Brian Dilkes, Ph.D. - Publications

Affiliations: 
1994-2003 Plant Science University of Arizona, Tucson, AZ 
 2003-2006 Biology University of Washington, Seattle, Seattle, WA 
 2006-2009 Plant Biology UC Davis Genome Center 
 2009-2015 Horticulture and Landscape Architecture Purdue University, West Lafayette, IN, United States 
 2015- Biochemistry Purdue University, West Lafayette, IN, United States 
Area:
Genetics, Plant Physiology

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Khangura R, Johal GGS, Dilkes BP. Variation in maize chlorophyll biosynthesis alters plant architecture. Plant Physiology. PMID 32641472 DOI: 10.1104/pp.20.00306  1
2020 Huang L, Li X, Zhang W, Ung N, Liu N, Yin X, Li Y, Mcewan RE, Dilkes BP, Dai M, Hicks GR, Raikhel NV, Staiger CJ, Zhang C. Endosidin20 Targets the Cellulose Synthase Catalytic Domain to Inhibit Cellulose Biosynthesis. The Plant Cell. PMID 32327535 DOI: 10.1105/tpc.20.00202  1
2019 Khangura RS, Venkata BP, Marla SR, Mickelbart MV, Dhungana S, Braun DM, Dilkes BP, Johal GS. Interaction Between Induced and Natural Variation at Delays Reproductive Maturity in Maize. G3 (Bethesda, Md.). PMID 31822516 DOI: 10.1534/g3.119.400838  1
2019 Fikas AA, Dilkes BP, Baxter I. Multivariate analysis reveals environmental and genetic determinants of element covariation in the maize grain ionome. Plant Direct. 3: e00139. PMID 31245778 DOI: 10.1002/pld3.139  1
2018 Yin J, Gosney MJ, Dilkes BP, Mickelbart MV. Dark period transcriptomic and metabolic profiling of two diverse accessions. Plant Direct. 2: e00032. PMID 31245703 DOI: 10.1002/pld3.32  0.2
2018 Khangura RS, Marla S, Venkata BP, Heller NJ, Johal GS, Dilkes BP. A Modifier of the Allele Uncovers a Cryptic Phenotypic Impact of -regulatory Variation in Maize. G3 (Bethesda, Md.). PMID 30518539 DOI: 10.1534/g3.118.200798  1
2018 Schaefer R, Michno JM, Jeffers J, Hoekenga OA, Dilkes BP, Baxter IR, Myers C. Integrating co-expression networks with GWAS to prioritize causal genes in maize. The Plant Cell. PMID 30413654 DOI: 10.1105/tpc.18.00299  0.01
2018 Marla SR, Chu K, Chintamanani S, Multani DS, Klempien A, DeLeon A, Bong-Suk K, Dunkle LD, Dilkes BP, Johal GS. Adult plant resistance in maize to northern leaf spot is a feature of partial loss-of-function alleles of Hm1. Plos Pathogens. 14: e1007356. PMID 30332488 DOI: 10.1371/journal.ppat.1007356  1
2018 Sindhu A, Janick-Buckner D, Buckner B, Gray J, Zehr U, Dilkes BP, Johal GS. Propagation of cell death in dropdead1, a sorghum ortholog of the maize lls1 mutant. Plos One. 13: e0201359. PMID 30199528 DOI: 10.1371/journal.pone.0201359  1
2018 Addo-Quaye C, Tuinstra M, Carraro N, Weil C, Dilkes BP. Whole Genome Sequence Accuracy Is Improved by Replication in a Population of Mutagenized Sorghum. G3 (Bethesda, Md.). PMID 29378822 DOI: 10.1534/g3.117.300301  1
2017 Best NB, Johal G, Dilkes BP. Phytohormone inhibitor treatments phenocopy brassinosteroid-gibberellin dwarf mutant interactions in maize. Plant Direct. 1. PMID 31240275 DOI: 10.1002/pld3.9  1
2017 Yang J, Thames S, Best NB, Jiang H, Huang P, Dilkes BP, Eveland AL. Brassinosteroids Modulate Meristem Fate and Differentiation of Unique Inflorescence Morphology in Setaria viridis. The Plant Cell. PMID 29263085 DOI: 10.1105/tpc.17.00816  1
2017 Dolan WL, Dilkes BP, Stout JM, Bonawitz ND, Chapple C. Mediator Complex Subunits MED2, MED5, MED16, and MED23 Genetically Interact in the Regulation of Phenylpropanoid Biosynthesis. The Plant Cell. PMID 29203634 DOI: 10.1105/tpc.17.00282  1
2016 Addo-Quaye C, Buescher E, Best N, Chaikam V, Baxter I, Dilkes BP. Forward Genetics by Sequencing EMS Variation Induced Inbred Lines. G3 (Bethesda, Md.). PMID 28040779 DOI: 10.1534/g3.116.029660  1
2016 Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, ... Dilkes B, et al. A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation. Cell Research. PMID 27934869 DOI: 10.1038/cr.2016.147  0.12
2016 Asaro A, Ziegler G, Ziyomo C, Hoekenga O, Dilkes B, Baxter I. The Interaction of Genotype and Environment Determines Variation in the Maize Kernel Ionome. G3 (Bethesda, Md.). PMID 27770027 DOI: 10.1534/g3.116.034827  1
2016 Huang XY, Chao DY, Koprivova A, Danku J, Wirtz M, Müller S, Sandoval FJ, Bauwe H, Roje S, Dilkes B, Hell R, Kopriva S, Salt DE. Nuclear Localised MORE SULPHUR ACCUMULATION1 Epigenetically Regulates Sulphur Homeostasis in Arabidopsis thaliana. Plos Genetics. 12: e1006298. PMID 27622452 DOI: 10.1371/journal.pgen.1006298  1
2016 Silva-Guzman M, Addo-Quaye C, Dilkes BP. Re-Evaluation of Reportedly Metal Tolerant Arabidopsis thaliana Accessions. Plos One. 11: e0130679. PMID 27467746 DOI: 10.1371/journal.pone.0130679  1
2016 Chettoor AM, Phillips AR, Coker CT, Dilkes B, Evans MM. Maternal Gametophyte Effects on Seed Development in Maize. Genetics. PMID 27466227 DOI: 10.1534/genetics.116.191833  1
2016 Best NB, Hartwig T, Budka J, Fujioka S, Johal G, Schulz B, Dilkes BP. nana plant2 Encodes a Maize Ortholog of the Arabidopsis Brassinosteroid Biosynthesis Gene DWARF1, Identifying Developmental Interactions between Brassinosteroids and Gibberellins. Plant Physiology. 171: 2633-47. PMID 27288361 DOI: 10.1104/pp.16.00399  1
2016 Carter B, Henderson JT, Svedin E, Fiers M, McCarthy K, Smith A, Guo C, Bishop B, Zhang H, Riksen T, Shockley A, Dilkes BP, Boutilier K, Ogas J. Crosstalk Between Sporophyte and Gametophyte Generations Is Promoted by CHD3 Chromatin Remodelers in Arabidopsis thaliana. Genetics. PMID 27075727 DOI: 10.1534/genetics.115.180141  1
2016 Shakoor N, Ziegler G, Dilkes BP, Brenton Z, Boyles R, Connolly EL, Kresovich S, Baxter IR. Integration of experiments across diverse environments identifies the genetic determinants of variation in Sorghum bicolor seed element composition. Plant Physiology. PMID 26896393 DOI: 10.1104/pp.15.01971  1
2015 Strauch RC, Svedin E, Dilkes B, Chapple C, Li X. Discovery of a novel amino acid racemase through exploration of natural variation in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. PMID 26324904 DOI: 10.1073/pnas.1503272112  1
2014 Buescher EM, Moon J, Runkel A, Hake S, Dilkes BP. Natural variation at sympathy for the ligule controls penetrance of the semidominant Liguleless narrow-R mutation in Zea mays. G3 (Bethesda, Md.). 4: 2297-306. PMID 25344411 DOI: 10.1534/g3.114.014183  1
2014 Maharjan PM, Dilkes BP, Fujioka S, P?n?ík A, Ljung K, Burow M, Halkier BA, Choe S. Arabidopsis gulliver1/SUPERROOT2-7 identifies a metabolic basis for auxin and brassinosteroid synergy. The Plant Journal : For Cell and Molecular Biology. 80: 797-808. PMID 25256367 DOI: 10.1111/tpj.12678  1
2014 Chao DY, Baraniecka P, Danku J, Koprivova A, Lahner B, Luo H, Yakubova E, Dilkes B, Kopriva S, Salt DE. Variation in sulfur and selenium accumulation is controlled by naturally occurring isoforms of the key sulfur assimilation enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 across the Arabidopsis species range. Plant Physiology. 166: 1593-608. PMID 25245030 DOI: 10.1104/pp.114.247825  1
2014 Li X, Svedin E, Mo H, Atwell S, Dilkes BP, Chapple C. Exploiting natural variation of secondary metabolism identifies a gene controlling the glycosylation diversity of dihydroxybenzoic acids in Arabidopsis thaliana Genetics. 198: 1267-1276. PMID 25173843 DOI: 10.1534/genetics.114.168690  1
2014 Henry IM, Dilkes BP, Tyagi A, Gao J, Christensen B, Comai L. The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis. The Plant Cell. 26: 181-94. PMID 24464296 DOI: 10.1105/tpc.113.120626  1
2013 Cheon J, Fujioka S, Dilkes BP, Choe S. Brassinosteroids regulate plant growth through distinct signaling pathways in Selaginella and Arabidopsis. Plos One. 8: e81938. PMID 24349155 DOI: 10.1371/journal.pone.0081938  1
2013 Burkart-Waco D, Ngo K, Dilkes B, Josefsson C, Comai L. Early disruption of maternal-zygotic interaction and activation of defense-like responses in Arabidopsis interspecific crosses. The Plant Cell. 25: 2037-55. PMID 23898028 DOI: 10.1105/tpc.112.108258  1
2013 Krothapalli K, Buescher EM, Li X, Brown E, Chapple C, Dilkes BP, Tuinstra MR. Forward genetics by genome sequencing reveals that rapid cyanide release deters insect herbivory of Sorghum bicolor. Genetics. 195: 309-18. PMID 23893483 DOI: 10.1534/genetics.113.149567  1
2013 Chao DY, Dilkes B, Luo H, Douglas A, Yakubova E, Lahner B, Salt DE. Polyploids exhibit higher potassium uptake and salinity tolerance in Arabidopsis. Science (New York, N.Y.). 341: 658-9. PMID 23887874 DOI: 10.1126/science.1240561  1
2012 Albertin CB, Bonnaud L, Brown CT, Crookes-Goodson WJ, da Fonseca RR, Di Cristo C, Dilkes BP, Edsinger-Gonzales E, Freeman RM, Hanlon RT, Koenig KM, Lindgren AR, Martindale MQ, Minx P, Moroz LL, et al. Cephalopod genomics: A plan of strategies and organization. Standards in Genomic Sciences. 7: 175-88. PMID 23451296 DOI: 10.4056/sigs.3136559  1
2012 Hollister JD, Arnold BJ, Svedin E, Xue KS, Dilkes BP, Bomblies K. Genetic adaptation associated with genome-doubling in autotetraploid Arabidopsis arenosa. Plos Genetics. 8: e1003093. PMID 23284289 DOI: 10.1371/journal.pgen.1003093  1
2012 Baxter I, Dilkes BP. Elemental profiles reflect plant adaptations to the environment. Science (New York, N.Y.). 336: 1661-3. PMID 22745418 DOI: 10.1126/science.1219992  1
2012 Burkart-Waco D, Josefsson C, Dilkes B, Kozloff N, Torjek O, Meyer R, Altmann T, Comai L. Hybrid incompatibility in Arabidopsis is determined by a multiple-locus genetic network Plant Physiology. 158: 801-812. PMID 22135429 DOI: 10.1104/pp.111.188706  1
2012 Correa R, Stanga J, Larget B, Roznowski A, Shu G, Dilkes B, Baum DA. An assessment of transgenomics as a tool for identifying genes involved in the evolutionary differentiation of closely related plant species. The New Phytologist. 193: 494-503. PMID 22077724 DOI: 10.1111/j.1469-8137.2011.03949.x  1
2010 Chang PL, Dilkes BP, McMahon M, Comai L, Nuzhdin SV. Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners. Genome Biology. 11: R125. PMID 21182768 DOI: 10.1186/gb-2010-11-12-r125  1
2010 Henry IM, Dilkes BP, Miller ES, Burkart-Waco D, Comai L. Phenotypic consequences of aneuploidy in Arabidopsis thaliana Genetics. 186: 1231-1245. PMID 20876566 DOI: 10.1534/genetics.110.121079  1
2010 Pignatta D, Dilkes BP, Yoo SY, Henry IM, Madlung A, Doerge RW, Jeffrey Chen Z, Comai L. Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling. The New Phytologist. 186: 194-206. PMID 20409178 DOI: 10.1111/j.1469-8137.2010.03198.x  1
2009 Henry IM, Dilkes BP, Tyagi AP, Lin HY, Comai L. Dosage and parent-of-origin effects shaping aneuploid swarms in A. thaliana Heredity. 103: 458-468. PMID 19603060 DOI: 10.1038/hdy.2009.81  1
2009 Walia H, Josefsson C, Dilkes B, Kirkbride R, Harada J, Comai L. Dosage-Dependent Deregulation of an AGAMOUS-LIKE Gene Cluster Contributes to Interspecific Incompatibility Current Biology. 19: 1128-1132. PMID 19559614 DOI: 10.1016/j.cub.2009.05.068  1
2008 Dilkes BP, Spielman M, Weizbauer R, Watson B, Burkart-Waco D, Scott RJ, Comai L. The maternally expressed WRKY transcription factor TTG2 controls lethality in interploidy crosses of Arabidopsis Plos Biology. 6. PMID 19071961  1
2008 Pignatta D, Dilkes B, Wroblewski T, Michelmore RW, Comai L. Transgene-induced gene silencing is not affected by a change in ploidy level Plos One. 3. PMID 18725969 DOI: 10.1371/journal.pone.0003061  1
2007 Henry IM, Dilkes BP, Comai L. Genetic basis for dosage sensitivity in Arabidopsis thaliana Plos Genetics. 3. PMID 17465685 DOI: 10.1371/journal.pgen.0030070  1
2006 Henry IM, Dilkes BP, Comai L. Molecular karyotyping and aneuploidy detection in Arabidopsis thaliana using quantitative fluorescent polymerase chain reaction Plant Journal. 48: 307-319. PMID 16995901 DOI: 10.1111/j.1365-313X.2006.02871.x  1
2006 Josefsson C, Dilkes B, Comai L. Parent-Dependent Loss of Gene Silencing during Interspecies Hybridization Current Biology. 16: 1322-1328. PMID 16824920 DOI: 10.1016/j.cub.2006.05.045  1
2005 Coelho CM, Dante RA, Sabelli PA, Sun Y, Dilkes BP, Gordon-Kamm WJ, Larkins BA. Cyclin-dependent kinase inhibitors in maize endosperm and their potential role in endoreduplication. Plant Physiology. 138: 2323-36. PMID 16055680 DOI: 10.1104/pp.105.063917  1
2005 Henry IM, Dilkes BP, Young K, Watson B, Wu H, Comai L. Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response Genetics. 170: 1979-1988. PMID 15944363 DOI: 10.1534/genetics.104.037788  1
2004 Dilkes BP, Comai L. A differential dosage hypothesis for parental effects in seed development Plant Cell. 16: 3174-3180. PMID 15579806 DOI: 10.1105/tpc.104.161230  1
2002 Hunter BG, Beatty MK, Singletary GW, Hamaker BR, Dilkes BP, Larkins BA, Jung R. Maize opaque endosperm mutations create extensive changes in patterns of gene expression. The Plant Cell. 14: 2591-612. PMID 12368507 DOI: 10.1105/tpc.003905  1
2002 Gordon-Kamm W, Dilkes BP, Lowe K, Hoerster G, Sun X, Ross M, Church L, Bunde C, Farrell J, Hill P, Maddock S, Snyder J, Sykes L, Li Z, Woo YM, et al. Stimulation of the cell cycle and maize transformation by disruption of the plant retinoblastoma pathway. Proceedings of the National Academy of Sciences of the United States of America. 99: 11975-80. PMID 12185243 DOI: 10.1073/pnas.142409899  1
2002 Dilkes BP, Dante RA, Coelho C, Larkins BA. Genetic analyses of endoreduplication in Zea mays endosperm: evidence of sporophytic and zygotic maternal control. Genetics. 160: 1163-77. PMID 11901131  1
1999 Sun Y, Dilkes BP, Zhang C, Dante RA, Carneiro NP, Lowe KS, Jung R, Gordon-Kamm WJ, Larkins BA. Characterization of maize (Zea mays L.) Wee1 and its activity in developing endosperm. Proceedings of the National Academy of Sciences of the United States of America. 96: 4180-5. PMID 10097184 DOI: 10.1073/pnas.96.7.4180  1
1999 Choe S, Dilkes BP, Gregory BD, Ross AS, Yuan H, Noguchi T, Fujioka S, Takatsuto S, Tanaka A, Yoshida S, Tax FE, Feldmann KA. The Arabidopsis dwarf1 mutant is defective in the conversion of 24-methylenecholesterol to campesterol in brassinosteroid biosynthesis Plant Physiology. 119: 897-907. PMID 10069828 DOI: 10.1104/pp.119.3.897  1
1998 Choe S, Dilkes BP, Fujioka S, Takatsuto S, Sakurai A, Feldmann KA. The DWF4 gene of Arabidopsis encodes a cytochrome P450 that mediates multiple 22alpha-hydroxylation steps in brassinosteroid biosynthesis. The Plant Cell. 10: 231-43. PMID 9490746 DOI: 10.1105/tpc.10.2.231  1
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