Daniel Chitwood - Publications

Affiliations: 
2018- Horticulture Michigan State University, East Lansing, MI 
Website:
https://cmse.msu.edu/directory/faculty/dan-chitwood/

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Bryson AE, Wilson Brown M, Mullins J, Dong W, Bahmani K, Bornowski N, Chiu C, Engelgau P, Gettings B, Gomezcano F, Gregory LM, Haber AC, Hoh D, Jennings EE, Ji Z, ... ... Chitwood DH, et al. Composite modeling of leaf shape along shoots discriminates species better than individual leaves. Applications in Plant Sciences. 8: e11404. PMID 33344095 DOI: 10.1002/aps3.11404  0.68
2019 Rowland SD, Zumstein K, Nakayama H, Cheng Z, Flores AM, Chitwood DH, Maloof JN, Sinha NR. Leaf shape is a predictor of fruit quality and cultivar performance in tomato. The New Phytologist. PMID 31880321 DOI: 10.1111/Nph.16403  0.96
2018 Skopelitis DS, Hill K, Klesen S, Marco CF, von Born P, Chitwood DH, Timmermans MCP. Gating of miRNA movement at defined cell-cell interfaces governs their impact as positional signals. Nature Communications. 9: 3107. PMID 30082703 DOI: 10.1038/S41467-018-05571-0  0.52
2018 Li M, An H, Angelovici R, Bagaza C, Batushansky A, Clark L, Coneva V, Donoghue MJ, Edwards E, Fajardo D, Fang H, Frank MH, Gallaher T, Gebken S, Hill T, ... ... Chitwood DH, et al. Topological Data Analysis as a Morphometric Method: Using Persistent Homology to Demarcate a Leaf Morphospace. Frontiers in Plant Science. 9: 553. PMID 29922307 DOI: 10.3389/Fpls.2018.00553  0.68
2017 Bucksch A, Atta-Boateng A, Azihou AF, Battogtokh D, Baumgartner A, Binder BM, Braybrook SA, Chang C, Coneva V, DeWitt TJ, Fletcher AG, Gehan MA, Diaz-Martinez DH, Hong L, Iyer-Pascuzzi AS, ... ... Chitwood DH, et al. Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences. Frontiers in Plant Science. 8: 900. PMID 28659934 DOI: 10.3389/Fpls.2017.00900  0.6
2016 Andres RJ, Coneva V, Frank MH, Tuttle JR, Samayoa LF, Han SW, Kaur B, Zhu L, Fang H, Bowman DT, Rojas-Pierce M, Haigler CH, Jones DC, Holland JB, Chitwood DH, et al. Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.). Proceedings of the National Academy of Sciences of the United States of America. PMID 27999177 DOI: 10.1073/Pnas.1613593114  0.68
2016 Martinez CC, Chitwood DH, Smith RS, Sinha NR. Left-right leaf asymmetry in decussate and distichous phyllotactic systems. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 27821524 DOI: 10.1098/Rstb.2015.0412  0.96
2016 Martinez CC, Koenig D, Chitwood DH, Sinha NR. A Sister of PIN1 gene in tomato (Solanum lycopersicum) defines leaf and flower organ initiation patterns by maintaining epidermal auxin flux. Developmental Biology. PMID 27554165 DOI: 10.1016/J.Ydbio.2016.08.011  0.96
2016 Fulop D, Ranjan A, Ofner I, Covington MF, Chitwood DH, West D, Ichihashi Y, Headland L, Zamir D, Maloof JN, Sinha NR. A New Advanced Backcross Tomato Population Enables High Resolution Leaf QTL Mapping and Gene Identification. G3 (Bethesda, Md.). PMID 27510891 DOI: 10.1534/G3.116.030536  0.96
2016 Ranjan A, Budke J, Rowland SD, Chitwood DH, Kumar R, Carriedo LG, Ichihashi Y, Zumstein K, Maloof JN, Sinha N. eQTL regulating Transcript Levels Associated with Diverse Biological Processes in Tomato. Plant Physiology. PMID 27418589 DOI: 10.1104/Pp.16.00289  0.92
2016 Frank MH, Chitwood DH. Plant Chimeras: the good, the bad, and the'Bizzaria'. Developmental Biology. PMID 27381079 DOI: 10.1016/j.ydbio.2016.07.003  0.68
2016 Chitwood DH, Sinha NR. Evolutionary and Environmental Forces Sculpting Leaf Development. Current Biology : Cb. 26: R297-306. PMID 27046820 DOI: 10.1016/J.Cub.2016.02.033  0.92
2016 Fahlgren N, Bart R, Herrera-Estrella L, Rellán-Álvarez R, Chitwood DH, Dinneny JR. Plant scientists: GM technology is safe. Science (New York, N.Y.). 351: 824. PMID 26912883 DOI: 10.1126/Science.351.6275.824-A  0.92
2016 Chitwood DH, Rundell SM, Li DY, Woodford QL, Yu TT, Lopez JR, Greenblatt D, Kang J, Londo JP. Climate and developmental plasticity: interannual variability in grapevine leaf morphology. Plant Physiology. PMID 26826220 DOI: 10.1104/Pp.15.01825  0.92
2015 Warschefsky EJ, Klein LL, Frank MH, Chitwood DH, Londo JP, von Wettberg EJ, Miller AJ. Rootstocks: Diversity, Domestication, and Impacts on Shoot Phenotypes. Trends in Plant Science. PMID 26698413 DOI: 10.1016/J.Tplants.2015.11.008  0.92
2015 Ostria-Gallardo E, Ranjan A, Chitwood DH, Kumar R, Townsley BT, Ichihashi Y, Corcuera LJ, Sinha NR. Transcriptomic analysis suggests a key role for SQUAMOSA PROMOTER BINDING PROTEIN LIKE, NAC and YUCCA genes in the heteroblastic development of the temperate rainforest tree Gevuina avellana (Proteaceae). The New Phytologist. PMID 26680017 DOI: 10.1111/Nph.13776  0.92
2015 Chitwood DH, Klein LL, O'Hanlon R, Chacko S, Greg M, Kitchen C, Miller AJ, Londo JP. Latent developmental and evolutionary shapes embedded within the grapevine leaf. The New Phytologist. PMID 26580864 DOI: 10.1111/Nph.13754  0.92
2015 Chitwood DH, Kumar R, Ranjan A, Pelletier JM, Townsley B, Ichihashi Y, Martinez CC, Zumstein K, Harada JJ, Maloof JN, Sinha N. Light-induced indeterminacy alters shade avoiding tomato leaf morphology. Plant Physiology. PMID 26381315 DOI: 10.1104/Pp.15.01229  0.92
2015 Ranjan A, Townsley BT, Ichihashi Y, Sinha NR, Chitwood DH. An intracellular transcriptomic atlas of the giant coenocyte Caulerpa taxifolia. Plos Genetics. 11: e1004900. PMID 25569326 DOI: 10.1371/Journal.Pgen.1004900  0.92
2014 Chitwood DH, Sinha NR. Plant development: small RNAs and the metamorphosis of leaves. Current Biology : Cb. 24: R1087-9. PMID 25458218 DOI: 10.1016/J.Cub.2014.10.013  0.96
2014 Chitwood DH, Ranjan A, Kumar R, Ichihashi Y, Zumstein K, Headland LR, Ostria-Gallardo E, Aguilar-Martínez JA, Bush S, Carriedo L, Fulop D, Martinez CC, Peng J, Maloof JN, Sinha NR. Resolving distinct genetic regulators of tomato leaf shape within a heteroblastic and ontogenetic context. The Plant Cell. 26: 3616-29. PMID 25271240 DOI: 10.1105/Tpc.114.130112  0.92
2014 Ichihashi Y, Aguilar-Martínez JA, Farhi M, Chitwood DH, Kumar R, Millon LV, Peng J, Maloof JN, Sinha NR. Evolutionary developmental transcriptomics reveals a gene network module regulating interspecific diversity in plant leaf shape. Proceedings of the National Academy of Sciences of the United States of America. 111: E2616-21. PMID 24927584 DOI: 10.1073/Pnas.1402835111  0.96
2014 Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, et al. A modern ampelography: a genetic basis for leaf shape and venation patterning in grape. Plant Physiology. 164: 259-72. PMID 24285849 DOI: 10.1104/Pp.113.229708  0.92
2013 Chitwood DH, Kumar R, Headland LR, Ranjan A, Covington MF, Ichihashi Y, Fulop D, Jiménez-Gómez JM, Peng J, Maloof JN, Sinha NR. A quantitative genetic basis for leaf morphology in a set of precisely defined tomato introgression lines. The Plant Cell. 25: 2465-81. PMID 23872539 DOI: 10.1105/Tpc.113.112391  0.92
2013 Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, et al. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62. PMID 23803858 DOI: 10.1073/Pnas.1309606110  0.92
2013 Chitwood DH, Maloof JN, Sinha NR. Dynamic transcriptomic profiles between tomato and a wild relative reflect distinct developmental architectures. Plant Physiology. 162: 537-52. PMID 23585653 DOI: 10.1104/Pp.112.213546  0.96
2013 Chitwood DH, Sinha NR. A census of cells in time: quantitative genetics meets developmental biology. Current Opinion in Plant Biology. 16: 92-9. PMID 23218243 DOI: 10.1016/J.Pbi.2012.11.003  0.96
2012 Kumar R, Ichihashi Y, Kimura S, Chitwood DH, Headland LR, Peng J, Maloof JN, Sinha NR. A High-Throughput Method for Illumina RNA-Seq Library Preparation. Frontiers in Plant Science. 3: 202. PMID 22973283 DOI: 10.3389/Fpls.2012.00202  0.96
2012 Chitwood DH, Naylor DT, Thammapichai P, Weeger AC, Headland LR, Sinha NR. Conflict between Intrinsic Leaf Asymmetry and Phyllotaxis in the Resupinate Leaves of Alstroemeria psittacina. Frontiers in Plant Science. 3: 182. PMID 22908025 DOI: 10.3389/Fpls.2012.00182  0.96
2012 Chitwood DH, Headland LR, Ranjan A, Martinez CC, Braybrook SA, Koenig DP, Kuhlemeier C, Smith RS, Sinha NR. Leaf asymmetry as a developmental constraint imposed by auxin-dependent phyllotactic patterning. The Plant Cell. 24: 2318-27. PMID 22722959 DOI: 10.1105/Tpc.112.098798  0.92
2012 Chitwood DH, Headland LR, Filiault DL, Kumar R, Jiménez-Gómez JM, Schrager AV, Park DS, Peng J, Sinha NR, Maloof JN. Native environment modulates leaf size and response to simulated foliar shade across wild tomato species. Plos One. 7: e29570. PMID 22253737 DOI: 10.1371/Journal.Pone.0029570  0.96
2012 Chitwood DH, Headland LR, Kumar R, Peng J, Maloof JN, Sinha NR. The developmental trajectory of leaflet morphology in wild tomato species. Plant Physiology. 158: 1230-40. PMID 22247269 DOI: 10.1104/Pp.111.192518  0.96
2010 Chitwood DH, Timmermans MC. Small RNAs are on the move. Nature. 467: 415-9. PMID 20864994 DOI: 10.1038/nature09351  1
2009 Husbands AY, Chitwood DH, Plavskin Y, Timmermans MC. Signals and prepatterns: new insights into organ polarity in plants. Genes & Development. 23: 1986-97. PMID 19723761 DOI: 10.1101/Gad.1819909  1
2009 Chitwood DH, Nogueira FT, Howell MD, Montgomery TA, Carrington JC, Timmermans MC. Pattern formation via small RNA mobility. Genes & Development. 23: 549-54. PMID 19270155 DOI: 10.1101/Gad.1770009  0.92
2009 Nogueira FT, Chitwood DH, Madi S, Ohtsu K, Schnable PS, Scanlon MJ, Timmermans MC. Regulation of small RNA accumulation in the maize shoot apex. Plos Genetics. 5: e1000320. PMID 19119413 DOI: 10.1371/Journal.Pgen.1000320  0.92
2007 Chitwood DH, Timmermans MC. Target mimics modulate miRNAs. Nature Genetics. 39: 935-6. PMID 17660806 DOI: 10.1038/ng0807-935  1
2007 Nogueira FT, Madi S, Chitwood DH, Juarez MT, Timmermans MC. Two small regulatory RNAs establish opposing fates of a developmental axis. Genes & Development. 21: 750-5. PMID 17403777 DOI: 10.1101/Gad.1528607  0.92
2007 Chitwood DH, Guo M, Nogueira FT, Timmermans MC. Establishing leaf polarity: the role of small RNAs and positional signals in the shoot apex. Development (Cambridge, England). 134: 813-23. PMID 17251271 DOI: 10.1242/Dev.000497  1
2006 Nogueira FT, Sarkar AK, Chitwood DH, Timmermans MC. Organ polarity in plants is specified through the opposing activity of two distinct small regulatory RNAs. Cold Spring Harbor Symposia On Quantitative Biology. 71: 157-64. PMID 17381292 DOI: 10.1101/Sqb.2006.71.045  1
2006 Irvine DV, Zaratiegui M, Tolia NH, Goto DB, Chitwood DH, Vaughn MW, Joshua-Tor L, Martienssen RA. Argonaute slicing is required for heterochromatic silencing and spreading. Science (New York, N.Y.). 313: 1134-7. PMID 16931764 DOI: 10.1126/Science.1128813  0.92
2005 Lee JY, Baum SF, Alvarez J, Patel A, Chitwood DH, Bowman JL. Activation of CRABS CLAW in the Nectaries and Carpels of Arabidopsis. The Plant Cell. 17: 25-36. PMID 15598802 DOI: 10.1105/Tpc.104.026666  0.92
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