Joanna C. Chiu, Ph.D. - Publications

Affiliations: 
2004 New York University, New York, NY, United States 
Area:
Plant Physiology, Molecular Biology, Genetics

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Li YH, Liu X, Vanselow JT, Zheng H, Schlosser A, Chiu JC. O-GlcNAcylation of PERIOD regulates its interaction with CLOCK and timing of circadian transcriptional repression. Plos Genetics. 15: e1007953. PMID 30703153 DOI: 10.1371/journal.pgen.1007953  0.36
2018 Lam VH, Li YH, Liu X, Murphy KA, Diehl JS, Kwok RS, Chiu JC. CK1α collaborates with DOUBLETIME to regulate PERIOD function in the circadian clock. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30373768 DOI: 10.1523/JNEUROSCI.0871-18.2018  0.36
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  0.48
2017 Battenberg K, Lee EK, Chiu JC, Berry AM, Potter D. OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement. Bmc Bioinformatics. 18: 310. PMID 28633662 DOI: 10.1186/s12859-017-1726-5  0.32
2016 Fu J, Murphy KA, Zhou M, Li YH, Lam VH, Tabuloc CA, Chiu JC, Liu Y. Codon usage affects the structure and function of the Drosophila circadian clock protein PERIOD. Genes & Development. 30: 1761-75. PMID 27542830 DOI: 10.1101/gad.281030.116  0.48
2016 Shearer PW, West JD, Walton VM, Brown PH, Svetec N, Chiu JC. Seasonal cues induce phenotypic plasticity of Drosophila suzukii to enhance winter survival. Bmc Ecology. 16: 11. PMID 27001084 DOI: 10.1186/s12898-016-0070-3  0.48
2016 Murphy KA, Tabuloc CA, Cervantes KR, Chiu JC. Ingestion of genetically modified yeast symbiont reduces fitness of an insect pest via RNA interference. Scientific Reports. 6: 22587. PMID 26931800 DOI: 10.1038/srep22587  0.48
2016 Kwok RS, Lam VH, Chiu JC. Understanding the role of chromatin remodeling in the regulation of circadian transcription in Drosophila. Fly. 0. PMID 26926115 DOI: 10.1080/19336934.2016.1143993  0.48
2015 Yildirim E, Chiu JC, Edery I. Identification of light-sensitive phosphorylation sites on PERIOD that regulate the pace of circadian rhythms in Drosophila. Molecular and Cellular Biology. PMID 26711257 DOI: 10.1128/MCB.00682-15  0.32
2015 Borowiec ML, Lee EK, Chiu JC, Plachetzki DC. Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa. Bmc Genomics. 16: 987. PMID 26596625 DOI: 10.1186/s12864-015-2146-4  0.48
2015 Kwok RS, Li YH, Lei AJ, Edery I, Chiu JC. The Catalytic and Non-catalytic Functions of the Brahma Chromatin-Remodeling Protein Collaborate to Fine-Tune Circadian Transcription in Drosophila. Plos Genetics. 11: e1005307. PMID 26132408 DOI: 10.1371/journal.pgen.1005307  0.48
2015 Svetec N, Zhao L, Saelao P, Chiu JC, Begun DJ. Evidence that natural selection maintains genetic variation for sleep in Drosophila melanogaster. Bmc Evolutionary Biology. 15: 41. PMID 25887180 DOI: 10.1186/s12862-015-0316-2  0.48
2015 Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, ... ... Chiu JC, et al. Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes. Science (New York, N.Y.). 347: 1258522. PMID 25554792 DOI: 10.1126/science.1258522  0.36
2014 Wiman NG, Walton VM, Dalton DT, Anfora G, Burrack HJ, Chiu JC, Daane KM, Grassi A, Miller B, Tochen S, Wang X, Ioriatti C. Integrating temperature-dependent life table data into a matrix projection model for Drosophila suzukii population estimation. Plos One. 9: e106909. PMID 25192013 DOI: 10.1371/journal.pone.0106909  0.48
2013 Chiu JC, Jiang X, Zhao L, Hamm CA, Cridland JM, Saelao P, Hamby KA, Lee EK, Kwok RS, Zhang G, Zalom FG, Walton VM, Begun DJ. Genome of Drosophila suzukii, the spotted wing drosophila. G3 (Bethesda, Md.). 3: 2257-71. PMID 24142924 DOI: 10.1534/g3.113.008185  0.48
2013 Johnson BR, Borowiec ML, Chiu JC, Lee EK, Atallah J, Ward PS. Phylogenomics resolves evolutionary relationships among ants, bees, and wasps. Current Biology : Cb. 23: 2058-62. PMID 24094856 DOI: 10.1016/j.cub.2013.08.050  0.48
2013 Hamby KA, Kwok RS, Zalom FG, Chiu JC. Integrating circadian activity and gene expression profiles to predict chronotoxicity of Drosophila suzukii response to insecticides. Plos One. 8: e68472. PMID 23861907 DOI: 10.1371/journal.pone.0068472  0.48
2013 Chiu JC, Kaub K, Zou S, Liedo P, Altamirano-Robles L, Ingram D, Carey JR. Deleterious effect of suboptimal diet on rest-activity cycle in Anastrepha ludens manifests itself with age. Scientific Reports. 3: 1773. PMID 23639915 DOI: 10.1038/srep01773  0.48
2011 Lee EK, Cibrian-Jaramillo A, Kolokotronis SO, Katari MS, Stamatakis A, Ott M, Chiu JC, Little DP, Stevenson DW, McCombie WR, Martienssen RA, Coruzzi G, Desalle R. A functional phylogenomic view of the seed plants. Plos Genetics. 7: e1002411. PMID 22194700 DOI: 10.1371/journal.pgen.1002411  0.48
2011 Chiu JC, Ko HW, Edery I. NEMO/NLK phosphorylates PERIOD to initiate a time-delay phosphorylation circuit that sets circadian clock speed. Cell. 145: 357-70. PMID 21514639 DOI: 10.1016/j.cell.2011.04.002  0.48
2010 Chiu JC, Low KH, Pike DH, Yildirim E, Edery I. Assaying locomotor activity to study circadian rhythms and sleep parameters in Drosophila. Journal of Visualized Experiments : Jove. PMID 20972399 DOI: 10.3791/2157  0.48
2009 Egan M, Lee EK, Chiu JC, Coruzzi G, Desalle R. Gene orthology assessment with OrthologID. Methods in Molecular Biology (Clifton, N.J.). 537: 23-38. PMID 19378138 DOI: 10.1007/978-1-59745-251-9_2  0.48
2008 Chiu JC, Vanselow JT, Kramer A, Edery I. The phospho-occupancy of an atypical SLIMB-binding site on PERIOD that is phosphorylated by DOUBLETIME controls the pace of the clock. Genes & Development. 22: 1758-72. PMID 18593878 DOI: 10.1101/gad.1682708  0.48
2006 Chiu JC, Lee EK, Egan MG, Sarkar IN, Coruzzi GM, DeSalle R. OrthologID: automation of genome-scale ortholog identification within a parsimony framework. Bioinformatics (Oxford, England). 22: 699-707. PMID 16410324 DOI: 10.1093/bioinformatics/btk040  0.48
2002 Chiu JC, Brenner ED, DeSalle R, Nitabach MN, Holmes TC, Coruzzi GM. Phylogenetic and expression analysis of the glutamate-receptor-like gene family in Arabidopsis thaliana. Molecular Biology and Evolution. 19: 1066-82. PMID 12082126  0.48
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