Jan Lohmann - Publications

Affiliations: 
University of Heidelberg, Heidelberg, Baden-Württemberg, Germany 

69 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wu H, Qu X, Dong Z, Luo L, Shao C, Forner J, Lohmann JU, Su M, Xu M, Liu X, Zhu L, Zeng J, Liu S, Tian Z, Zhao Z. WUSCHEL triggers innate antiviral immunity in plant stem cells. Science (New York, N.Y.). 370: 227-231. PMID 33033220 DOI: 10.1126/science.abb7360  1
2020 Wolny A, Cerrone L, Vijayan A, Tofanelli R, Barro AV, Louveaux M, Wenzl C, Strauss S, Wilson-Sánchez D, Lymbouridou R, Steigleder S, Pape C, Bailoni A, Duran-Nebreda S, Bassel G, ... Lohmann JU, et al. Accurate and versatile 3D segmentation of plant tissues at cellular resolution. Elife. 9. PMID 32723478 DOI: 10.7554/eLife.57613  1
2020 Klawe FZ, Stiehl T, Bastian P, Gaillochet C, Lohmann JU, Marciniak-Czochra A. Mathematical modeling of plant cell fate transitions controlled by hormonal signals. Plos Computational Biology. 16: e1007523. PMID 32687508 DOI: 10.1371/journal.pcbi.1007523  1
2020 Galvan-Ampudia CS, Cerutti G, Legrand J, Brunoud G, Martin-Arevalillo R, Azais R, Bayle V, Moussu S, Wenzl C, Jaillais Y, Lohmann JU, Godin C, Vernoux T. Temporal integration of auxin information for the regulation of patterning. Elife. 9. PMID 32379043 DOI: 10.7554/eLife.55832  1
2020 Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nature Communications. 11: 2223. PMID 32376862 DOI: 10.1038/s41467-020-16024-y  1
2019 Ma Y, Miotk A, Šutiković Z, Ermakova O, Wenzl C, Medzihradszky A, Gaillochet C, Forner J, Utan G, Brackmann K, Galván-Ampudia CS, Vernoux T, Greb T, Lohmann JU. WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis. Nature Communications. 10: 5093. PMID 31704928 DOI: 10.1038/s41467-019-13074-9  1
2019 Weits DA, Kunkowska AB, Kamps NCW, Portz KMS, Packbier NK, Nemec Venza Z, Gaillochet C, Lohmann JU, Pedersen O, van Dongen JT, Licausi F. An apical hypoxic niche sets the pace of shoot meristem activity. Nature. PMID 31092919 DOI: 10.1038/s41586-019-1203-6  1
2019 López-Salmerón V, Schürholz AK, Li Z, Schlamp T, Wenzl C, Lohmann JU, Greb T, Wolf S. Inducible, Cell Type-Specific Expression in Arabidopsis thaliana Through LhGR-Mediated Trans-Activation. Journal of Visualized Experiments : Jove. PMID 31058906 DOI: 10.3791/59394  1
2019 Wolf S, Lohmann JU. Plant-thickening mechanisms revealed. Nature. 565: 433-435. PMID 30666055 DOI: 10.1038/d41586-018-07880-2  1
2018 Trost N, Rempel E, Ermakova O, Tamirisa S, Pârcălăbescu L, Boutros M, Lohmann JU, Lohmann I. WEADE: A workflow for enrichment analysis and data exploration. Plos One. 13: e0204016. PMID 30265728 DOI: 10.1371/journal.pone.0204016  1
2018 Tamirisa S, Papagiannouli F, Rempel E, Ermakova O, Trost N, Zhou J, Mundorf J, Brunel S, Ruhland N, Boutros M, Lohmann JU, Lohmann I. Decoding the Regulatory Logic of the Drosophila Male Stem Cell System. Cell Reports. 24: 3072-3086. PMID 30208329 DOI: 10.1016/j.celrep.2018.08.013  1
2018 Kim JY, Yang W, Forner J, Lohmann JU, Noh B, Noh YS. Epigenetic reprogramming by histone acetyltransferase HAG1/AtGCN5 is required for pluripotency acquisition in . The Embo Journal. PMID 30061313 DOI: 10.15252/embj.201798726  1
2018 Schürholz AK, Lopez-Salmeron V, Li Z, Forner J, Wenzl C, Gaillochet C, Augustin S, Vilches-Barro A, Fuchs M, Gebert M, Lohmann JU, Greb T, Wolf S. A Comprehensive Toolkit for Inducible, Cell Type-Specific Gene Expression in Arabidopsis. Plant Physiology. PMID 30026289 DOI: 10.1104/pp.18.00463  1
2018 Janocha D, Lohmann JU. From signals to stem cells and back again. Current Opinion in Plant Biology. 45: 136-142. PMID 30014888 DOI: 10.1016/j.pbi.2018.06.005  0.64
2018 Gaillochet C, Jamge S, van der Wal F, Angenent G, Immink R, Lohmann JU. A molecular network for functional versatility of HECATE transcription factors. The Plant Journal : For Cell and Molecular Biology. PMID 29667268 DOI: 10.1111/tpj.13930  1
2018 Brackmann K, Qi J, Gebert M, Jouannet V, Schlamp T, Grünwald K, Wallner ES, Novikova DD, Levitsky VG, Agustí J, Sanchez P, Lohmann JU, Greb T. Spatial specificity of auxin responses coordinates wood formation. Nature Communications. 9: 875. PMID 29491423 DOI: 10.1038/s41467-018-03256-2  1
2017 Gaillochet C, Stiehl T, Wenzl C, Ripoll JJ, Bailey-Steinitz LJ, Li L, Pfeiffer A, Miotk A, Hakenjos J, Forner J, Yanofsky MF, Marciniak-Czochra A, Lohmann JU. Control of plant cell fate transitions by transcriptional and hormonal signals. Elife. 6. PMID 29058667 DOI: 10.7554/eLife.30135  1
2017 de Luis Balaguer MA, Fisher AP, Clark NM, Fernandez-Espinosa MG, Möller BK, Weijers D, Lohmann JU, Williams C, Lorenzo O, Sozzani R. Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 28827319 DOI: 10.1073/Pnas.1707566114  0.04
2017 Zhao X, Bramsiepe J, Van Durme M, Komaki S, Prusicki MA, Maruyama D, Forner J, Medzihradszky A, Wijnker E, Harashima H, Lu Y, Schmidt A, Guthörl D, Logroño RS, Guan Y, ... ... Lohmann JU, et al. RETINOBLASTOMA RELATED1 mediates germline entry in Arabidopsis. Science (New York, N.Y.). 356. PMID 28450583 DOI: 10.1126/science.aaf6532  1
2016 Pfeiffer A, Wenzl C, Lohmann JU. Beyond flexibility: controlling stem cells in an ever changing environment. Current Opinion in Plant Biology. 35: 117-123. PMID 27918940 DOI: 10.1016/j.pbi.2016.11.014  1
2016 Greb T, Lohmann JU. Plant Stem Cells. Current Biology : Cb. 26: R816-21. PMID 27623267 DOI: 10.1016/j.cub.2016.07.070  1
2016 Pfeiffer A, Janocha D, Dong Y, Medzihradszky A, Schöne S, Daum G, Suzaki T, Forner J, Langenecker T, Rempel E, Schmid M, Wirtz M, Hell R, Lohmann JU. Integration of light and metabolic signals for stem cell activation at the shoot apical meristem. Elife. 5. PMID 27400267 DOI: 10.7554/eLife.17023  1
2015 Kriegel A, Andrés Z, Medzihradszky A, Krüger F, Scholl S, Delang S, Patir-Nebioglu MG, Gute G, Yang H, Murphy AS, Peer WA, Pfeiffer A, Krebs M, Lohmann JU, Schumacher K. Job Sharing in the Endomembrane System: Vacuolar Acidification Requires the Combined Activity of V-ATPase and V-PPase. The Plant Cell. PMID 26589552 DOI: 10.1105/Tpc.15.00733  1
2015 Schuster C, Gaillochet C, Lohmann JU. Arabidopsis HECATE genes function in phytohormone control during gynoecium development. Development (Cambridge, England). 142: 3343-50. PMID 26293302 DOI: 10.1242/dev.120444  1
2015 Forner J, Pfeiffer A, Langenecker T, Manavella PA, Lohmann JU. Correction: Germline-Transmitted Genome Editing in Arabidopsis thaliana Using TAL-Effector-Nucleases. Plos One. 10: e0133945. PMID 26192310 DOI: 10.1371/journal.pone.0133945  1
2015 Marín-de la Rosa N, Pfeiffer A, Hill K, Locascio A, Bhalerao RP, Miskolczi P, Grønlund AL, Wanchoo-Kohli A, Thomas SG, Bennett MJ, Lohmann JU, Blázquez MA, Alabadí D. Genome Wide Binding Site Analysis Reveals Transcriptional Coactivation of Cytokinin-Responsive Genes by DELLA Proteins. Plos Genetics. 11: e1005337. PMID 26134422 DOI: 10.1371/Journal.Pgen.1005337  1
2015 Gaillochet C, Lohmann JU. The never-ending story: from pluripotency to plant developmental plasticity. Development (Cambridge, England). 142: 2237-49. PMID 26130755 DOI: 10.1242/dev.117614  1
2015 Forner J, Pfeiffer A, Langenecker T, Manavella PA, Manavella P, Lohmann JU. Germline-transmitted genome editing in Arabidopsis thaliana Using TAL-effector-nucleases. Plos One. 10: e0121056. PMID 25822541 DOI: 10.1371/journal.pone.0121056  1
2015 Gaillochet C, Daum G, Lohmann JU. O cell, where art thou? The mechanisms of shoot meristem patterning. Current Opinion in Plant Biology. 23: 91-7. PMID 25449732 DOI: 10.1016/j.pbi.2014.11.002  1
2014 Daum G, Medzihradszky A, Suzaki T, Lohmann JU. A mechanistic framework for noncell autonomous stem cell induction in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 111: 14619-24. PMID 25246576 DOI: 10.1073/pnas.1406446111  1
2014 Vilarrasa-Blasi J, González-García MP, Frigola D, Fàbregas N, Alexiou KG, López-Bigas N, Rivas S, Jauneau A, Lohmann JU, Benfey PN, Ibañes M, Caño-Delgado AI. Regulation of plant stem cell quiescence by a brassinosteroid signaling module. Developmental Cell. 30: 36-47. PMID 24981610 DOI: 10.1016/j.devcel.2014.05.020  0.04
2014 Schuster C, Gaillochet C, Medzihradszky A, Busch W, Daum G, Krebs M, Kehle A, Lohmann JU. A regulatory framework for shoot stem cell control integrating metabolic, transcriptional, and phytohormone signals. Developmental Cell. 28: 438-49. PMID 24576426 DOI: 10.1016/j.devcel.2014.01.013  1
2014 Medzihradszky A, Schneitz K, Lohmann JU. Detection of mRNA expression patterns by nonradioactive in situ hybridization on histological sections of floral tissue. Methods in Molecular Biology (Clifton, N.J.). 1110: 275-93. PMID 24395263 DOI: 10.1007/978-1-4614-9408-9_14  1
2014 von Wangenheim D, Daum G, Lohmann JU, Stelzer EK, Maizel A. Live imaging of Arabidopsis development. Methods in Molecular Biology (Clifton, N.J.). 1062: 539-50. PMID 24057385 DOI: 10.1007/978-1-62703-580-4_28  1
2013 Lampropoulos A, Sutikovic Z, Wenzl C, Maegele I, Lohmann JU, Forner J. GreenGate---a novel, versatile, and efficient cloning system for plant transgenesis. Plos One. 8: e83043. PMID 24376629 DOI: 10.1371/journal.pone.0083043  1
2013 Lohmann J, Maizel A. MoD special issue on developmental plasticity and adaptation in plants. Mechanisms of Development. 130: 1. PMID 23332381 DOI: 10.1016/j.mod.2012.12.001  1
2012 Somorjai IM, Lohmann JU, Holstein TW, Zhao Z. Stem cells: a view from the roots. Biotechnology Journal. 7: 704-22. PMID 22581706 DOI: 10.1002/Biot.201100349  1
2011 Maier AT, Stehling-Sun S, Offenburger SL, Lohmann JU. The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control. Frontiers in Plant Science. 2: 79. PMID 22645551 DOI: 10.3389/fpls.2011.00079  1
2011 Parcy F, Lohmann JU. June bloom in Maratea. Development (Cambridge, England). 138: 4335-40. PMID 21937594 DOI: 10.1242/dev.067215  1
2010 Zhao Z, Andersen SU, Ljung K, Dolezal K, Miotk A, Schultheiss SJ, Lohmann JU. Hormonal control of the shoot stem-cell niche. Nature. 465: 1089-92. PMID 20577215 DOI: 10.1038/nature09126  1
2010 Busch W, Miotk A, Ariel FD, Zhao Z, Forner J, Daum G, Suzaki T, Schuster C, Schultheiss SJ, Leibfried A, Haubeiss S, Ha N, Chan RL, Lohmann JU. Transcriptional control of a plant stem cell niche. Developmental Cell. 18: 849-61. PMID 20493817 DOI: 10.1016/j.devcel.2010.03.012  1
2010 Buechel S, Leibfried A, To JP, Zhao Z, Andersen SU, Kieber JJ, Lohmann JU. Role of A-type ARABIDOPSIS RESPONSE REGULATORS in meristem maintenance and regeneration. European Journal of Cell Biology. 89: 279-84. PMID 20018401 DOI: 10.1016/j.ejcb.2009.11.016  1
2009 Lohmann JU, Nemhauser JL. Cell signalling and gene regulation. Current Opinion in Plant Biology. 12: 517-9. PMID 19783467 DOI: 10.1016/j.pbi.2009.09.001  1
2009 Maier AT, Stehling-Sun S, Wollmann H, Demar M, Hong RL, Haubeiss S, Weigel D, Lohmann JU. Dual roles of the bZIP transcription factor PERIANTHIA in the control of floral architecture and homeotic gene expression. Development (Cambridge, England). 136: 1613-20. PMID 19395639 DOI: 10.1242/dev.033647  1
2009 Schultheiss SJ, Busch W, Lohmann JU, Kohlbacher O, Rätsch G. KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. Bioinformatics (Oxford, England). 25: 2126-33. PMID 19389732 DOI: 10.1093/bioinformatics/btp278  1
2009 Fulton L, Batoux M, Vaddepalli P, Yadav RK, Busch W, Andersen SU, Jeong S, Lohmann JU, Schneitz K. DETORQUEO, QUIRKY, and ZERZAUST represent novel components involved in organ development mediated by the receptor-like kinase STRUBBELIG in Arabidopsis thaliana. Plos Genetics. 5: e1000355. PMID 19180193 DOI: 10.1371/journal.pgen.1000355  1
2008 Geier F, Lohmann JU, Gerstung M, Maier AT, Timmer J, Fleck C. A quantitative and dynamic model for plant stem cell regulation. Plos One. 3: e3553. PMID 18958283 DOI: 10.1371/journal.pone.0003553  1
2008 Skirycz A, Radziejwoski A, Busch W, Hannah MA, Czeszejko J, Kwa?niewski M, Zanor MI, Lohmann JU, De Veylder L, Witt I, Mueller-Roeber B. The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 56: 779-92. PMID 18665917 DOI: 10.1111/J.1365-313X.2008.03641.X  1
2008 Laubinger S, Sachsenberg T, Zeller G, Busch W, Lohmann JU, Rätsch G, Weigel D. Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 105: 8795-800. PMID 18550839 DOI: 10.1073/Pnas.0802493105  1
2008 Brüx A, Liu TY, Krebs M, Stierhof YD, Lohmann JU, Miersch O, Wasternack C, Schumacher K. Reduced V-ATPase activity in the trans-Golgi network causes oxylipin-dependent hypocotyl growth Inhibition in Arabidopsis. The Plant Cell. 20: 1088-100. PMID 18441211 DOI: 10.1105/tpc.108.058362  1
2008 Andersen SU, Buechel S, Zhao Z, Ljung K, Novák O, Busch W, Schuster C, Lohmann JU. Requirement of B2-type cyclin-dependent kinases for meristem integrity in Arabidopsis thaliana. The Plant Cell. 20: 88-100. PMID 18223038 DOI: 10.1105/tpc.107.054676  0.6
2008 Lohmann JU. Plant stem cells: Divide et impera Stem Cells: From Hydra to Man. 1-15. DOI: 10.1007/978-1-4020-8274-0_1  1
2007 Henz SR, Cumbie JS, Kasschau KD, Lohmann JU, Carrington JC, Weigel D, Schmid M. Distinct expression patterns of natural antisense transcripts in Arabidopsis. Plant Physiology. 144: 1247-55. PMID 17496106 DOI: 10.1104/pp.107.100396  1
2007 Busch W, Lohmann JU. Profiling a plant: expression analysis in Arabidopsis. Current Opinion in Plant Biology. 10: 136-41. PMID 17291825 DOI: 10.1016/j.pbi.2007.01.002  1
2006 Levesque MP, Vernoux T, Busch W, Cui H, Wang JY, Blilou I, Hassan H, Nakajima K, Matsumoto N, Lohmann JU, Scheres B, Benfey PN. Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. Plos Biology. 4: e143. PMID 16640459 DOI: 10.1371/Journal.Pbio.0040143  1
2006 Wittlieb J, Khalturin K, Lohmann JU, Anton-Erxleben F, Bosch TC. Transgenic Hydra allow in vivo tracking of individual stem cells during morphogenesis. Proceedings of the National Academy of Sciences of the United States of America. 103: 6208-11. PMID 16556723 DOI: 10.1073/Pnas.0510163103  1
2005 Leibfried A, To JP, Busch W, Stehling S, Kehle A, Demar M, Kieber JJ, Lohmann JU. WUSCHEL controls meristem function by direct regulation of cytokinin-inducible response regulators. Nature. 438: 1172-5. PMID 16372013 DOI: 10.1038/nature04270  1
2005 Wigge PA, Kim MC, Jaeger KE, Busch W, Schmid M, Lohmann JU, Weigel D. Integration of spatial and temporal information during floral induction in Arabidopsis. Science (New York, N.Y.). 309: 1056-9. PMID 16099980 DOI: 10.1126/science.1114358  1
2005 Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Schölkopf B, Weigel D, Lohmann JU. A gene expression map of Arabidopsis thaliana development. Nature Genetics. 37: 501-6. PMID 15806101 DOI: 10.1038/ng1543  1
2004 Lohmann JU, Weigel D. From tough nuts to touch-me-nots. Cell. 116: 763-4. PMID 15035977 DOI: 10.1016/S0092-8674(04)00254-5  1
2003 Schmid M, Uhlenhaut NH, Godard F, Demar M, Bressan R, Weigel D, Lohmann JU. Dissection of floral induction pathways using global expression analysis. Development (Cambridge, England). 130: 6001-12. PMID 14573523 DOI: 10.1242/dev.00842  1
2002 Bosch TC, Augustin R, Gellner K, Khalturin K, Lohmann JU. In vivo electroporation for genetic manipulations of whole Hydra polyps. Differentiation; Research in Biological Diversity. 70: 140-7. PMID 12147133 DOI: 10.1046/J.1432-0436.2002.700403.X  1
2002 Lohmann JU, Weigel D. Building beauty: the genetic control of floral patterning. Developmental Cell. 2: 135-42. PMID 11832239 DOI: 10.1016/S1534-5807(02)00122-3  1
2001 Lohmann JU, Hong RL, Hobe M, Busch MA, Parcy F, Simon R, Weigel D. A molecular link between stem cell regulation and floral patterning in Arabidopsis. Cell. 105: 793-803. PMID 11440721  1
2000 Lohmann JU, Bosch TC. The novel peptide HEADY specifies apical fate in a simple radially symmetric metazoan. Genes & Development. 14: 2771-7. PMID 11069893 DOI: 10.1101/Gad.830100  1
1999 Lohmann JU, Endl I, Bosch TC. Silencing of developmental genes in Hydra. Developmental Biology. 214: 211-4. PMID 10491269 DOI: 10.1006/Dbio.1999.9407  1
1999 Reinhardt B, Frank U, Gellner K, Lohmann JU, Bosch TC. High-resolution, fluorescence-based differential display on a DNA sequencer followed by band excision. Biotechniques. 27: 268-71. PMID 10457828 DOI: 10.2144/99272Bm11  1
1999 Endl I, Lohmann JU, Bosch TC. Head-specific gene expression in Hydra: complexity of DNA- protein interactions at the promoter of ks1 is inversely correlated to the head activation potential. Proceedings of the National Academy of Sciences of the United States of America. 96: 1445-50. PMID 9990043 DOI: 10.1073/Pnas.96.4.1445  1
1998 Bosch TC, Lohmann JU. Identification of differentially expressed genes by nonradioactive differential display of messenger RNA Methods in Molecular Biology (Clifton, N.J.). 86: 153-160. PMID 9664466 DOI: 10.1385/0-89603-494-1:153  1
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