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Miriam Louise Gifford, PhD - Publications

Affiliations: 
2009- School of Life Sciences University of Warwick, Coventry, England, United Kingdom 
Area:
Nodulation, cell type specific root analysis, transcriptomics, systems biology, nitrogen responses
Website:
http://www2.warwick.ac.uk/fac/sci/lifesci/research/systemsdev/
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wilkinson H, Coppock A, Richmond BL, Lagunas B, Gifford ML. Plant-Environment Response Pathway Regulation Uncovered by Investigating Non-Typical Legume Symbiosis and Nodulation. Plants (Basel, Switzerland). 12. PMID 37653881 DOI: 10.3390/plants12101964  0.807
2023 Lagunas B, Richards L, Sergaki C, Burgess J, Pardal AJ, Hussain RMF, Richmond BL, Baxter L, Roy P, Pakidi A, Stovold G, Vázquez S, Ott S, Schäfer P, Gifford ML. Rhizobial nitrogen fixation efficiency shapes endosphere bacterial communities and Medicago truncatula host growth. Microbiome. 11: 146. PMID 37394496 DOI: 10.1186/s40168-023-01592-0  0.793
2022 Parkinson SJ, Tungsirisurp S, Joshi C, Richmond BL, Gifford ML, Sikder A, Lynch I, O'Reilly RK, Napier RM. Polymer nanoparticles pass the plant interface. Nature Communications. 13: 7385. PMID 36450796 DOI: 10.1038/s41467-022-35066-y  0.772
2022 Richmond BL, Coelho CL, Wilkinson H, McKenna J, Ratchinski P, Schwarze M, Frost M, Lagunas B, Gifford ML. Elucidating connections between the strigolactone biosynthesis pathway, flavonoid production and root system architecture in Arabidopsis thaliana. Physiologia Plantarum. e13681. PMID 35362177 DOI: 10.1111/ppl.13681  0.791
2021 Baxter L, Roy P, Picot E, Watts J, Jones A, Wilkinson H, Schäfer P, Gifford M, Lagunas B. Comparative Genomics across Three Ensifer Species Using a New Complete Genome Sequence of the Medicago Symbiont () WSM1022. Microorganisms. 9. PMID 34946030 DOI: 10.3390/microorganisms9122428  0.749
2021 Achom M, Roy P, Lagunas B, Picot E, Richards L, Bonyadi-Pour R, Pardal AJ, Baxter L, Richmond B, Aschauer N, Fletcher E, Rowson M, Blackwell J, Rich-Griffin C, Mysore KS, ... ... Gifford ML, et al. Plant circadian clock control of Medicago truncatula nodulation via regulation of Nodule Cysteine-Rich peptides. Journal of Experimental Botany. PMID 34850882 DOI: 10.1093/jxb/erab526  0.778
2020 Walker L, Lagunas B, Gifford ML. Determinants of Host Range Specificity in Legume-Rhizobia Symbiosis. Frontiers in Microbiology. 11: 585749. PMID 33329456 DOI: 10.3389/fmicb.2020.585749  0.817
2020 Carroll D, Holden N, Gifford ML, Dupuy LX. Framework for Quantification of the Dynamics of Root Colonization by Isolate SBW25. Frontiers in Microbiology. 11: 585443. PMID 33101260 DOI: 10.3389/fmicb.2020.585443  0.806
2020 Roy P, Achom M, Wilkinson H, Lagunas B, Gifford ML. Symbiotic Outcome Modified by the Diversification from 7 to over 700 Nodule-Specific Cysteine-Rich Peptides. Genes. 11. PMID 32218172 DOI: 10.3390/Genes11040348  0.744
2019 Lagunas B, Dodd IC, Gifford ML. A 'nodemap' to sustainable maize roots: linking nitrogen and water uptake improvements. Journal of Experimental Botany. PMID 31424538 DOI: 10.1093/Jxb/Erz315  0.797
2019 Ntoukakis V, Gifford ML. Plant-microbe interactions: tipping the balance. Journal of Experimental Botany. PMID 31306482 DOI: 10.1093/Jxb/Erz321  0.437
2019 Lagunas B, Achom M, Bonyadi-Pour R, Pardal AJ, Richmond BL, Sergaki C, Vázquez S, Schäfer P, Ott S, Hammond J, Gifford ML. Regulation of resource partitioning coordinates nitrogen and rhizobia responses and autoregulation of nodulation in the legume Medicago truncatula. Molecular Plant. PMID 30953787 DOI: 10.1016/J.Molp.2019.03.014  0.779
2018 Sergaki C, Lagunas B, Lidbury I, Gifford ML, Schäfer P. Challenges and Approaches in Microbiome Research: From Fundamental to Applied. Frontiers in Plant Science. 9: 1205. PMID 30174681 DOI: 10.3389/Fpls.2018.01205  0.779
2018 Lagunas B, Walker L, Hussain RMF, Hands-Portman I, Woolley-Allen K, Gifford ML. Histological Profiling Over Time to Optimize Root Cell Type-Specific Reporter Lines for Cell Sorting. Methods in Molecular Biology (Clifton, N.J.). 1761: 165-175. PMID 29525956 DOI: 10.1007/978-1-4939-7747-5_12  0.759
2017 Goyet V, Billard E, Pouvreau JB, Lechat MM, Pelletier S, Bahut M, Monteau F, Spíchal L, Delavault P, Montiel G, Simier P, Gifford M. Haustorium initiation in the obligate parasitic plant Phelipanche ramosa involves a host-exudated cytokinin signal. Journal of Experimental Botany. PMID 29069455 DOI: 10.1093/Jxb/Erx359  0.366
2017 Walker L, Boddington C, Jenkins D, Wang Y, Grønlund JT, Hulsmans J, Kumar S, Patel D, Moore JD, Carter A, Samavedam S, Bomono G, Hersh DS, Coruzzi GM, Burroughs NJ, ... Gifford ML, et al. Root architecture shaping by the environment is orchestrated by dynamic gene expression in space and time. The Plant Cell. PMID 28893852 DOI: 10.1105/Tpc.16.00961  0.804
2016 Ferrández-Ayela A, Sánchez-García AB, Martínez-Andújar C, Kevei Z, Gifford ML, Thompson AJ, Pérez-Alfocea F, Pérez-Pérez JM. Identification of novel stress-responsive biomarkers from gene expression datasets in tomato roots. Functional Plant Biology : Fpb. 43: 783-796. PMID 32480503 DOI: 10.1071/Fp15385  0.375
2015 Vernié T, Kim J, Frances L, Ding Y, Sun J, Guan D, Niebel A, Gifford ML, de Carvalho-Niebel F, Oldroyd GE. The NIN Transcription Factor Coordinates Diverse Nodulation Programs in Different Tissues of the Medicago truncatula Root. The Plant Cell. PMID 26672071 DOI: 10.1105/Tpc.15.00461  0.406
2015 Coker TL, Cevik V, Beynon JL, Gifford ML. Spatial dissection of the Arabidopsis thaliana transcriptional response to downy mildew using Fluorescence Activated Cell Sorting. Frontiers in Plant Science. 6: 527. PMID 26217372 DOI: 10.3389/Fpls.2015.00527  0.463
2015 Reitz MU, Gifford ML, Schäfer P. Hormone activities and the cell cycle machinery in immunity-triggered growth inhibition. Journal of Experimental Botany. 66: 2187-97. PMID 25821072 DOI: 10.1093/Jxb/Erv106  0.342
2015 Lagunas B, Schäfer P, Gifford ML. Housing helpful invaders: the evolutionary and molecular architecture underlying plant root-mutualist microbe interactions. Journal of Experimental Botany. 66: 2177-86. PMID 25743160 DOI: 10.1093/Jxb/Erv038  0.818
2015 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Correction: Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture (Proceedings of the National Academy of Sciences of the United States of America (2015) 110 (15133-15138) DOI: 0.1073/pnas.1305883110) Proceedings of the National Academy of Sciences of the United States of America. 112: E2555. DOI: 10.1073/Pnas.1507065112  0.756
2014 Wang Y, Penfold CA, Hodgson DA, Gifford ML, Burroughs NJ. Correcting for link loss in causal network inference caused by regulator interference. Bioinformatics (Oxford, England). 30: 2779-86. PMID 24947751 DOI: 10.1093/Bioinformatics/Btu388  0.326
2013 Carter AD, Bonyadi R, Gifford ML. The use of fluorescence-activated cell sorting in studying plant development and environmental responses. The International Journal of Developmental Biology. 57: 545-52. PMID 24166437 DOI: 10.1387/Ijdb.130195Mg  0.476
2013 Gifford ML, Banta JA, Katari MS, Hulsmans J, Chen L, Ristova D, Tranchina D, Purugganan MD, Coruzzi GM, Birnbaum KD. Plasticity regulators modulate specific root traits in discrete nitrogen environments. Plos Genetics. 9: e1003760. PMID 24039603 DOI: 10.1371/Journal.Pgen.1003760  0.772
2013 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture. Proceedings of the National Academy of Sciences of the United States of America. 110: 15133-8. PMID 23980140 DOI: 10.1073/Pnas.1305883110  0.778
2012 Grønlund JT, Eyres A, Kumar S, Buchanan-Wollaston V, Gifford ML. Cell specific analysis of Arabidopsis leaves using fluorescence activated cell sorting. Journal of Visualized Experiments : Jove. PMID 23070217 DOI: 10.3791/4214  0.446
2008 Gifford ML, Dean A, Gutierrez RA, Coruzzi GM, Birnbaum KD. Cell-specific nitrogen responses mediate developmental plasticity. Proceedings of the National Academy of Sciences of the United States of America. 105: 803-8. PMID 18180456 DOI: 10.1073/Pnas.0709559105  0.795
2007 Gutiérrez RA, Gifford ML, Poultney C, Wang R, Shasha DE, Coruzzi GM, Crawford NM. Insights into the genomic nitrate response using genetics and the Sungear Software System. Journal of Experimental Botany. 58: 2359-67. PMID 17470441 DOI: 10.1093/Jxb/Erm079  0.651
2007 Poultney CS, Gutiérrez RA, Katari MS, Gifford ML, Paley WB, Coruzzi GM, Shasha DE. Sungear: interactive visualization and functional analysis of genomic datasets. Bioinformatics (Oxford, England). 23: 259-61. PMID 17018536 DOI: 10.1093/Bioinformatics/Btl496  0.766
2006 Gifford ML, Gutierrez RA, Birnbaum KD, Coruzzi GM. A systems approach to understanding N_control of gene networks in the Arabidopsis root Developmental Biology. 295: 334. DOI: 10.1016/J.Ydbio.2006.04.041  0.781
2005 Gifford ML, Robertson FC, Soares DC, Ingram GC. ARABIDOPSIS CRINKLY4 function, internalization, and turnover are dependent on the extracellular crinkly repeat domain. The Plant Cell. 17: 1154-66. PMID 15772284 DOI: 10.1105/Tpc.104.029975  0.67
2003 Gifford ML, Dean S, Ingram GC. The Arabidopsis ACR4 gene plays a role in cell layer organisation during ovule integument and sepal margin development. Development (Cambridge, England). 130: 4249-58. PMID 12900442 DOI: 10.1242/Dev.00634  0.677
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