Thomas Brutnell - Publications

Donald Danforth Plant Science Center 

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, ... ... Brutnell TP, et al. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic Acids Research. PMID 37526283 DOI: 10.1093/nar/gkad616  0.596
2023 Liu Q, Teng S, Deng C, Wu S, Li H, Wang Y, Wu J, Cui X, Zhang Z, Quick WP, Brutnell TP, Sun X, Lu T. SHORT ROOT and INDETERMINATE DOMAIN family members govern PIN-FORMED expression to regulate minor vein differentiation in rice. The Plant Cell. PMID 37154077 DOI: 10.1093/plcell/koad125  0.345
2021 Lee DY, Hua L, Khoshravesh R, Giuliani R, Kumar I, Cousins A, Sage T, Hibberd JM, Brutnell TP. Engineering chloroplast development in rice through cell-specific control of endogenous genetic circuits. Plant Biotechnology Journal. PMID 34328250 DOI: 10.1111/pbi.13660  0.302
2021 Weissmann S, Huang P, Wiechert MA, Furuyama K, Brutnell TP, Taniguchi M, Schnable JC, Mockler TC. DCT4-A New Member of the Dicarboxylate Transporter Family in C4 Grasses. Genome Biology and Evolution. 13. PMID 33587128 DOI: 10.1093/gbe/evaa251  0.312
2020 Mamidi S, Healey A, Huang P, Grimwood J, Jenkins J, Barry K, Sreedasyam A, Shu S, Lovell JT, Feldman M, Wu J, Yu Y, Chen C, Johnson J, Sakakibara H, ... ... Brutnell TP, et al. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci. Nature Biotechnology. 38: 1203-1210. PMID 33020633 DOI: 10.1038/s41587-020-0681-2  0.33
2018 Jansson C, Vogel J, Hazen S, Brutnell T, Mockler T. Climate-smart crops with enhanced photosynthesis. Journal of Experimental Botany. 69: 3801-3809. PMID 30032188 DOI: 10.1093/Jxb/Ery213  0.469
2018 Kolbe AR, Brutnell TP, Cousins AB, Studer A. Carbonic anhydrase mutants in Zea mays have altered stomatal responses to environmental signals. Plant Physiology. PMID 29794168 DOI: 10.1104/pp.18.00176  0.678
2018 Zhang Y, Giuliani R, Zhang Y, Zhang Y, Araujo WL, Wang B, Liu P, Sun Q, Cousins A, Edwards G, Fernie A, Brutnell TP, Li P. Characterization of maize leaf Pyruvate Orthophosphate Dikinase using high throughput sequencing. Journal of Integrative Plant Biology. PMID 29664234 DOI: 10.1111/Jipb.12656  0.362
2017 Coelho CP, Huang P, Lee DY, Brutnell TP. Making Roots, Shoots, and Seeds: IDD Gene Family Diversification in Plants. Trends in Plant Science. PMID 29056440 DOI: 10.1016/J.Tplants.2017.09.008  0.33
2016 Huang P, Shyu C, Coelho CP, Cao Y, Brutnell TP. Setaria viridis as a Model System to Advance Millet Genetics and Genomics. Frontiers in Plant Science. 7: 1781. PMID 27965689 DOI: 10.3389/Fpls.2016.01781  0.572
2016 Studer AJ, Schnable JC, Weissmann S, Kolbe AR, McKain MR, Shao Y, Cousins AB, Kellogg EA, Brutnell TP. The draft genome of the C3 panicoid grass species Dichanthelium oligosanthes. Genome Biology. 17: 223. PMID 27793170 DOI: 10.1186/S13059-016-1080-3  0.669
2016 Ding Z, Zhang Y, Xiao Y, Liu F, Wang M, Zhu X, Liu P, Sun Q, Wang W, Peng M, Brutnell T, Li P. Transcriptome response of cassava leaves under natural shade. Scientific Reports. 6: 31673. PMID 27539510 DOI: 10.1038/Srep31673  0.353
2016 Huang P, Studer AJ, Schnable JC, Kellogg EA, Brutnell TP. Cross species selection scans identify components of C4 photosynthesis in the grasses. Journal of Experimental Botany. PMID 27436281 DOI: 10.1093/Jxb/Erw256  0.706
2016 Huang P, Brutnell TP. A synthesis of transcriptomic surveys to dissect the genetic basis of C4 photosynthesis. Current Opinion in Plant Biology. 31: 91-99. PMID 27078208 DOI: 10.1016/J.Pbi.2016.03.014  0.388
2015 Ding Z, Weissmann S, Wang M, Du B, Huang L, Wang L, Tu X, Zhong S, Myers C, Brutnell TP, Sun Q, Li P. Identification of Photosynthesis-Associated C4 Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C3 and C4 Species. Plos One. 10: e0140629. PMID 26465154 DOI: 10.1371/journal.pone.0140629  0.372
2015 Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, Hill ST, McEntee CJ, Warnasooriya SN, Kumar I, Ficor T, Turnipseed S, Gilbert KB, Brutnell TP, Carrington JC, et al. A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in Setaria. Molecular Plant. PMID 26099924 DOI: 10.1016/J.Molp.2015.06.005  0.588
2015 Zhang N, Gibon Y, Wallace JG, Lepak N, Li P, Dedow L, Chen C, So YS, Kremling K, Bradbury PJ, Brutnell T, Stitt M, Buckler ES. Genome-wide association of carbon and nitrogen metabolism in the maize nested association mapping population. Plant Physiology. 168: 575-83. PMID 25918116 DOI: 10.1104/Pp.15.00025  0.437
2015 Shyu C, Brutnell TP. Growth-defence balance in grass biomass production: the role of jasmonates. Journal of Experimental Botany. 66: 4165-76. PMID 25711704 DOI: 10.1093/Jxb/Erv011  0.601
2014 Wang L, Czedik-Eysenberg A, Mertz RA, Si Y, Tohge T, Nunes-Nesi A, Arrivault S, Dedow LK, Bryant DW, Zhou W, Xu J, Weissmann S, Studer A, Li P, Zhang C, ... ... Brutnell TP, et al. Comparative analyses of C₄ and C₃ photosynthesis in developing leaves of maize and rice. Nature Biotechnology. 32: 1158-65. PMID 25306245 DOI: 10.1038/Nbt.3019  0.699
2014 Studer AJ, Gandin A, Kolbe AR, Wang L, Cousins AB, Brutnell TP. A Limited Role for Carbonic Anhydrase in C4 Photosynthesis as Revealed by a ca1ca2 Double Mutant in Maize. Plant Physiology. 165: 608-617. PMID 24706552 DOI: 10.1104/pp.114.237602  0.698
2014 Mertz RA, Brutnell TP. Bundle sheath suberization in grass leaves: multiple barriers to characterization. Journal of Experimental Botany. 65: 3371-80. PMID 24659485 DOI: 10.1093/jxb/eru108  0.346
2014 Studer AJ, Gandin A, Kolbe AR, Wang L, Cousins AB, Brutnell TP. A limited role for carbonic anhydrase in C4 photosynthesis as revealed by a ca1ca2 double mutant in maize Plant Physiology. 165: 608-617. DOI: 10.1104/pp.114.237602  0.689
2013 Jiang H, Barbier H, Brutnell T. Methods for performing crosses in Setaria viridis, a new model system for the grasses. Journal of Visualized Experiments : Jove. PMID 24121645 DOI: 10.3791/50527  0.321
2013 Petti C, Shearer A, Tateno M, Ruwaya M, Nokes S, Brutnell T, Debolt S. Comparative feedstock analysis in Setaria viridis L. as a model for C4 bioenergy grasses and Panicoid crop species. Frontiers in Plant Science. 4: 181. PMID 23802002 DOI: 10.3389/Fpls.2013.00181  0.409
2012 Weissmann S, Brutnell TP. Engineering C4 photosynthetic regulatory networks. Current Opinion in Biotechnology. 23: 298-304. PMID 22261559 DOI: 10.1016/j.copbio.2011.12.018  0.371
2011 Goff SA, Vaughn M, McKay S, Lyons E, Stapleton AE, Gessler D, Matasci N, Wang L, Hanlon M, Lenards A, Muir A, Merchant N, Lowry S, Mock S, Helmke M, ... ... Brutnell T, et al. The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Frontiers in Plant Science. 2: 34. PMID 22645531 DOI: 10.3389/Fpls.2011.00034  0.313
2011 Brkljacic J, Grotewold E, Scholl R, Mockler T, Garvin DF, Vain P, Brutnell T, Sibout R, Bevan M, Budak H, Caicedo AL, Gao C, Gu Y, Hazen SP, Holt BF, et al. Brachypodium as a model for the grasses: today and the future. Plant Physiology. 157: 3-13. PMID 21771916 DOI: 10.1104/Pp.111.179531  0.37
2011 Wang L, Peterson RB, Brutnell TP. Regulatory mechanisms underlying C4 photosynthesis. The New Phytologist. 190: 9-20. PMID 21299565 DOI: 10.1111/j.1469-8137.2011.03649.x  0.356
2010 Brutnell TP, Wang L, Swartwood K, Goldschmidt A, Jackson D, Zhu XG, Kellogg E, Van Eck J. Setaria viridis: a model for C4 photosynthesis. The Plant Cell. 22: 2537-44. PMID 20693355 DOI: 10.1105/Tpc.110.075309  0.388
2009 Zelitch I, Schultes NP, Peterson RB, Brown P, Brutnell TP. High glycolate oxidase activity is required for survival of maize in normal air. Plant Physiology. 149: 195-204. PMID 18805949 DOI: 10.1104/Pp.108.128439  0.34
2007 Sheehan MJ, Kennedy LM, Costich DE, Brutnell TP. Subfunctionalization of PhyB1 and PhyB2 in the control of seedling and mature plant traits in maize. The Plant Journal : For Cell and Molecular Biology. 49: 338-53. PMID 17181778 DOI: 10.1111/j.1365-313X.2006.02962.x  0.3
2002 Brutnell TP. Transposon tagging in maize. Functional & Integrative Genomics. 2: 4-12. PMID 12021846 DOI: 10.1007/s10142-001-0044-0  0.328
1999 Brutnell T. Viruses making plants greener Trends in Genetics. 15: 96. PMID 10203804 DOI: 10.1016/S0168-9525(99)01722-9  0.338
1999 Brutnell T. Novel floral patterns Trends in Genetics. 15: 353. DOI: 10.1016/S0168-9525(99)01850-8  0.375
1996 Schultes NP, Brutnell TP, Allen A, Dellaporta SL, Nelson T, Chen J. Leaf permease1 gene of maize is required for chloroplast development. The Plant Cell. 8: 463-75. PMID 8721750 DOI: 10.1105/Tpc.8.3.463  0.373
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