2009 Shan H, Zahn L, Guindon S, Wall PK, Kong H, Ma H, DePamphilis CW, Leebens-Mack J. Evolution of plant MADS box transcription factors: evidence for shifts in selection associated with early angiosperm diversification and concerted gene duplications. Molecular Biology and Evolution. 26: 2229-44. PMID 19578156 DOI: 10.1093/Molbev/Msp129  0.813
2009 Chang L, Ma H, Xue HW. Functional conservation of the meiotic genes SDS and RCK in male meiosis in the monocot rice. Cell Research. 19: 768-782. PMID 19417775 DOI: 10.1038/Cr.2009.52  0.59
2009 Wang X, Kong H, Ma H. F-box proteins regulate ethylene signaling and more. Genes & Development. 23: 391-6. PMID 19240128 DOI: 10.1101/Gad.1781609  0.726
2009 Feng B, Li L, Zhou X, Stanley B, Ma H. Analysis of the Arabidopsis floral proteome: detection of over 2 000 proteins and evidence for posttranslational modifications. Journal of Integrative Plant Biology. 51: 207-23. PMID 19200160 DOI: 10.1111/J.1744-7909.2008.00787.X  0.789
2009 Xu G, Ma H, Nei M, Kong H. Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification. Proceedings of the National Academy of Sciences of the United States of America. 106: 835-40. PMID 19126682 DOI: 10.1073/Pnas.0812043106  0.803
2009 Bliss BJ, Landherr L, DePamphilis CW, Ma H, Hu Y, Maximova SN. Regeneration and plantlet devel'pment from somatic tissues of Aristolochia fimbriata Plant Cell, Tissue and Organ Culture. 98: 105-114. DOI: 10.1007/S11240-009-9543-9  0.807
2008 Hord CL, Sun YJ, Pillitteri LJ, Torii KU, Wang H, Zhang S, Ma H. Regulation of Arabidopsis early anther development by the mitogen-activated protein kinases, MPK3 and MPK6, and the ERECTA and related receptor-like kinases. Molecular Plant. 1: 645-58. PMID 19825569 DOI: 10.1093/Mp/Ssn029  0.821
2008 Zhou X, Ma H. Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence. Bmc Evolutionary Biology. 8: 294. PMID 18950507 DOI: 10.1186/1471-2148-8-294  0.653
2008 Wang E, Wang J, Zhu X, Hao W, Wang L, Li Q, Zhang L, He W, Lu B, Lin H, Ma H, Zhang G, He Z. Control of rice grain-filling and yield by a gene with a potential signature of domestication. Nature Genetics. 40: 1370-4. PMID 18820698 DOI: 10.1038/Ng.220  0.505
2008 Lin Z, Ma H, Nei M. Ultraconserved coding regions outside the homeobox of mammalian Hox genes. Bmc Evolutionary Biology. 8: 260. PMID 18816392 DOI: 10.1186/1471-2148-8-260  0.799
2008 Wang Y, Liu K, Liao H, Zhuang C, Ma H, Yan X. The plant WNK gene family and regulation of flowering time in Arabidopsis Plant Biology. 10: 548-562. PMID 18761494 DOI: 10.1111/J.1438-8677.2008.00072.X  0.59
2008 Hu W, dePamphilis CW, Ma H. Phylogenetic analysis of the plant-specific zinc finger-homeobox and mini zinc finger gene families. Journal of Integrative Plant Biology. 50: 1031-45. PMID 18713354 DOI: 10.1111/J.1744-7909.2008.00681.X  0.63
2008 Surcel A, Koshland D, Ma H, Simpson RT. Cohesin interaction with centromeric minichromosomes shows a multi-complex rod-shaped structure. Plos One. 3: e2453. PMID 18545699 DOI: 10.1371/Journal.Pone.0002453  0.789
2008 Soltis DE, Albert VA, Leebens-Mack J, Palmer JD, Wing RA, dePamphilis CW, Ma H, Carlson JE, Altman N, Kim S, Wall PK, Zuccolo A, Soltis PS. The Amborella genome: an evolutionary reference for plant biology. Genome Biology. 9: 402. PMID 18341710 DOI: 10.1186/Gb-2008-9-3-402  0.454
2008 Xu B, Li Z, Zhu Y, Wang H, Ma H, Dong A, Huang H. Arabidopsis genes AS1, AS2, and JAG negatively regulate boundary-specifying genes to promote sepal and petal development. Plant Physiology. 146: 566-75. PMID 18156293 DOI: 10.1104/Pp.107.113787  0.608
2008 Quan L, Xiao R, Li W, Oh SA, Kong H, Ambrose JC, Malcos JL, Cyr R, Twell D, Ma H. Functional divergence of the duplicated AtKIN14a and AtKIN14b genes: critical roles in Arabidopsis meiosis and gametophyte development. The Plant Journal : For Cell and Molecular Biology. 53: 1013-26. PMID 18088313 DOI: 10.1111/J.1365-313X.2007.03391.X  0.848
2008 Liang H, Carlson JE, Leebens-Mack JH, Wall PK, Mueller LA, Buzgo M, Landherr LL, Hu Y, DiLoreto DS, Ilut DC, Field D, Tanksley SD, Ma H, DePamphilis CW. An EST database for Liriodendron tulipifera L. floral buds: The first EST resource for functional and comparative genomics in Liriodendron Tree Genetics and Genomes. 4: 419-433. DOI: 10.1007/S11295-007-0120-2  0.557
2007 Ito T, Nagata N, Yoshiba Y, Ohme-Takagi M, Ma H, Shinozaki K. Arabidopsis MALE STERILITY1 encodes a PHD-type transcription factor and regulates pollen and tapetum development. The Plant Cell. 19: 3549-62. PMID 18032630 DOI: 10.1105/Tpc.107.054536  0.435
2007 Lin Z, Nei M, Ma H. The origins and early evolution of DNA mismatch repair genes--multiple horizontal gene transfers and co-evolution. Nucleic Acids Research. 35: 7591-603. PMID 17965091 DOI: 10.1093/Nar/Gkm921  0.802
2007 Güngör C, Taniguchi-Ishigaki N, Ma H, Drung A, Tursun B, Ostendorff HP, Bossenz M, Becker CG, Becker T, Bach I. Proteasomal selection of multiprotein complexes recruited by LIM homeodomain transcription factors Proceedings of the National Academy of Sciences of the United States of America. 104: 15000-15005. PMID 17848518 DOI: 10.1073/Pnas.0703738104  0.331
2007 Wijeratne AJ, Zhang W, Sun Y, Liu W, Albert R, Zheng Z, Oppenheimer DG, Zhao D, Ma H. Differential gene expression in Arabidopsis wild-type and mutant anthers: insights into anther cell differentiation and regulatory networks. The Plant Journal : For Cell and Molecular Biology. 52: 14-29. PMID 17666023 DOI: 10.1111/J.1365-313X.2007.03217.X  0.839
2007 Soltis DE, Ma H, Frohlich MW, Soltis PS, Albert VA, Oppenheimer DG, Altman NS, dePamphilis C, Leebens-Mack J. The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression Trends in Plant Science. 12: 358-367. PMID 17658290 DOI: 10.1016/J.Tplants.2007.06.012  0.573
2007 Kong H, Landherr LL, Frohlich MW, Leebens-Mack J, Ma H, dePamphilis CW. Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. The Plant Journal : For Cell and Molecular Biology. 50: 873-85. PMID 17470057 DOI: 10.1111/J.1365-313X.2007.03097.X  0.792
2007 Chen H, Karplus VJ, Ma H, Deng XW. Plant biology research comes of age in China. The Plant Cell. 18: 2855-64. PMID 17170389 DOI: 10.1105/Tpc.106.045393  0.39
2007 Yao X, Ma H, Wang J, Zhang D. Genome-Wide Comparative Analysis and Expression Pattern of TCP Gene Families in Arabidopsis thaliana and Oryza sativa Journal of Integrative Plant Biology. 49: 885-897. DOI: 10.1111/J.1744-7909.2007.00509.X  0.582
2007 Sun Y, Zhou X, Ma H. Genome‐wide Analysis of Kelch Repeat‐containing F‐box Family Journal of Integrative Plant Biology. 49: 940-952. DOI: 10.1111/J.1744-7909.2007.00498.X  0.494
2007 Sun YJ, Hord CLH, Chen CB, Ma H. Regulation of Arabidopsis Early Anther Development by Putative Cell‐Cell Signaling Molecules and Transcriptional Regulators Journal of Integrative Plant Biology. 49: 60-68. DOI: 10.1111/J.1744-7909.2006.00408.X  0.554
2007 Wijeratne AJ, Ma H. Genetic Analyses of Meiotic Recombination in Arabidopsis Journal of Integrative Plant Biology. 49: 1199-1207. DOI: 10.1111/J.1672-9072.2007.00522.X  0.579
2006 Li C, Liang Y, Chen C, Li J, Xu Y, Xu Z, Ma H, Chong K. Cloning and expression analysis of TSK1, a wheat SKP1 homologue, and functional comparison with Arabidopsis ASK1 in male meiosis and auxin signalling. Functional Plant Biology : Fpb. 33: 381-390. PMID 32689244 DOI: 10.1071/Fp06026  0.743
2006 Ma H. A Molecular Portrait of Arabidopsis Meiosis The Arabidopsis Book. 4. PMID 22303228 DOI: 10.1199/Tab.0095  0.584
2006 Li N, Zhang DS, Liu HS, Yin CS, Li XX, Liang WQ, Yuan Z, Xu B, Chu HW, Wang J, Wen TQ, Huang H, Luo D, Ma H, Zhang DB. The rice tapetum degeneration retardation gene is required for tapetum degradation and anther development. The Plant Cell. 18: 2999-3014. PMID 17138695 DOI: 10.1105/Tpc.106.044107  0.66
2006 Chu H, Qian Q, Liang W, Yin C, Tan H, Yao X, Yuan Z, Yang J, Huang H, Luo D, Ma H, Zhang D. The floral organ number4 gene encoding a putative ortholog of Arabidopsis CLAVATA3 regulates apical meristem size in rice. Plant Physiology. 142: 1039-52. PMID 17012407 DOI: 10.1104/Pp.106.086736  0.65
2006 Yang X, Timofejeva L, Ma H, Makaroff CA. The Arabidopsis SKP1 homolog ASK1 controls meiotic chromosome remodeling and release of chromatin from the nuclear membrane and nucleolus. Journal of Cell Science. 119: 3754-63. PMID 16940350 DOI: 10.1242/Jcs.03155  0.433
2006 Carlson JE, Leebens-Mack JH, Wall PK, Zahn LM, Mueller LA, Landherr LL, Hu Y, Ilut DC, Arrington JM, Choirean S, Becker A, Field D, Tanksley SD, Ma H, dePamphilis CW. EST database for early flower development in California poppy (Eschscholzia californica Cham., Papaveraceae) tags over 6,000 genes from a basal eudicot. Plant Molecular Biology. 62: 351-69. PMID 16915518 DOI: 10.1007/S11103-006-9025-Y  0.677
2006 Zhao D, Yang X, Quan L, Timofejeva L, Rigel NW, Ma H, Makaroff CA. ASK1, a SKP1 homolog, is required for nuclear reorganization, presynaptic homolog juxtaposition and the proper distribution of cohesin during meiosis in Arabidopsis. Plant Molecular Biology. 62: 99-110. PMID 16897472 DOI: 10.1007/S11103-006-9006-1  0.795
2006 Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D. Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis. Plant Physiology. 141: 1167-84. PMID 16896230 DOI: 10.1104/Pp.106.080580  0.822
2006 Zhang W, Sun Y, Timofejeva L, Chen C, Grossniklaus U, Ma H. Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor. Development (Cambridge, England). 133: 3085-95. PMID 16831835 DOI: 10.1242/Dev.02463  0.847
2006 Lin Z, Kong H, Nei M, Ma H. Origins and evolution of the recA/RAD51 gene family: evidence for ancient gene duplication and endosymbiotic gene transfer. Proceedings of the National Academy of Sciences of the United States of America. 103: 10328-33. PMID 16798872 DOI: 10.1073/Pnas.0604232103  0.852
2006 Hord CL, Chen C, Deyoung BJ, Clark SE, Ma H. The BAM1/BAM2 receptor-like kinases are important regulators of Arabidopsis early anther development. The Plant Cell. 18: 1667-80. PMID 16751349 DOI: 10.1105/Tpc.105.036871  0.804
2006 Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, DePamphilis CW. Widespread genome duplications throughout the history of flowering plants Genome Research. 16: 738-749. PMID 16702410 DOI: 10.1101/Gr.4825606  0.473
2006 Wang X, Ni W, Ge X, Zhang J, Ma H, Cao K. Proteomic identification of potential target proteins regulated by an ASK1-mediated proteolysis pathway. Cell Research. 16: 489-98. PMID 16699544 DOI: 10.1038/Sj.Cr.7310060  0.78
2006 Ru P, Xu L, Ma H, Huang H. Plant fertility defects induced by the enhanced expression of microRNA167 Cell Research. 16: 457-465. PMID 16699541 DOI: 10.1038/Sj.Cr.7310057  0.597
2006 Li W, Ma H. Double-stranded DNA breaks and gene functions in recombination and meiosis. Cell Research. 16: 402-412. PMID 16699536 DOI: 10.1038/Sj.Cr.7310052  0.808
2006 Hamant O, Ma H, Cande WZ. Genetics of meiotic prophase I in plants. Annual Review of Plant Biology. 57: 267-302. PMID 16669763 DOI: 10.1146/annurev.arplant.57.032905.105255  0.466
2006 Hu W, Ma H. Characterization of a novel putative zinc finger gene MIF1: involvement in multiple hormonal regulation of Arabidopsis development Plant Journal. 45: 399-422. PMID 16412086 DOI: 10.1111/J.1365-313X.2005.02626.X  0.597
2006 Zahn LM, Leebens-Mack JH, Arrington JM, Hu Y, Landherr LL, dePamphilis CW, Becker A, Theissen G, Ma H. Conservation and divergence in the AGAMOUS subfamily of MADS-box genes: evidence of independent sub- and neofunctionalization events. Evolution & Development. 8: 30-45. PMID 16409381 DOI: 10.1111/J.1525-142X.2006.05073.X  0.607
2006 Wijeratne AJ, Chen C, Zhang W, Timofejeva L, Ma H. The Arabidopsis thaliana PARTING DANCERS gene encoding a novel protein is required for normal meiotic homologous recombination. Molecular Biology of the Cell. 17: 1331-43. PMID 16394097 DOI: 10.1091/Mbc.E05-09-0902  0.848
2006 Duarte JM, Cui L, Wall PK, Zhang Q, Zhang X, Leebens-Mack J, Ma H, Altman N, dePamphilis CW. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Molecular Biology and Evolution. 23: 469-78. PMID 16280546 DOI: 10.1093/Molbev/Msj051  0.615
2006 Buzgo M, Soltis D, Soltis P, Kim S, Ma H, Hauser B, Bo Johansen B, Lebens-Mack J. Perianth Development in the Basal Monocot Triglochin Maritima (Juncaginaceae) Aliso. 22: 107-125. DOI: 10.5642/Aliso.20062201.09  0.485
2006 Altman N, Leebens-Mack J, Zahn L, Chanderbali A, Tian D, Werner L, Ma H, dePamphilis C. Behind the Scenes: Planning a Multispecies Microarray Experiment Chance. 19: 27-38. DOI: 10.1080/09332480.2006.10722799  0.456
2006 Zahn LM, Feng B, Ma H. Beyond the ABC‐Model: Regulation of Floral Homeotic Genes Advances in Botanical Research. 44: 163-207. DOI: 10.1016/S0065-2296(06)44004-0  0.663
2005 Chu HW, Liu HS, Li H, Wang HM, Wei JL, Li N, Ding SY, Huang H, Ma H, Huang CF, Luo D, Yuan Z, Liu WX, Zhang DB. [Genetic analysis and mapping of the rice leafy-hull mutant Oslh]. Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao = Journal of Plant Physiology and Molecular Biology. 31: 594-8. PMID 16361786  0.521
2005 Kim S, Koh J, Yoo MJ, Kong H, Hu Y, Ma H, Soltis PS, Soltis DE. Expression of floral MADS-box genes in basal angiosperms: implications for the evolution of floral regulators. The Plant Journal : For Cell and Molecular Biology. 43: 724-44. PMID 16115069 DOI: 10.1111/J.1365-313X.2005.02487.X  0.769
2005 Chen C, Zhang W, Timofejeva L, Gerardin Y, Ma H. The Arabidopsis ROCK-N-ROLLERS gene encodes a homolog of the yeast ATP-dependent DNA helicase MER3 and is required for normal meiotic crossover formation. The Plant Journal : For Cell and Molecular Biology. 43: 321-34. PMID 16045469 DOI: 10.1111/J.1365-313X.2005.02461.X  0.758
2005 Zhang X, Feng B, Zhang Q, Zhang D, Altman N, Ma H. Genome-wide expression profiling and identification of gene activities during early flower development in Arabidopsis. Plant Molecular Biology. 58: 401-19. PMID 16021403 DOI: 10.1007/S11103-005-5434-6  0.782
2005 Li W, Yang X, Lin Z, Timofejeva L, Xiao R, Makaroff CA, Ma H. The AtRAD51C gene is required for normal meiotic chromosome synapsis and double-stranded break repair in Arabidopsis. Plant Physiology. 138: 965-76. PMID 15923332 DOI: 10.1104/Pp.104.058347  0.823
2005 Ma H. Molecular genetic analyses of microsporogenesis and microgametogenesis in flowering plants Annual Review of Plant Biology. 56: 393-434. PMID 15862102 DOI: 10.1146/Annurev.Arplant.55.031903.141717  0.592
2005 Albert VA, Soltis DE, Carlson JE, Farmerie WG, Wall PK, Ilut DC, Solow TM, Mueller LA, Landherr LL, Hu Y, Buzgo M, Kim S, Yoo MJ, Frohlich MW, Perl-Treves R, ... ... Ma H, et al. Floral gene resources from basal angiosperms for comparative genomics research. Bmc Plant Biology. 5: 5. PMID 15799777 DOI: 10.1186/1471-2229-5-5  0.836
2005 Zahn LM, Kong H, Leebens-Mack JH, Kim S, Soltis PS, Landherr LL, Soltis DE, Depamphilis CW, Ma H. The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history. Genetics. 169: 2209-23. PMID 15687268 DOI: 10.1534/Genetics.104.037770  0.817
2005 Ambrose JC, Li W, Marcus A, Ma H, Cyr R. A minus-end-directed kinesin with plus-end tracking protein activity is involved in spindle morphogenesis. Molecular Biology of the Cell. 16: 1584-92. PMID 15659646 DOI: 10.1091/Mbc.E04-10-0935  0.788
2005 Chen CB, Xu YY, Ma H, Chong K. Cell Biological Characterization of Male Meiosis and Pollen Development in Rice Journal of Integrative Plant Biology. 47: 734-744. DOI: 10.1111/J.1744-7909.2005.00102.X  0.488
2005 Kim S, Koh J, Ma H, Hu Y, Endress PK, Hauser BA, Buzgo M, Soltis PS, Soltis DE. Sequence and Expression Studies of A‐, B‐, and E‐Class MADS‐Box Homologues in Eupomatia (Eupomatiaceae): Support for the Bracteate Origin of the Calyptra International Journal of Plant Sciences. 166: 185-198. DOI: 10.1086/427479  0.476
2004 Yang X, Ma H, Makaroff CA. Characterization of an unusual Ds transposable element in Arabidopsis thaliana: insertion of an abortive circular transposition intermediate. Plant Molecular Biology. 55: 905-17. PMID 15604724 DOI: 10.1007/S11103-004-2225-4  0.461
2004 Shao M, Zheng H, Hu Y, Liu D, Jang JC, Ma H, Huang H. The GAOLAOZHUANGREN1 gene encodes a putative glycosyltransferase that is critical for normal development and carbohydrate metabolism. Plant & Cell Physiology. 45: 1453-60. PMID 15564529 DOI: 10.1093/pcp/pch168  0.616
2004 Li W, Chen C, Markmann-Mulisch U, Timofejeva L, Schmelzer E, Ma H, Reiss B. The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis. Proceedings of the National Academy of Sciences of the United States of America. 101: 10596-601. PMID 15249667 DOI: 10.1073/Pnas.0404110101  0.828
2004 Wang G, Kong H, Sun Y, Zhang X, Zhang W, Altman N, DePamphilis CW, Ma H. Genome-wide analysis of the cyclin family in Arabidopsis and comparative phylogenetic analysis of plant cyclin-like proteins. Plant Physiology. 135: 1084-99. PMID 15208425 DOI: 10.1104/Pp.104.040436  0.836
2004 Buzgo M, Soltis DE, Soltis PS, Ma H. Towards a comprehensive integration of morphological and genetic studies of floral development. Trends in Plant Science. 9: 164-73. PMID 15063866 DOI: 10.1016/J.Tplants.2004.02.003  0.521
2004 Ni W, Xie D, Hobbie L, Feng B, Zhao D, Akkara J, Ma H. Regulation of Flower Development in Arabidopsis by SCF Complexes Plant Physiology. 134: 1574-1585. PMID 15047903 DOI: 10.1104/Pp.103.031971  0.836
2004 Nam J, Kim J, Lee S, An G, Ma H, Nei M. Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms. Proceedings of the National Academy of Sciences of the United States of America. 101: 1910-5. PMID 14764899 DOI: 10.1073/Pnas.0308430100  0.673
2004 Liu F, Ni W, Griffith ME, Huang Z, Chang C, Peng W, Ma H, Xie D. The ASK1 and ASK2 Genes Are Essential for Arabidopsis Early Development Plant Cell. 16: 5-20. PMID 14688296 DOI: 10.1105/Tpc.017772  0.841
2004 Kong H, Leebens-Mack J, Ni W, dePamphilis CW, Ma H. Highly heterogeneous rates of evolution in the SKP1 gene family in plants and animals: functional and evolutionary implications. Molecular Biology and Evolution. 21: 117-28. PMID 14595103 DOI: 10.1093/Molbev/Msh001  0.834
2003 Hu W, Wang Y, Bowers C, Ma H. Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. Plant Molecular Biology. 53: 545-63. PMID 15010618 DOI: 10.1023/B:Plan.0000019063.18097.62  0.627
2003 Zhao D, Han T, Risseeuw E, Crosby WL, Ma H. Conservation and divergence of ASK1 and ASK2 gene functions during male meiosis in Arabidopsis thaliana. Plant Molecular Biology. 53: 163-73. PMID 14756314 DOI: 10.1023/B:Plan.0000009273.81702.B5  0.801
2003 Zhang S, Raina S, Li H, Li J, Dec E, Ma H, Huang H, Fedoroff NV. Resources for targeted insertional and deletional mutagenesis in Arabidopsis. Plant Molecular Biology. 53: 133-50. PMID 14756312 DOI: 10.1023/B:Plan.0000009271.08420.D9  0.427
2003 Ma H. Plant Reproduction: GABA Gradient, Guidance and Growth Current Biology. 13. PMID 14588259 DOI: 10.1016/J.Cub.2003.10.015  0.424
2003 Zhao D, Ni W, Feng B, Han T, Petrasek MG, Ma H. Members of the Arabidopsis-SKP1-like Gene Family Exhibit a Variety of Expression Patterns and May Play Diverse Roles in Arabidopsis Plant Physiology. 133: 203-217. PMID 12970487 DOI: 10.1104/Pp.103.024703  0.854
2003 Yang X, Makaroff CA, Ma H. The Arabidopsis MALE MEIOCYTE DEATH1 gene encodes a PHD-finger protein that is required for male meiosis. The Plant Cell. 15: 1281-95. PMID 12782723 DOI: 10.1105/Tpc.010447  0.566
2003 Nam J, dePamphilis CW, Ma H, Nei M. Antiquity and evolution of the MADS-box gene family controlling flower development in plants. Molecular Biology and Evolution. 20: 1435-47. PMID 12777513 DOI: 10.1093/Molbev/Msg152  0.695
2003 Marcus AI, Li W, Ma H, Cyr RJ. A kinesin mutant with an atypical bipolar spindle undergoes normal mitosis Molecular Biology of the Cell. 14: 1717-1726. PMID 12686621 DOI: 10.1091/Mbc.E02-09-0586  0.364
2003 Li W, Ma H. Gametophyte development. Current Biology : Cb. 12: R718-21. PMID 12419198 DOI: 10.1016/s0960-9822(02)01245-9  0.773
2002 Xu L, Liu F, Lechner E, Genschik P, Crosby WL, Ma H, Peng W, Huang D, Xie D. The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. The Plant Cell. 14: 1919-35. PMID 12172031 DOI: 10.1105/Tpc.003368  0.777
2002 Zhao DZ, Wang GF, Speal B, Ma H. The EXCESS MICROSPOROCYTES1 gene encodes a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in the Arabidopsis anther Genes & Development. 16: 2021-2031. PMID 12154130 DOI: 10.1101/Gad.997902  0.825
2002 Azumi Y, Liu D, Zhao D, Li W, Wang G, Hu Y, Ma H. Homolog interaction during meiotic prophase I in Arabidopsis requires the SOLO DANCERS gene encoding a novel cyclin-like protein. The Embo Journal. 21: 3081-95. PMID 12065421 DOI: 10.1093/Emboj/Cdf285  0.821
2002 Chen C, Marcus A, Li W, Hu Y, Calzada JP, Grossniklaus U, Cyr RJ, Ma H. The Arabidopsis ATK1 gene is required for spindle morphogenesis in male meiosis. Development (Cambridge, England). 129: 2401-9. PMID 11973272  0.83
2002 Soltis DE, Soltis PS, Albert VA, Oppenheimer DG, DePamphilis CW, Ma H, Frohlich MW, Theißen G. Missing links: The genetic architecture of flower and floral diversification Trends in Plant Science. 7: 22-31. PMID 11804823 DOI: 10.1016/S1360-1385(01)02098-2  0.529
2001 Ma H. Plant G proteins: The different faces of GPA1 Current Biology. 11. PMID 11696344 DOI: 10.1016/S0960-9822(01)00519-X  0.47
2000 Zhao D, Ma H. Male fertility: A case of enzyme identity Current Biology. 10. PMID 11137026 DOI: 10.1016/S0960-9822(00)00848-4  0.725
2000 Ma H. Gene regulation: Better late than never? Current Biology. 10. PMID 10837215 DOI: 10.1016/S0960-9822(00)00484-X  0.53
2000 Ma H, DePamphilis C. The ABCs of floral evolution Cell. 101: 5-8. PMID 10778850 DOI: 10.1016/S0092-8674(00)80618-2  0.445
1999 Zhao D, Yang M, Solava J, Ma H. The ASK1 gene regulates development and interacts with the UFO gene to control floral organ identity in Arabidopsis Developmental Genetics. 25: 209-223. PMID 10528262 DOI: 10.1002/(Sici)1520-6408(1999)25:3<209::Aid-Dvg4>3.0.Co;2-O  0.547
1999 Ma H. Seed development: With or without sex? Current Biology. 9. PMID 10508576 DOI: 10.1016/S0960-9822(99)80411-4  0.502
1999 Yang M, Hu Y, Lodhi M, McCombie WR, Ma H. The Arabidopsis SKP1-LIKE1 gene is essential for male meiosis and may control homologue separation. Proceedings of the National Academy of Sciences of the United States of America. 96: 11416-21. PMID 10500191 DOI: 10.1073/Pnas.96.20.11416  0.52
1999 Gray WM, del Pozo JC, Walker L, Hobbie L, Risseeuw E, Banks T, Crosby WL, Yang M, Ma H, Estelle M. Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana. Genes & Development. 13: 1678-91. PMID 10398681 DOI: 10.1101/Gad.13.13.1678  0.47
1999 Li F, Flanagan CA, Zhao Y, Ma H, Huang H. Assignment of 44 Ds Insertions to the Linkage Map of Arabidopsis Plant Molecular Biology Reporter. 17: 109-122. DOI: 10.1023/A:1007549429131  0.52
1998 Ma H. Flowering time: From photoperiodism to florigen Current Biology. 8. PMID 9768355 DOI: 10.1016/S0960-9822(98)70437-3  0.445
1998 Rubinelli P, Hu Y, Ma H. Identification, sequence analysis and expression studies of novel anther-specific genes of Arabidopsis thaliana Plant Molecular Biology. 37: 607-619. PMID 9687065 DOI: 10.1023/A:1005964431302  0.558
1998 Huang H, Ma H. The Nature of the Arabidopsis fon1 Mutations The Plant Cell. 10: 3-4. PMID 9477568 DOI: 10.1105/Tpc.10.1.3  0.394
1998 Ma H. To be, or not to be, a flower — control of floral meristem identity Trends in Genetics. 14: 26-32. PMID 9448463 DOI: 10.1016/S0168-9525(97)01309-7  0.553
1997 Fan H, Hu Y, Tudor M, Ma H. Specific interactions between the K domains of AG and AGLs, members of the MADS domain family of DNA binding proteins. Plant Journal. 12: 999-1010. PMID 9418042 DOI: 10.1046/J.1365-313X.1997.12050999.X  0.438
1997 Ma H. The on and off of floral regulatory genes Cell. 89: 821-824. PMID 9200599 DOI: 10.1016/S0092-8674(00)80265-2  0.532
1997 Mizukami Y, Ma H. Determination of Arabidopsis floral meristem identity by AGAMOUS. The Plant Cell. 9: 393-408. PMID 9090883 DOI: 10.1105/Tpc.9.3.393  0.458
1997 Huang H, Ma H. FON1, an Arabidopsis gene that terminates floral meristem activity and controls flower organ number. The Plant Cell. 9: 115-134. PMID 9061945 DOI: 10.1105/Tpc.9.2.115  0.53
1996 Flanagan CA, Hu Y, Ma H. Specific expression of the AGL1 MADS-box gene suggests regulatory functions in Arabidopsis gynoecium and ovule development. The Plant Journal : For Cell and Molecular Biology. 10: 343-53. PMID 8771788 DOI: 10.1046/J.1365-313X.1996.10020343.X  0.57
1996 Mizukami Y, Huang H, Tudor M, Hu Y, Ma H. Functional domains of the floral regulator AGAMOUS: characterization of the DNA binding domain and analysis of dominant negative mutations. The Plant Cell. 8: 831-845. PMID 8672883 DOI: 10.1105/Tpc.8.5.831  0.426
1996 Huang H, Tudor M, Su T, Zhang Y, Hu Y, Ma H. DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation The Plant Cell. 8: 81-94. PMID 8597661 DOI: 10.1105/Tpc.8.1.81  0.444
1995 Ma H, Weiss CA. In vitro analysis of G-protein functions. Methods in Cell Biology. 49: 471-485. PMID 8531778 DOI: 10.1016/S0091-679X(08)61474-0  0.392
1995 Mizukami Y, Ma H. Separation of AG function in floral meristem determinacy from that in reproductive organ identity by expressing antisense AG RNA. Plant Molecular Biology. 28: 767-784. PMID 7640351 DOI: 10.1007/Bf00042064  0.448
1995 Huang H, Tudor M, Weiss CA, Hu Y, Ma H. The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein. Plant Molecular Biology. 28: 549-567. PMID 7632923 DOI: 10.1007/Bf00020401  0.519
1995 Sundaresan V, Springer P, Volpe T, Haward S, Jones JD, Dean C, Ma H, Martienssen R. Patterns of gene action in plant development revealed by enhancer trap and gene trap transposable elements. Genes & Development. 9: 1797-810. PMID 7622040 DOI: 10.1101/Gad.9.14.1797  0.564
1995 Ma H. Use of cosmid libraries in plant transformations Methods in Molecular Biology (Clifton, N.J.). 44: 351-367. PMID 7581678 DOI: 10.1385/0-89603-302-3:351  0.307
1994 Flanagan CA, Ma H. Spatially and temporally regulated expression of the MADS-box gene AGL2 in wild-type and mutant arabidopsis flowers. Plant Molecular Biology. 26: 581-95. PMID 7948914 DOI: 10.1007/Bf00013745  0.526
1994 Weiss CA, Garnaat CW, Mukai K, Hu Y, Ma H. Isolation of cDNAs encoding guanine nucleotide-binding protein beta-subunit homologues from maize (ZGB1) and Arabidopsis (AGB1). Proceedings of the National Academy of Sciences of the United States of America. 91: 9554-9558. PMID 7937804 DOI: 10.1073/Pnas.91.20.9554  0.464
1994 Ma H. The unfolding drama of flower development: recent results from genetic and molecular analyses. Genes & Development. 8: 745-756. PMID 7926764 DOI: 10.1101/Gad.8.7.745  0.58
1994 Meyerowitz EM, Ma H. APPENDIX B Genetic Variations of Arabidopsis thaliana Cold Spring Harbor Monograph Archive. 27: 1161-1268. DOI: 10.1101/087969428.27.1161  0.499
1994 Huang H, Weiss CA, Ma H. Regulated expression of the Arabidopsis G protein α subunit gene GPA1. International Journal of Plant Sciences. 155: 3-14. DOI: 10.1086/297142  0.56
1993 Ma H. Protein phosphorylation in plants: enzymes, substrates and regulators Trends in Genetics. 9: 228-230. PMID 8397456 DOI: 10.1016/0168-9525(93)90075-S  0.468
1993 Weiss CA, Huang H, Ma H. Immunolocalization of the G protein alpha subunit encoded by the GPA1 gene in Arabidopsis The Plant Cell. 5: 1513-1528. PMID 8312737 DOI: 10.1105/Tpc.5.11.1513  0.528
1992 Ma H, Yanofsky MF, Klee HJ, Bowman JL, Meyerowitz EM. Vectors for plant transformation and cosmid libraries Gene. 117: 161-167. PMID 1639265 DOI: 10.1016/0378-1119(92)90725-5  0.794
1992 Mandel MA, Bowman JL, Kempin SA, Ma H, Meyerowitz EM, Yanofsky MF. Manipulation of flower structure in transgenic tobacco Cell. 71: 133-143. PMID 1356631 DOI: 10.1016/0092-8674(92)90272-E  0.818
1992 Mizukami Y, Ma H. Ectopic expression of the floral homeotic gene AGAMOUS in transgenic Arabidopsis plants alters floral organ identity Cell. 71: 119-131. PMID 1356630 DOI: 10.1016/0092-8674(92)90271-D  0.483
1991 Ma H, Yanofsky MF, Huang H. Isolation and sequence analysis of TGA1 cDNAs encoding a tomato G protein alpha subunit. Gene. 107: 189-95. PMID 1748292 DOI: 10.1016/0378-1119(91)90318-6  0.662
1991 Ma H, Yanofsky MF, Meyerowitz EM. AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes. Genes & Development. 5: 484-95. PMID 1672119 DOI: 10.1101/Gad.5.3.484  0.786
1990 Ma H, Bloom LM, Walsh CT, Botstein D. The residual enzymatic phosphorylation activity of hexokinase II mutants is correlated with glucose repression in Saccharomyces cerevisiae. Molecular and Cellular Biology. 9: 5643-9. PMID 2685572 DOI: 10.1128/Mcb.9.12.5643  0.548
1990 Ma H, Bloom LM, Zhu ZM, Walsh CT, Botstein D. Isolation and characterization of mutations in the HXK2 gene of Saccharomyces cerevisiae. Molecular and Cellular Biology. 9: 5630-42. PMID 2685571 DOI: 10.1128/Mcb.9.12.5630  0.578
1990 Stearns T, Ma H, Botstein D. Manipulating yeast genome using plasmid vectors. Methods in Enzymology. 185: 280-97. PMID 2199782 DOI: 10.1016/0076-6879(90)85025-J  0.75
1990 Ma H, Yanofsky MF, Meyerowitz EM. Molecular cloning and characterization of GPA1, a G protein alpha subunit gene from Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 87: 3821-5. PMID 2111018 DOI: 10.1073/Pnas.87.10.3821  0.733
1990 Yanofsky MF, Ma H, Bowman JL, Drews GN, Feldmann KA, Meyerowitz EM. The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors Nature. 346: 35-39. PMID 1973265 DOI: 10.1038/346035A0  0.839
1989 Ma H, Bloom LM, Dakin SE, Walsh CT, Botstein D. The 15 N-terminal amino acids of hexokinase II are not required for in vivo function: analysis of a truncated form of hexokinase II in Saccharomyces cerevisiae. Proteins. 5: 218-23. PMID 2674934 DOI: 10.1002/Prot.340050305  0.554
1987 Ma H, Botstein D. Effects of null mutations in the hexokinase genes of Saccharomyces cerevisiae on catabolite repression. Molecular and Cellular Biology. 6: 4046-52. PMID 3540605 DOI: 10.1128/MCB.6.11.4046  0.546
1987 Ma H, Kunes S, Schatz PJ, Botstein D. Plasmid construction by homologous recombination in yeast. Gene. 58: 201-16. PMID 2828185 DOI: 10.1016/0378-1119(87)90376-3  0.77
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