| Year |
Citation |
Score |
| 2023 |
Nagarajan VK, Stuart CJ, DiBattista AT, Accerbi M, Caplan JL, Green PJ. RNA degradome analysis reveals DNE1 endoribonuclease is required for the turnover of diverse mRNA substrates in Arabidopsis. The Plant Cell. PMID 37070465 DOI: 10.1093/plcell/koad085 |
0.376 |
|
| 2021 |
Smita S, Robben M, Deuja A, Accerbi M, Green PJ, Subramanian S, Fennell A. Integrative Analysis of Gene Expression and miRNAs Reveal Biological Pathways Associated with Bud Paradormancy and Endodormancy in Grapevine. Plants (Basel, Switzerland). 10. PMID 33807184 DOI: 10.3390/plants10040669 |
0.31 |
|
| 2019 |
Nagarajan VK, Kukulich PM, von Hagel B, Green PJ. RNA degradomes reveal substrates and importance for dark and nitrogen stress responses of Arabidopsis XRN4. Nucleic Acids Research. PMID 31428786 DOI: 10.1093/Nar/Gkz712 |
0.447 |
|
| 2018 |
Fereshteh Z, Schmidt SA, Al-Dossary AA, Accerbi M, Arighi C, Cowart J, Song JL, Green PJ, Choi K, Yoo S, Martin-DeLeon PA. Murine Oviductosomes (OVS) microRNA profiling during the estrous cycle: Delivery of OVS-borne microRNAs to sperm where miR-34c-5p localizes at the centrosome. Scientific Reports. 8: 16094. PMID 30382141 DOI: 10.1038/S41598-018-34409-4 |
0.321 |
|
| 2018 |
Franke KR, Schmidt SA, Park S, Jeong DH, Accerbi M, Green PJ. Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops. Bmc Genomics. 19: 547. PMID 30029591 DOI: 10.1186/S12864-018-4911-7 |
0.349 |
|
| 2016 |
Battelle BA, Ryan JF, Kempler KE, Saraf SR, Marten CE, Warren WC, Minx P, Montague MJ, Green PJ, Schmidt SA, Fulton L, Patel NH, Protas ME, Wilson RK, Porter ML. Opsin repertoire and expression patterns in horseshoe crabs: evidence from the genome of Limulus polyphemus (Arthropoda: Chelicerata). Genome Biology and Evolution. PMID 27189985 DOI: 10.1093/Gbe/Evw100 |
0.366 |
|
| 2016 |
Olsen JL, Rouzé P, Verhelst B, Lin YC, Bayer T, Collen J, Dattolo E, De Paoli E, Dittami S, Maumus F, Michel G, Kersting A, Lauritano C, Lohaus R, Töpel M, ... ... Green PJ, et al. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea. Nature. PMID 26814964 DOI: 10.1038/Nature16548 |
0.415 |
|
| 2015 |
Merret R, Nagarajan VK, Carpentier MC, Park S, Favory JJ, Descombin J, Picart C, Charng YY, Green PJ, Deragon JM, Bousquet-Antonelli C. Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana. Nucleic Acids Research. 43: 4121-32. PMID 25845591 DOI: 10.1093/Nar/Gkv234 |
0.378 |
|
| 2015 |
Suzuki Y, Arae T, Green PJ, Yamaguchi J, Chiba Y. AtCCR4a and AtCCR4b are Involved in Determining the Poly(A) Length of Granule-bound starch synthase 1 Transcript and Modulating Sucrose and Starch Metabolism in Arabidopsis thaliana. Plant & Cell Physiology. 56: 863-74. PMID 25630334 DOI: 10.1093/Pcp/Pcv012 |
0.443 |
|
| 2015 |
Schmidt SA, Foley PL, Jeong DH, Rymarquis LA, Doyle F, Tenenbaum SA, Belasco JG, Green PJ. Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells. Nucleic Acids Research. 43: 309-23. PMID 25429978 DOI: 10.1093/Nar/Gku1258 |
0.37 |
|
| 2015 |
Thatcher SR, Burd S, Wright C, Lers A, Green PJ. Differential expression of miRNAs and their target genes in senescing leaves and siliques: insights from deep sequencing of small RNAs and cleaved target RNAs. Plant, Cell & Environment. 38: 188-200. PMID 24965556 DOI: 10.1111/Pce.12393 |
0.442 |
|
| 2014 |
Chávez Montes RA, de Fátima Rosas-Cárdenas F, De Paoli E, Accerbi M, Rymarquis LA, Mahalingam G, Marsch-Martínez N, Meyers BC, Green PJ, de Folter S. Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs. Nature Communications. 5: 3722. PMID 24759728 DOI: 10.1038/Ncomms4722 |
0.457 |
|
| 2013 |
Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ. Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon. Genome Biology. 14: R145. PMID 24367943 DOI: 10.1186/Gb-2013-14-12-R145 |
0.39 |
|
| 2013 |
Jeong DH, Thatcher SR, Brown RS, Zhai J, Park S, Rymarquis LA, Meyers BC, Green PJ. Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage. Plant Physiology. 162: 1225-45. PMID 23709668 DOI: 10.1104/Pp.113.219873 |
0.411 |
|
| 2013 |
Nagarajan VK, Jones CI, Newbury SF, Green PJ. XRN 5'→3' exoribonucleases: structure, mechanisms and functions. Biochimica Et Biophysica Acta. 1829: 590-603. PMID 23517755 DOI: 10.1016/J.Bbagrm.2013.03.005 |
0.414 |
|
| 2013 |
Jeong D, Green PJ. The role of rice microRNAs in abiotic stress responses Journal of Plant Biology. 56: 187-197. DOI: 10.1007/S12374-013-0213-4 |
0.364 |
|
| 2012 |
Stiller JW, Perry J, Rymarquis LA, Accerbi M, Green PJ, Prochnik S, Lindquist E, Chan CX, Yarish C, Lin S, Zhuang Y, Blouin NA, Brawley SH. MAJOR DEVELOPMENTAL REGULATORS AND THEIR EXPRESSION IN TWO CLOSELY RELATED SPECIES OF PORPHYRA (RHODOPHYTA)(1). Journal of Phycology. 48: 883-96. PMID 27008999 DOI: 10.1111/J.1529-8817.2012.01138.X |
0.462 |
|
| 2012 |
Jeong DH, Green PJ. Methods for validation of miRNA sequence variants and the cleavage of their targets. Methods (San Diego, Calif.). 58: 135-43. PMID 22922269 DOI: 10.1016/J.Ymeth.2012.08.005 |
0.329 |
|
| 2012 |
Song X, Li P, Zhai J, Zhou M, Ma L, Liu B, Jeong DH, Nakano M, Cao S, Liu C, Chu C, Wang XJ, Green PJ, Meyers BC, Cao X. Roles of DCL4 and DCL3b in rice phased small RNA biogenesis. The Plant Journal : For Cell and Molecular Biology. 69: 462-74. PMID 21973320 DOI: 10.1111/J.1365-313X.2011.04805.X |
0.398 |
|
| 2011 |
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ. Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage. The Plant Cell. 23: 4185-207. PMID 22158467 DOI: 10.1105/Tpc.111.089045 |
0.43 |
|
| 2011 |
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, González AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, et al. MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. Genes & Development. 25: 2540-53. PMID 22156213 DOI: 10.1101/Gad.177527.111 |
0.452 |
|
| 2011 |
Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, ... ... Green PJ, et al. The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature. 480: 520-4. PMID 22089132 DOI: 10.1038/Nature10625 |
0.341 |
|
| 2011 |
Waidner LA, Burnside J, Anderson AS, Bernberg EL, German MA, Meyers BC, Green PJ, Morgan RW. A microRNA of infectious laryngotracheitis virus can downregulate and direct cleavage of ICP4 mRNA. Virology. 411: 25-31. PMID 21232778 DOI: 10.1016/J.Virol.2010.12.023 |
0.358 |
|
| 2011 |
Rymarquis LA, Souret FF, Green PJ. Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories. Rna (New York, N.Y.). 17: 501-11. PMID 21224377 DOI: 10.1261/Rna.2467911 |
0.481 |
|
| 2011 |
Green P. 2008 Benjamin franklin medal in life science is presented to victor ambros, Ph.D. (University of Massachusetts Medical School, Worcester, Massachusetts), gary ruvkun, Ph.D. (Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts) and david baulcombe, Ph.D., FRS (University of Cambridge, Cambridge, UK) Journal of the Franklin Institute. 348: 500-505. DOI: 10.1016/J.Jfranklin.2010.05.004 |
0.412 |
|
| 2010 |
Arteaga-Vazquez M, Sidorenko L, Rabanal FA, Shrivistava R, Nobuta K, Green PJ, Meyers BC, Chandler VL. RNA-mediated trans-communication can establish paramutation at the b1 locus in maize. Proceedings of the National Academy of Sciences of the United States of America. 107: 12986-91. PMID 20616013 DOI: 10.1073/Pnas.1007972107 |
0.469 |
|
| 2010 |
Zakrzewska-Placzek M, Souret FF, Sobczyk GJ, Green PJ, Kufel J. Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA. Nucleic Acids Research. 38: 4487-502. PMID 20338880 DOI: 10.1093/nar/gkq172 |
0.305 |
|
| 2010 |
Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, Barry K, Lucas S, Harmon-Smith M, Lail K, Tice H, Grimwood J, McKenzie N, Huo N, Gu YQ, ... ... Green PJ, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon Nature. 463: 763-768. PMID 20148030 DOI: 10.1038/Nature08747 |
0.313 |
|
| 2010 |
Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA. Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 107: 4477-82. PMID 20142497 DOI: 10.1073/Pnas.0909571107 |
0.725 |
|
| 2010 |
Ibrahim F, Rymarquis LA, Kim EJ, Becker J, Balassa E, Green PJ, Cerutti H. Uridylation of mature miRNAs and siRNAs by the MUT68 nucleotidyltransferase promotes their degradation in Chlamydomonas. Proceedings of the National Academy of Sciences of the United States of America. 107: 3906-11. PMID 20142471 DOI: 10.1073/Pnas.0912632107 |
0.411 |
|
| 2010 |
Swaminathan K, Alabady MS, Varala K, De Paoli E, Ho I, Rokhsar DS, Arumuganathan AK, Ming R, Green PJ, Meyers BC, Moose SP, Hudson ME. Genomic and small RNA sequencing of Miscanthus x giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses. Genome Biology. 11: R12. PMID 20128909 DOI: 10.1186/Gb-2010-11-2-R12 |
0.325 |
|
| 2010 |
Jeong DH, German MA, Rymarquis LA, Thatcher SR, Green PJ. Abiotic stress-associated miRNAs: detection and functional analysis. Methods in Molecular Biology (Clifton, N.J.). 592: 203-30. PMID 19802598 DOI: 10.1007/978-1-60327-005-2_14 |
0.383 |
|
| 2010 |
Accerbi M, Schmidt SA, De Paoli E, Park S, Jeong DH, Green PJ. Methods for isolation of total RNA to recover miRNAs and other small RNAs from diverse species. Methods in Molecular Biology (Clifton, N.J.). 592: 31-50. PMID 19802587 DOI: 10.1007/978-1-60327-005-2_3 |
0.362 |
|
| 2009 |
Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, ... ... Green PJ, et al. Detailed analysis of a contiguous 22-Mb region of the maize genome. Plos Genetics. 5: e1000728. PMID 19936048 DOI: 10.1371/Journal.Pgen.1000728 |
0.416 |
|
| 2009 |
Cole C, Sobala A, Lu C, Thatcher SR, Bowman A, Brown JW, Green PJ, Barton GJ, Hutvagner G. Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs. Rna (New York, N.Y.). 15: 2147-60. PMID 19850906 DOI: 10.1261/Rna.1738409 |
0.363 |
|
| 2009 |
De Paoli E, Dorantes-Acosta A, Zhai J, Accerbi M, Jeong DH, Park S, Meyers BC, Jorgensen RA, Green PJ. Distinct extremely abundant siRNAs associated with cosuppression in petunia. Rna (New York, N.Y.). 15: 1965-70. PMID 19776157 DOI: 10.1261/Rna.1706109 |
0.421 |
|
| 2009 |
Haas BJ, Kamoun S, Zody MC, Jiang RH, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T, Bozkurt TO, Ah-Fong AM, Alvarado L, Anderson VL, Armstrong MR, ... ... Green PJ, et al. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461: 393-8. PMID 19741609 DOI: 10.1038/Nature08358 |
0.373 |
|
| 2009 |
Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J. MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific. Virology. 388: 128-36. PMID 19328516 DOI: 10.1016/J.Virol.2009.02.043 |
0.371 |
|
| 2009 |
German MA, Luo S, Schroth G, Meyers BC, Green PJ. Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome. Nature Protocols. 4: 356-62. PMID 19247285 DOI: 10.1038/Nprot.2009.8 |
0.391 |
|
| 2009 |
Chiba Y, Green PJ. mRNA Degradation Machinery in Plants Journal of Plant Biology. 52: 114-124. DOI: 10.1007/S12374-009-9021-2 |
0.449 |
|
| 2008 |
Meyers BC, Axtell MJ, Bartel B, Bartel DP, Baulcombe D, Bowman JL, Cao X, Carrington JC, Chen X, Green PJ, Griffiths-Jones S, Jacobsen SE, Mallory AC, Martienssen RA, Poethig RS, et al. Criteria for annotation of plant MicroRNAs. The Plant Cell. 20: 3186-90. PMID 19074682 DOI: 10.1105/Tpc.108.064311 |
0.429 |
|
| 2008 |
Morgan R, Anderson A, Bernberg E, Kamboj S, Huang E, Lagasse G, Isaacs G, Parcells M, Meyers BC, Green PJ, Burnside J. Sequence conservation and differential expression of Marek's disease virus microRNAs. Journal of Virology. 82: 12213-20. PMID 18842708 DOI: 10.1128/Jvi.01722-08 |
0.341 |
|
| 2008 |
Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, Accerbi M, Arteaga-Vazquez M, Sidorenko L, Jeong DH, Yen Y, Green PJ, Chandler VL, Meyers BC. Distinct size distribution of endogeneous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant. Proceedings of the National Academy of Sciences of the United States of America. 105: 14958-63. PMID 18815367 DOI: 10.1073/Pnas.0808066105 |
0.468 |
|
| 2008 |
Meyers BC, Green PJ, Lu C. miRNAs in the Plant Genome: All Things Great and Small. Genome Dynamics. 4: 108-18. PMID 18756081 DOI: 10.1159/000126010 |
0.354 |
|
| 2008 |
Thompson DM, Lu C, Green PJ, Parker R. tRNA cleavage is a conserved response to oxidative stress in eukaryotes. Rna (New York, N.Y.). 14: 2095-103. PMID 18719243 DOI: 10.1261/Rna.1232808 |
0.333 |
|
| 2008 |
Hillwig MS, Lebrasseur ND, Green PJ, Macintosh GC. Impact of transcriptional, ABA-dependent, and ABA-independent pathways on wounding regulation of RNS1 expression. Molecular Genetics and Genomics : Mgg. 280: 249-61. PMID 18607631 DOI: 10.1007/S00438-008-0360-3 |
0.386 |
|
| 2008 |
German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ. Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends. Nature Biotechnology. 26: 941-6. PMID 18542052 DOI: 10.1038/Nbt1417 |
0.362 |
|
| 2008 |
Rymarquis LA, Kastenmayer JP, Hüttenhofer AG, Green PJ. Diamonds in the rough: mRNA-like non-coding RNAs. Trends in Plant Science. 13: 329-34. PMID 18448381 DOI: 10.1016/J.Tplants.2008.02.009 |
0.451 |
|
| 2008 |
Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW. Deep sequencing of chicken microRNAs. Bmc Genomics. 9: 185. PMID 18430245 DOI: 10.1186/1471-2164-9-185 |
0.394 |
|
| 2008 |
Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ. Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs). Proceedings of the National Academy of Sciences of the United States of America. 105: 4951-6. PMID 18353984 DOI: 10.1073/Pnas.0708743105 |
0.348 |
|
| 2008 |
Tanaka T, Antonio BA, Kikuchi S, Matsumoto T, Nagamura Y, Numa H, Sakai H, Wu J, Itoh T, Sasaki T, Aono R, Fujii Y, Habara T, Harada E, ... ... Green PJ, et al. The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Research. 36: D1028-33. PMID 18089549 DOI: 10.1093/Nar/Gkm978 |
0.38 |
|
| 2007 |
Wachter A, Tunc-Ozdemir M, Grove BC, Green PJ, Shintani DK, Breaker RR. Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs. The Plant Cell. 19: 3437-50. PMID 17993623 DOI: 10.1105/Tpc.107.053645 |
0.505 |
|
| 2007 |
Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK, Maréchal-Drouard L, Marshall WF, Qu LH, Nelson DR, Sanderfoot AA, Spalding MH, ... ... Green P, et al. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science (New York, N.Y.). 318: 245-50. PMID 17932292 DOI: 10.1126/Science.1143609 |
0.693 |
|
| 2007 |
Lu C, Meyers BC, Green PJ. Construction of small RNA cDNA libraries for deep sequencing. Methods (San Diego, Calif.). 43: 110-7. PMID 17889797 DOI: 10.1016/J.Ymeth.2007.05.002 |
0.472 |
|
| 2007 |
Zhang X, Henderson IR, Lu C, Green PJ, Jacobsen SE. Role of RNA polymerase IV in plant small RNA metabolism. Proceedings of the National Academy of Sciences of the United States of America. 104: 4536-41. PMID 17360559 DOI: 10.1073/Pnas.0611456104 |
0.459 |
|
| 2007 |
Nobuta K, Venu RC, Lu C, Beló A, Vemaraju K, Kulkarni K, Wang W, Pillay M, Green PJ, Wang GL, Meyers BC. An expression atlas of rice mRNAs and small RNAs. Nature Biotechnology. 25: 473-7. PMID 17351617 DOI: 10.1038/Nbt1291 |
0.485 |
|
| 2006 |
Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC. MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant. Genome Research. 16: 1276-88. PMID 16954541 DOI: 10.1101/Gr.5530106 |
0.381 |
|
| 2006 |
Lers A, Sonego L, Green PJ, Burd S. Suppression of LX ribonuclease in tomato results in a delay of leaf senescence and abscission. Plant Physiology. 142: 710-21. PMID 16920876 DOI: 10.1104/Pp.106.080135 |
0.443 |
|
| 2006 |
Burnside J, Bernberg E, Anderson A, Lu C, Meyers BC, Green PJ, Jain N, Isaacs G, Morgan RW. Marek's disease virus encodes MicroRNAs that map to meq and the latency-associated transcript. Journal of Virology. 80: 8778-86. PMID 16912324 DOI: 10.1128/Jvi.00831-06 |
0.401 |
|
| 2006 |
Yan H, Ito H, Nobuta K, Ouyang S, Jin W, Tian S, Lu C, Venu RC, Wang GL, Green PJ, Wing RA, Buell CR, Meyers BC, Jiang J. Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere. The Plant Cell. 18: 2123-33. PMID 16877494 DOI: 10.1105/Tpc.106.043794 |
0.39 |
|
| 2006 |
Henderson IR, Zhang X, Lu C, Johnson L, Meyers BC, Green PJ, Jacobsen SE. Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning. Nature Genetics. 38: 721-5. PMID 16699516 DOI: 10.1038/Ng1804 |
0.426 |
|
| 2006 |
Meyers BC, Souret FF, Lu C, Green PJ. Sweating the small stuff: microRNA discovery in plants. Current Opinion in Biotechnology. 17: 139-46. PMID 16460926 DOI: 10.1016/J.Copbio.2006.01.008 |
0.417 |
|
| 2005 |
Lu C, Tej SS, Luo S, Haudenschild CD, Meyers BC, Green PJ. Elucidation of the small RNA component of the transcriptome. Science (New York, N.Y.). 309: 1567-9. PMID 16141074 DOI: 10.1126/Science.1114112 |
0.432 |
|
| 2005 |
Lidder P, Gutiérrez RA, Salomé PA, McClung CR, Green PJ. Circadian control of messenger RNA stability. Association with a sequence-specific messenger RNA decay pathway. Plant Physiology. 138: 2374-85. PMID 16055688 DOI: 10.1104/Pp.105.060368 |
0.463 |
|
| 2004 |
Gutiérrez RA, Green PJ, Keegstra K, Ohlrogge JB. Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms? Genome Biology. 5: R53. PMID 15287975 DOI: 10.1186/Gb-2004-5-8-R53 |
0.654 |
|
| 2004 |
Lidder P, Johnson MA, Sullivan ML, Thompson DM, Pérez-Amador MA, Howard CJ, Green PJ. Genetics of the DST-mediated mRNA decay pathway using a transgene-based selection. Biochemical Society Transactions. 32: 575-7. PMID 15270679 DOI: 10.1042/Bst0320575 |
0.439 |
|
| 2004 |
Souret FF, Kastenmayer JP, Green PJ. AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets. Molecular Cell. 15: 173-83. PMID 15260969 DOI: 10.1016/J.Molcel.2004.06.006 |
0.388 |
|
| 2004 |
Chiba Y, Johnson MA, Lidder P, Vogel JT, van Erp H, Green PJ. AtPARN is an essential poly(A) ribonuclease in Arabidopsis. Gene. 328: 95-102. PMID 15019988 DOI: 10.1016/J.Gene.2003.11.028 |
0.537 |
|
| 2003 |
Brown JW, Echeverria M, Qu LH, Lowe TM, Bachellerie JP, Hüttenhofer A, Kastenmayer JP, Green PJ, Shaw P, Marshall DF. Plant snoRNA database. Nucleic Acids Research. 31: 432-5. PMID 12520043 DOI: 10.1093/Nar/Gkg009 |
0.493 |
|
| 2002 |
Marker C, Zemann A, Terhörst T, Kiefmann M, Kastenmayer JP, Green P, Bachellerie JP, Brosius J, Hüttenhofer A. Experimental RNomics: identification of 140 candidates for small non-messenger RNAs in the plant Arabidopsis thaliana. Current Biology : Cb. 12: 2002-13. PMID 12477388 DOI: 10.1016/S0960-9822(02)01304-0 |
0.398 |
|
| 2002 |
Perez-Amador MA, Leon J, Green PJ, Carbonell J. Induction of the arginine decarboxylase ADC2 gene provides evidence for the involvement of polyamines in the wound response in Arabidopsis. Plant Physiology. 130: 1454-63. PMID 12428010 DOI: 10.1104/Pp.009951 |
0.444 |
|
| 2002 |
Gutierrez RA, Ewing RM, Cherry JM, Green PJ. Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes. Proceedings of the National Academy of Sciences of the United States of America. 99: 11513-8. PMID 12167669 DOI: 10.1073/Pnas.152204099 |
0.706 |
|
| 2002 |
Feldbrügge M, Arizti P, Sullivan ML, Zamore PD, Belasco JG, Green PJ. Comparative analysis of the plant mRNA-destabilizing element, DST, in mammalian and tobacco cells. Plant Molecular Biology. 49: 215-23. PMID 11999376 DOI: 10.1023/A:1014936824187 |
0.34 |
|
| 2001 |
Pérez-Amador MA, Lidder P, Johnson MA, Landgraf J, Wisman E, Green PJ. New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis. The Plant Cell. 13: 2703-17. PMID 11752382 DOI: 10.1105/tpc.010295 |
0.374 |
|
| 2001 |
MacIntosh GC, Wilkerson C, Green PJ. Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs Plant Physiology. 127: 765-776. PMID 11706161 DOI: 10.1104/Pp.127.3.765 |
0.444 |
|
| 2001 |
Kastenmayer JP, Johnson MA, Green PJ. Analysis of XRN orthologs by complementation of yeast mutants and localization of XRN-GFP fusion proteins. Methods in Enzymology. 342: 269-82. PMID 11586899 DOI: 10.1016/S0076-6879(01)42551-1 |
0.35 |
|
| 2001 |
MacIntosh GC, Bariola PA, Newbigin E, Green PJ. Characterization of Rny1, the Saccharomyces cerevisiae member of the T2 RNase family of RNases: Unexpected functions for ancient enzymes? Proceedings of the National Academy of Sciences of the United States of America. 98: 1018-1023. PMID 11158587 DOI: 10.1073/Pnas.98.3.1018 |
0.34 |
|
| 2000 |
Kastenmayer JP, Green PJ. Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm. Proceedings of the National Academy of Sciences of the United States of America. 97: 13985-90. PMID 11106401 DOI: 10.1073/pnas.97.25.13985 |
0.372 |
|
| 2000 |
Johnson MA, Perez-Amador MA, Lidder P, Green PJ. Mutants of Arabidopsis defective in a sequence-specific mRNA degradation pathway. Proceedings of the National Academy of Sciences of the United States of America. 97: 13991-6. PMID 11087822 DOI: 10.1073/Pnas.240354097 |
0.446 |
|
| 2000 |
Pérez-Amador MA, Abler ML, De Rocher EJ, Thompson DM, van Hoof A, LeBrasseur ND, Lers A, Green PJ. Identification of BFN1, a bifunctional nuclease induced during leaf and stem senescence in Arabidopsis. Plant Physiology. 122: 169-80. PMID 10631260 |
0.354 |
|
| 1999 |
Gutiérrez RA, MacIntosh GC, Green PJ. Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control. Trends in Plant Science. 4: 429-438. PMID 10529824 DOI: 10.1016/S1360-1385(99)01484-3 |
0.395 |
|
| 1999 |
Bariola PA, MacIntosh GC, Green PJ. Regulation of S-like ribonuclease levels in Arabidopsis. Antisense inhibition of RNS1 or RNS2 elevates anthocyanin accumulation Plant Physiology. 119: 331-342. PMID 9880376 DOI: 10.1104/Pp.119.1.331 |
0.437 |
|
| 1998 |
De Rocher EJ, Vargo-Gogola TC, Diehn SH, Green PJ. Direct evidence for rapid degradation of Bacillus thuringiensis toxin mRNA as a cause of poor expression in plants. Plant Physiology. 117: 1445-61. PMID 9701600 |
0.445 |
|
| 1998 |
Diehn SH, Chiu WL, De Rocher EJ, Green PJ. Premature polyadenylation at multiple sites within a Bacillus thuringiensis toxin gene-coding region. Plant Physiology. 117: 1433-43. PMID 9701599 DOI: 10.1104/Pp.117.4.1433 |
0.47 |
|
| 1998 |
Lers A, Khalchitski A, Lomaniec E, Burd S, Green PJ. Senescence-induced RNases in tomato. Plant Molecular Biology. 36: 439-49. PMID 9484484 DOI: 10.1023/A:1005993024161 |
0.383 |
|
| 1997 |
van Hoof A, Green PJ. Rare codons are not sufficient to destabilize a reporter gene transcript in tobacco. Plant Molecular Biology. 35: 383-7. PMID 9349262 DOI: 10.1023/A:1005849622840 |
0.366 |
|
| 1997 |
Gil P, Green PJ. Regulatory activity exerted by the SAUR-AC1 promoter region in transgenic plants. Plant Molecular Biology. 34: 803-8. PMID 9278170 DOI: 10.1023/a:1005875300606 |
0.38 |
|
| 1996 |
van Hoof A, Green PJ. Premature nonsense codons decrease the stability of phytohemagglutinin mRNA in a position-dependent manner. The Plant Journal : For Cell and Molecular Biology. 10: 415-24. PMID 8811857 DOI: 10.1046/j.1365-313x.1996.10030415.x |
0.383 |
|
| 1996 |
Gil P, Green PJ. Multiple regions of the Arabidopsis SAUR-AC1 gene control transcript abundance: the 3' untranslated region functions as an mRNA instability determinant. The Embo Journal. 15: 1678-86. PMID 8612592 |
0.368 |
|
| 1995 |
Taylor CB, Green PJ. Identification and characterization of genes with unstable transcripts (GUTs) in tobacco Plant Molecular Biology. 28: 27-38. PMID 7787185 DOI: 10.1007/Bf00042035 |
0.748 |
|
| 1995 |
Chrispeels MJ, Green PJ, Nasrallah JB. Plant Cell Biology Comes of Age The Plant Cell. 7: 237-248. DOI: 10.1105/Tpc.7.3.237 |
0.325 |
|
| 1994 |
Gil P, Liu Y, Orbović V, Verkamp E, Poff KL, Green PJ. Characterization of the auxin-inducible SAUR-AC1 gene for use as a molecular genetic tool in Arabidopsis. Plant Physiology. 104: 777-84. PMID 8159792 DOI: 10.1104/Pp.104.2.777 |
0.428 |
|
| 1994 |
Bariola PA, Howard CJ, Taylor CB, Verburg MT, Jaglan VD, Green PJ. The Arabidopsis ribonuclease gene RNS1 is tightly controlled in response to phosphate limitation. The Plant Journal : For Cell and Molecular Biology. 6: 673-85. PMID 8000425 DOI: 10.1046/J.1365-313X.1994.6050673.X |
0.724 |
|
| 1993 |
Taylor CB, Bariola PA, delCardayré SB, Raines RT, Green PJ. RNS2: a senescence-associated RNase of Arabidopsis that diverged from the S-RNases before speciation. Proceedings of the National Academy of Sciences of the United States of America. 90: 5118-22. PMID 8506358 DOI: 10.1073/Pnas.90.11.5118 |
0.713 |
|
| 1993 |
Newman TC, Ohme-Takagi M, Taylor CB, Green PJ. DST sequences, highly conserved among plant SAUR genes, target reporter transcripts for rapid decay in tobacco. The Plant Cell. 5: 701-14. PMID 8329900 DOI: 10.1105/Tpc.5.6.701 |
0.754 |
|
| 1993 |
Sullivan ML, Green PJ. Post-transcriptional regulation of nuclear-encoded genes in higher plants: the roles of mRNA stability and translation. Plant Molecular Biology. 23: 1091-104. PMID 8292775 |
0.403 |
|
| 1993 |
Ohme-Takagi M, Taylor CB, Newman TC, Green PJ. The effect of sequences with high AU content on mRNA stability in tobacco. Proceedings of the National Academy of Sciences of the United States of America. 90: 11811-5. PMID 8265631 DOI: 10.1073/Pnas.90.24.11811 |
0.745 |
|
| 1992 |
Coleman J, Green PJ, Inouye M. The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes. 1984. Biotechnology (Reading, Mass.). 24: 253-60. PMID 1422021 |
0.338 |
|
| 1991 |
Taylor CB, Green PJ. Genes with Homology to Fungal and S-Gene RNases Are Expressed in Arabidopsis thaliana. Plant Physiology. 96: 980-4. PMID 16668284 DOI: 10.1104/Pp.96.3.980 |
0.748 |
|
| 1989 |
Lam E, Green PJ, Wong M, Chua NH. Phytochrome activation of two nuclear genes requires cytoplasmic protein synthesis. The Embo Journal. 8: 2777-83. PMID 2583082 DOI: 10.1002/J.1460-2075.1989.Tb08423.X |
0.674 |
|
| 1988 |
Kuhlemeier C, Cuozzo M, Green PJ, Goyvaerts E, Ward K, Chua NH. Localization and conditional redundancy of regulatory elements in rbcS-3A, a pea gene encoding the small subunit of ribulose-bisphosphate carboxylase. Proceedings of the National Academy of Sciences of the United States of America. 85: 4662-6. PMID 3387433 DOI: 10.1073/Pnas.85.13.4662 |
0.734 |
|
| 1988 |
Green PJ, Yong MH, Cuozzo M, Kano-Murakami Y, Silverstein P, Chua NH. Binding site requirements for pea nuclear protein factor GT-1 correlate with sequences required for light-dependent transcriptional activation of the rbcS-3A gene. The Embo Journal. 7: 4035-44. PMID 3243271 DOI: 10.1002/J.1460-2075.1988.Tb03297.X |
0.552 |
|
| 1987 |
Green PJ, Kay SA, Chua NH. Sequence-specific interactions of a pea nuclear factor with light-responsive elements upstream of the rbcS-3A gene. The Embo Journal. 6: 2543-9. PMID 3678200 DOI: 10.1002/J.1460-2075.1987.Tb02542.X |
0.656 |
|
| 1987 |
Kuhlemeier C, Fluhr R, Green PJ, Chua NH. Sequences in the pea rbcS-3A gene have homology to constitutive mammalian enhancers but function as negative regulatory elements. Genes & Development. 1: 247-55. PMID 2890552 DOI: 10.1101/Gad.1.3.247 |
0.735 |
|
| 1987 |
Andersen J, Delihas N, Ikenaka K, Green PJ, Pines O, Ilercil O, Inouye M. The isolation and characterization of RNA coded by the micF gene in Escherichia coli. Nucleic Acids Research. 15: 2089-101. PMID 2436145 DOI: 10.1093/Nar/15.5.2089 |
0.499 |
|
| 1987 |
Kuhlemeier C, Green PJ, Chua NH. Regulation of Gene Expression in Higher Plants Annual Review of Plant Physiology. 38: 221-257. DOI: 10.1146/Annurev.Pp.38.060187.001253 |
0.733 |
|
| 1986 |
Green PJ, Pines O, Inouye M. The role of antisense RNA in gene regulation. Annual Review of Biochemistry. 55: 569-97. PMID 2427015 DOI: 10.1146/Annurev.Bi.55.070186.003033 |
0.543 |
|
| 1986 |
Nagy F, Fluhr R, Kuhlemeier C, Kay S, Boutry M, Green P, Poulsen C, Chua NH. Cis-Acting Elements for Selective Expression of Two Photosynthetic Genes in Transgenic Plants Philosophical Transactions of the Royal Society B. 314: 493-500. DOI: 10.1098/Rstb.1986.0068 |
0.764 |
|
| 1985 |
Green PJ, Mitchell C, Inouye M. Effect of mic gene structure on repressor activity in the OmpA system. Biochimie. 67: 763-7. PMID 2417633 DOI: 10.1016/S0300-9084(85)80165-6 |
0.571 |
|
| 1985 |
Coleman J, Hirashima A, Inokuchi Y, Green PJ, Inouye M. A novel immune system against bacteriophage infection using complementary RNA (micRNA). Nature. 315: 601-3. PMID 2409446 DOI: 10.1038/315601A0 |
0.595 |
|
| 1984 |
Green PJ, Inouye M. Roles of the 5′ leader region of the ompA mRNA Journal of Molecular Biology. 176: 431-442. PMID 6205157 DOI: 10.1016/0022-2836(84)90499-6 |
0.521 |
|
| 1984 |
Coleman J, Green PJ, Inouye M. The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes. Cell. 37: 429-36. PMID 6202422 DOI: 10.1016/0092-8674(84)90373-8 |
0.574 |
|
| 1983 |
Green P, Inouye M. [5] In Vivo and in Vitro systems for studying bacterial membrane biogenesis Methods in Enzymology. 96: 74-84. DOI: 10.1016/S0076-6879(83)96009-3 |
0.435 |
|
| 1981 |
Movva RN, Green P, Nakamura K, Inouye M. Interaction of cAMP receptor protein with the ompA gene, a gene for a major outer membrane protein of Escherichia coli. Febs Letters. 128: 186-90. PMID 7021177 DOI: 10.1016/0014-5793(81)80077-4 |
0.58 |
|
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