Matthew Brooks - Publications

New York University, New York, NY, United States 

129 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Han S, Okawa S, Wilkinson GA, Ghazale H, Adnani L, Dixit R, Tavares L, Faisal I, Brooks MJ, Cortay V, Zinyk D, Sivitilli A, Li S, Malik F, Ilnytskyy Y, et al. Proneural genes define ground-state rules to regulate neurogenic patterning and cortical folding. Neuron. PMID 34407390 DOI: 10.1016/j.neuron.2021.07.007  1
2021 Brooks M, Beauvais BM, Kruse CS, Fulton L, Mileski M, Ramamonjiarivelo Z, Shanmugam R, Lieneck C. Accreditation and Certification: Do They Improve Hospital Financial and Quality Performance? Healthcare (Basel, Switzerland). 9. PMID 34356265 DOI: 10.3390/healthcare9070887  1
2021 Bloom JE, Andrew E, Nehme Z, Dinh DT, Fernando H, Shi WY, Vriesendorp P, Nanayakarra S, Dawson LP, Brennan A, Noaman S, Layland J, William J, Al-Fiadh A, Brooks M, et al. Pre-hospital heparin use for ST-elevation myocardial infarction is safe and improves angiographic outcomes. European Heart Journal. Acute Cardiovascular Care. PMID 34189566 DOI: 10.1093/ehjacc/zuab032  0.01
2021 Beauvais B, Kruse CS, Fulton L, Shanmugam R, Ramamonjiarivelo Z, Brooks M. Association of Electronic Health Record Vendors With Hospital Financial and Quality Performance: Retrospective Data Analysis. Journal of Medical Internet Research. 23: e23961. PMID 33851924 DOI: 10.2196/23961  1
2021 Alvarez JM, Brooks MD, Swift J, Coruzzi GM. Time-Based Systems Biology Approaches to Capture and Model Dynamic Gene Regulatory Networks. Annual Review of Plant Biology. PMID 33667112 DOI: 10.1146/annurev-arplant-081320-090914  1
2021 Brooks MD, Juang CL, Katari MS, Alvarez JM, Pasquino A, Shih HJ, Huang J, Shanks C, Cirrone J, Coruzzi GM. ConnecTF: A platform to integrate transcription factor-gene interactions and validate regulatory networks. Plant Physiology. 185: 49-66. PMID 33631799 DOI: 10.1093/plphys/kiaa012  1
2021 DiStefano TJ, Chen HY, Panebianco C, Kaya KD, Brooks MJ, Gieser L, Morgan NY, Pohida T, Swaroop A. Accelerated and Improved Differentiation of Retinal Organoids from Pluripotent Stem Cells in Rotating-Wall Vessel Bioreactors. Stem Cell Reports. 16: 224. PMID 33440179 DOI: 10.1016/j.stemcr.2020.12.006  1
2021 Fulton L, Lieneck C, Ramamonjiarivelo Z, Kruse CS, Brooks MS. Competency assessment of an undergraduate program using a third-party, objective pre-post examination. Bmc Medical Education. 21: 21. PMID 33407417 DOI: 10.1186/s12909-020-02448-z  1
2020 Kruse CS, Beauvais BM, Brooks MS, Mileski M, Fulton LV. Models for Heart Failure Admissions and Admission Rates, 2016 through 2018. Healthcare (Basel, Switzerland). 9. PMID 33375483 DOI: 10.3390/healthcare9010022  1
2020 Brooks MM, Mueller JT, Thiede BC. County Reclassifications and Rural-Urban Mortality Disparities in the United States (1970-2018). American Journal of Public Health. e1-e3. PMID 33058708 DOI: 10.2105/AJPH.2020.305895  0.01
2020 Vijayasarathy C, Zeng Y, Brooks M, Fariss RN, Sieving PA. Genetic rescue of X-linked retinoschisis mouse (Rs1-/y) retina induces quiescence of the retinal microglial inflammatory state following AAV8-RS1 gene transfer and identifies gene networks underlying retinal recovery. Human Gene Therapy. PMID 33019822 DOI: 10.1089/hum.2020.213  0.04
2020 Tranter H, Brooks M, Khan R. Emotional resilience and event centrality mediate posttraumatic growth following adverse childhood experiences. Psychological Trauma : Theory, Research, Practice and Policy. PMID 32881570 DOI: 10.1037/tra0000953  1
2020 Cirrone J, Brooks MD, Bonneau R, Coruzzi GM, Shasha DE. Author Correction: OutPredict: multiple datasets can improve prediction of expression and inference of causality. Scientific Reports. 10: 14141. PMID 32811842 DOI: 10.1038/S41598-020-69883-2  1
2020 Phelan MA, Kruczek K, Wilson JP, Brooks MJ, Drinnan CT, Regent F, Gerstenhaber JA, Swaroop A, Lelkes PI, Li T. Soy protein nanofiber scaffolds for uniform maturation of hiPSC-derived retinal pigment epithelium. Tissue Engineering. Part C, Methods. PMID 32635833 DOI: 10.1089/Ten.Tec.2020.0072  1
2020 Wang L, Kaya KD, Kim S, Brooks MJ, Wang J, Xin Y, Qian J, Swaroop A, Handa JT. Retinal pigment epithelium transcriptome analysis in chronic smoking reveals a suppressed innate immune response and activation of differentiation pathways. Free Radical Biology & Medicine. PMID 32634473 DOI: 10.1016/J.Freeradbiomed.2020.06.004  1
2020 Rawlins B, Brooks M, Khan R. Posttraumatic stress symptoms mediate the relationship between adverse childhood experiences, avoidant personality traits and resilience. Anxiety, Stress, and Coping. 1-12. PMID 32436731 DOI: 10.1080/10615806.2020.1768532  1
2020 Cirrone J, Brooks MD, Bonneau R, Coruzzi GM, Shasha DE. OutPredict: multiple datasets can improve prediction of expression and inference of causality. Scientific Reports. 10: 6804. PMID 32321967 DOI: 10.1038/S41598-020-63347-3  1
2020 Vidal EA, Alvarez JM, Araus V, Riveras E, Brooks M, Krouk G, Ruffel S, Lejay L, Crawford N, Coruzzi GM, Gutiérrez RA. Nitrate 2020: Thirty years from transport to signaling networks. The Plant Cell. PMID 32169959 DOI: 10.1105/Tpc.19.00748  1
2020 Alvarez JM, Schinke AL, Brooks MD, Pasquino A, Leonelli L, Varala K, Safi A, Krouk G, Krapp A, Coruzzi GM. Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade. Nature Communications. 11: 1157. PMID 32123177 DOI: 10.1038/S41467-020-14979-6  1
2019 Esquerdo-Barragán M, Brooks MJ, Toulis V, Swaroop A, Marfany G. Expression of deubiquitinating enzyme genes in the developing mammal retina. Molecular Vision. 25: 800-813. PMID 31819342  1
2019 Kaya KD, Chen HY, Brooks MJ, Kelley RA, Shimada H, Nagashima K, de Val N, Drinnan CT, Gieser L, Kruczek K, Erceg S, Li T, Lukovic D, Adlakha YK, Welby E, et al. Transcriptome-based molecular staging of human stem cell-derived retinal organoids uncovers accelerated photoreceptor differentiation by 9-cis retinal. Molecular Vision. 25: 663-678. PMID 31814692  1
2019 Underwood EC, Klinger RC, Brooks ML. Effects of invasive plants on fire regimes and postfire vegetation diversity in an arid ecosystem. Ecology and Evolution. 9: 12421-12435. PMID 31788187 DOI: 10.1002/Ece3.5650  0.01
2019 Li Y, Brooks M, Yeoh-Wang J, McCoy RM, Rock TM, Pasquino A, Moon CI, Patrick RM, Tanurdzic M, Ruffel S, Widhalm JR, McCombie WR, Coruzzi GM. SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling. Plant Physiology. PMID 31641075 DOI: 10.1104/Pp.19.00682  1
2019 Brooks MJ, Chen HY, Kelley RA, Mondal AK, Nagashima K, De Val N, Li T, Chaitankar V, Swaroop A. Improved Retinal Organoid Differentiation by Modulating Signaling Pathways Revealed by Comparative Transcriptome Analyses with Development In Vivo. Stem Cell Reports. PMID 31631019 DOI: 10.1016/J.Stemcr.2019.09.009  1
2019 Madeira CL, Jog KV, Vanover ET, Brooks MD, Taylor DK, Sierra-Alvarez R, Waidner LA, Spain JC, Krzmarzick MJ, Field JA. Microbial enrichment culture responsible for the complete oxidative biodegradation of 3-amino-1,2,4-triazol-5-one (ATO), the reduced daughter product of the insensitive munitions compound 3-nitro-1,2,4-triazol-5-one (NTO). Environmental Science & Technology. PMID 31553579 DOI: 10.1021/Acs.Est.9B04065  1
2019 Clark CM, Simkin SM, Allen EB, Bowman WD, Belnap J, Brooks ML, Collins SL, Geiser LH, Gilliam FS, Jovan SE, Pardo LH, Schulz BK, Stevens CJ, Suding KN, Throop HL, et al. Potential vulnerability of 348 herbaceous species to atmospheric deposition of nitrogen and sulfur in the United States. Nature Plants. PMID 31263243 DOI: 10.1038/S41477-019-0442-8  0.01
2019 Brooks MD, Cirrone J, Pasquino AV, Alvarez JM, Swift J, Mittal S, Juang CL, Varala K, Gutiérrez RA, Krouk G, Shasha D, Coruzzi GM. Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions. Nature Communications. 10: 1569. PMID 30952851 DOI: 10.1038/S41467-019-09522-1  1
2019 Mileski M, Brooks M, Topinka JB, Hamilton G, Land C, Mitchell T, Mosley B, McClay R. Alarming and/or Alerting Device Effectiveness in Reducing Falls in Long-Term Care (LTC) Facilities? A Systematic Review. Healthcare (Basel, Switzerland). 7. PMID 30934633 DOI: 10.3390/healthcare7010051  1
2019 Mileski M, Brooks M, Kirsch A, Lee F, LeVieux A, Ruiz A. Positive physical and mental outcomes for residents in nursing facilities using music: a systematic review. Clinical Interventions in Aging. 14: 301-319. PMID 30863025 DOI: 10.2147/CIA.S189486  1
2019 Jing X, Emerson M, Masters D, Brooks M, Buskirk J, Abukamail N, Liu C, Cimino JJ, Shubrook J, De Lacalle S, Zhou Y, Patel VL. A visual interactive analytic tool for filtering and summarizing large health data sets coded with hierarchical terminologies (VIADS). Bmc Medical Informatics and Decision Making. 19: 31. PMID 30764811 DOI: 10.1186/S12911-019-0750-Y  0.04
2018 Pisoni R, Kormányos A, Brooks M, Lei Z, Back P, Eich M, Overweg H, Lee Y, Rickhaus P, Watanabe K, Taniguchi T, Imamoglu A, Burkard G, Ihn T, Ensslin K. Interactions and Magnetotransport through Spin-Valley Coupled Landau Levels in Monolayer MoS_{2}. Physical Review Letters. 121: 247701. PMID 30608765 DOI: 10.1103/Physrevlett.121.247701  0.01
2018 Oliveira JRS, Mohamed JS, Myers M, Brooks MJ, Alway SE. Effects of hindlimb suspension and reloading on gastrocnemius and soleus muscle mass and function in geriatric mice. Experimental Gerontology. PMID 30448397 DOI: 10.1016/J.Exger.2018.11.011  1
2018 Fulton LV, Brooks MS. An Evaluation of Alternatives for Providing Care to Veterans. Healthcare (Basel, Switzerland). 6. PMID 30072646 DOI: 10.3390/healthcare6030092  1
2018 Swaroop M, Brooks MJ, Gieser L, Swaroop A, Zheng W. Patient iPSC-derived neural stem cells exhibit phenotypes in concordance with the clinical severity of Mucopolysaccharidosis I. Human Molecular Genetics. PMID 30052969 DOI: 10.1093/Hmg/Ddy259  1
2018 Muzyka VV, Brooks M, Badea TC. Postnatal developmental dynamics of cell type specification genes in Brn3a/Pou4f1 Retinal Ganglion Cells. Neural Development. 13: 15. PMID 29958540 DOI: 10.1186/S13064-018-0110-0  1
2018 Mileski M, Baar Topinka J, Brooks M, Lonidier C, Linker K, Vander Veen K. Sensory and memory stimulation as a means to care for individuals with dementia in long-term care facilities. Clinical Interventions in Aging. 13: 967-974. PMID 29844663 DOI: 10.2147/CIA.S153113  1
2018 Varala K, Marshall-Colón A, Cirrone J, Brooks MD, Pasquino AV, Léran S, Mittal S, Rock TM, Edwards MB, Kim GJ, Ruffel S, McCombie WR, Shasha D, Coruzzi GM. Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants. Proceedings of the National Academy of Sciences of the United States of America. PMID 29769331 DOI: 10.1073/Pnas.1721487115  1
2018 Brooks M, Graham-Kevan N, Robinson S, Lowe M. Trauma characteristics and posttraumatic growth: The mediating role of avoidance coping, intrusive thoughts, and social support. Psychological Trauma : Theory, Research, Practice and Policy. PMID 29723030 DOI: 10.1037/tra0000372  1
2018 Kruse CS, Atkins JM, Baker TD, Gonzales EN, Paul JL, Brooks M. Factors influencing the adoption of telemedicine for treatment of military veterans with post-traumatic stress disorder. Journal of Rehabilitation Medicine. PMID 29700551 DOI: 10.2340/16501977-2302  1
2018 Lim ML, Brooks MD, Boothe MA, Krzmarzick MJ. Novel bacterial diversity is enriched with chloroperoxidase-reacted organic matter under anaerobic conditions. Fems Microbiology Ecology. 94. PMID 29635439 DOI: 10.1093/Femsec/Fiy050  1
2018 Brooks MJ, Hajira A, Mohamed JS, Alway SE. Voluntary wheel running increases satellite cell abundance and improves recovery from disuse in gastrocnemius muscles from mice. Journal of Applied Physiology (Bethesda, Md. : 1985). PMID 29470148 DOI: 10.1152/Japplphysiol.00451.2017  1
2018 McNeice AH, Brooks M, Hanratty CG, Stevenson M, Spratt JC, Walsh SJ. A retrospective study of radiation dose measurements comparing different cath lab X-ray systems in a sample population of patients undergoing percutaneous coronary intervention for chronic total occlusions. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 29411518 DOI: 10.1002/ccd.27541  0.01
2018 Scott Kruse C, Karem P, Shifflett K, Vegi L, Ravi K, Brooks M. Evaluating barriers to adopting telemedicine worldwide: A systematic review. Journal of Telemedicine and Telecare. 24: 4-12. PMID 29320966 DOI: 10.1177/1357633X16674087  1
2017 DiStefano T, Chen HY, Panebianco C, Kaya KD, Brooks MJ, Gieser L, Morgan NY, Pohida T, Swaroop A. Accelerated and Improved Differentiation of Retinal Organoids from Pluripotent Stem Cells in Rotating-Wall Vessel Bioreactors. Stem Cell Reports. PMID 29233554 DOI: 10.1016/J.Stemcr.2017.11.001  1
2017 Hoshino A, Ratnapriya R, Brooks MJ, Chaitankar V, Wilken MS, Zhang C, Starostik MR, Gieser L, La Torre A, Nishio M, Bates O, Walton A, Bermingham-McDonogh O, Glass IA, Wong ROL, et al. Molecular Anatomy of the Developing Human Retina. Developmental Cell. PMID 29233477 DOI: 10.1016/J.Devcel.2017.10.029  1
2017 Mileski M, Scott Kruse C, Brooks M, Haynes C, Collingwood Y, Rodriguez R. Factors Concerning Veterans With Dementia, Their Caregivers, and Coordination of Care: A Systematic Literature Review. Military Medicine. 182: e1904-e1911. PMID 29087860 DOI: 10.7205/MILMED-D-16-00396  1
2017 Blusztein DI, Brooks MJ, Andrews DT. A systematic review and meta-analysis evaluating ischemic conditioning during percutaneous coronary intervention. Future Cardiology. PMID 29076346 DOI: 10.2217/fca-2017-0042  1
2017 Zelinger L, Karakülah G, Chaitankar V, Kim JW, Yang HJ, Brooks MJ, Swaroop A. Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL. Investigative Ophthalmology & Visual Science. 58: 4422-4435. PMID 28863214 DOI: 10.1167/Iovs.17-21805  1
2017 Kruse CS, Krowski N, Rodriguez B, Tran L, Vela J, Brooks M. Telehealth and patient satisfaction: a systematic review and narrative analysis. Bmj Open. 7: e016242. PMID 28775188 DOI: 10.1136/bmjopen-2017-016242  1
2017 Leonelli L, Brooks MD, Niyogi KK. Engineering the lutein epoxide cycle into Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. PMID 28760990 DOI: 10.1073/Pnas.1704373114  1
2017 Fuchs A, de Backer O, Brooks M, de Knegt MC, Bieliauskas G, Yamamoto M, Yanagisawa R, Hayashida K, Søndergaard L, Kofoed KF. Subclinical leaflet thickening and stent frame geometry in self-expanding transcatheter heart valves. Eurointervention : Journal of Europcr in Collaboration With the Working Group On Interventional Cardiology of the European Society of Cardiology. PMID 28741579 DOI: 10.4244/EIJ-D-17-00373  1
2017 Lydersen JM, Collins BM, Brooks ML, Matchett JR, Shive KL, Povak NA, Kane VR, Smith DF. Evidence of fuels management and fire weather influencing fire severity in an extreme fire event. Ecological Applications : a Publication of the Ecological Society of America. PMID 28644577 DOI: 10.1002/Eap.1586  1
2017 Lee SR, Berlow EL, Ostoja SM, Brooks ML, Génin A, Matchett JR, Hart SC. A multi-scale evaluation of pack stock effects on subalpine meadow plant communities in the Sierra Nevada. Plos One. 12: e0178536. PMID 28609464 DOI: 10.1371/Journal.Pone.0178536  1
2017 Sajgo S, Ghinia MG, Brooks M, Kretschmer F, Chuang K, Hiriyanna S, Wu Z, Popescu O, Badea TC. Molecular codes for cell type specification in Brn3 retinal ganglion cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 28465430 DOI: 10.1073/Pnas.1618551114  1
2017 Brooks M, Graham-Kevan N, Lowe M, Robinson S. Rumination, event centrality, and perceived control as predictors of post-traumatic growth and distress: The Cognitive Growth and Stress model. The British Journal of Clinical Psychology. PMID 28464228 DOI: 10.1111/bjc.12138  1
2017 Veleri S, Nellissery J, Mishra B, Manjunath SH, Brooks MJ, Dong L, Nagashima K, Qian H, Gao C, Sergeev YV, Huang XF, Qu J, Lu F, Cideciyan AV, Li T, et al. REEP6 mediates trafficking of a subset of Clathrin-coated vesicles and is critical for rod photoreceptor function and survival. Human Molecular Genetics. PMID 28369466 DOI: 10.1093/Hmg/Ddx111  1
2017 Kruse CS, Soma M, Pulluri D, Nemali NT, Brooks M. The effectiveness of telemedicine in the management of chronic heart disease - a systematic review. Jrsm Open. 8: 2054270416681747. PMID 28321319 DOI: 10.1177/2054270416681747  1
2017 Yu W, Mookherjee S, Chaitankar V, Hiriyanna S, Kim JW, Brooks M, Ataeijannati Y, Sun X, Dong L, Li T, Swaroop A, Wu Z. Nrl knockdown by AAV-delivered CRISPR/Cas9 prevents retinal degeneration in mice. Nature Communications. 8: 14716. PMID 28291770 DOI: 10.1038/Ncomms14716  1
2017 Mileski M, Topinka JB, Lee K, Brooks M, McNeil C, Jackson J. An investigation of quality improvement initiatives in decreasing the rate of avoidable 30-day, skilled nursing facility-to-hospital readmissions: a systematic review. Clinical Interventions in Aging. 12: 213-222. PMID 28182162 DOI: 10.2147/CIA.S123362  1
2016 Kim JW, Yang HJ, Brooks MJ, Zelinger L, Karakülah G, Gotoh N, Boleda A, Gieser L, Giuste F, Whitaker DT, Walton A, Villasmil R, Barb JJ, Munson PJ, Kaya KD, et al. NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors. Cell Reports. 17: 2460-2473. PMID 27880916 DOI: 10.1016/J.Celrep.2016.10.074  1
2016 Chen Y, Brooks MJ, Gieser L, Swaroop A, Palczewski K. Transcriptome Profiling of NIH3T3 Cell Lines Expressing Opsin and the P23H Opsin Mutant Identifies Candidate Drugs for the Treatment of Retinitis Pigmentosa. Pharmacological Research. PMID 27838510 DOI: 10.1016/J.Phrs.2016.10.031  1
2016 Coates PS, Ricca MA, Prochazka BG, Brooks ML, Doherty KE, Kroger T, Blomberg EJ, Hagen CA, Casazza ML. Wildfire, climate, and invasive grass interactions negatively impact an indicator species by reshaping sagebrush ecosystems. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791084 DOI: 10.1073/Pnas.1606898113  0.01
2016 Topinka JB, Nichols J, Brooks M. Service Animals: A New Legal Dimension Within the US Military. U.S. Army Medical Department Journal. 108-11. PMID 27613216  1
2016 Anderson RD, Brooks M. Apical takotsubo syndrome in a patient with metastatic breast carcinoma on novel immunotherapy. International Journal of Cardiology. 222: 760-761. PMID 27521552 DOI: 10.1016/j.ijcard.2016.07.291  1
2016 Rueda EM, Johnson JE, Giddabasappa A, Swaroop A, Brooks MJ, Sigel I, Chaney SY, Fox DA. The cellular and compartmental profile of mouse retinal glycolysis, tricarboxylic acid cycle, oxidative phosphorylation, and ~P transferring kinases. Molecular Vision. 22: 847-85. PMID 27499608  1
2016 Chen Y, Palczewska G, Masuho I, Gao S, Jin H, Dong Z, Gieser L, Brooks MJ, Kiser PD, Kern TS, Martemyanov KA, Swaroop A, Palczewski K. Synergistically acting agonists and antagonists of G protein-coupled receptors prevent photoreceptor cell degeneration. Science Signaling. 9: ra74. PMID 27460988 DOI: 10.1126/Scisignal.Aag0245  1
2016 Kim JW, Yang HJ, Oel AP, Brooks MJ, Jia L, Plachetzki DC, Li W, Allison WT, Swaroop A. Recruitment of Rod Photoreceptors from Short-Wavelength-Sensitive Cones during the Evolution of Nocturnal Vision in Mammals. Developmental Cell. 37: 520-532. PMID 27326930 DOI: 10.1016/J.Devcel.2016.05.023  1
2016 Chaitankar V, Karakülah G, Ratnapriya R, Giuste FO, Brooks MJ, Swaroop A. Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research. Progress in Retinal and Eye Research. PMID 27297499 DOI: 10.1016/J.Preteyeres.2016.06.001  1
2016 Kaewkhaw R, Swaroop M, Homma K, Nakamura J, Brooks M, Kaya KD, Chaitankar V, Michael S, Tawa G, Zou J, Rao M, Zheng W, Cogliati T, Swaroop A. Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines. Investigative Ophthalmology & Visual Science. 57: ORSFl1-ORSFl11. PMID 27116668 DOI: 10.1167/Iovs.15-17639  1
2016 Fritsche LG, Igl W, Bailey JN, Grassmann F, Sengupta S, Bragg-Gresham JL, Burdon KP, Hebbring SJ, Wen C, Gorski M, Kim IK, Cho D, Zack D, Souied E, Scholl HP, ... ... Brooks M, et al. A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants. Nature Genetics. 48: 134-43. PMID 26691988 DOI: 10.1038/Ng.3448  1
2015 Carlino M, Ruparelia N, Thomas G, Brooks M, Uretsky BF, Brilakis ES, Karmpaliotis D, Hanratty C, Walsh S, Spratt J, Colombo A. Modified contrast microinjection technique to facilitate chronic total occlusion recanalization. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 26356491 DOI: 10.1002/ccd.26242  1
2015 Kaewkhaw R, Kaya KD, Brooks M, Homma K, Zou J, Chaitankar V, Rao M, Swaroop A. Transcriptome dynamics of developing photoreceptors in three-dimensional retina cultures recapitulates temporal sequence of human cone and rod differentiation revealing cell surface markers and gene networks. Stem Cells (Dayton, Ohio). PMID 26235913 DOI: 10.1002/Stem.2122  1
2015 Fulton L, Kerr B, Inglis JM, Brooks M, Bastian ND. Evaluating MEDEVAC Force Structure Requirements Using an Updated Army Scenario, Total Army Analysis Admission Data, Monte Carlo Simulation, and Theater Structure. Military Medicine. 180: 780-6. PMID 26126248 DOI: 10.7205/MILMED-D-14-00580  1
2015 Matchett JR, Stark PB, Ostoja SM, Knapp RA, McKenny HC, Brooks ML, Langford WT, Joppa LN, Berlow EL. Detecting the influence of rare stressors on rare species in Yosemite National Park using a novel stratified permutation test. Scientific Reports. 5: 10702. PMID 26031755 DOI: 10.1038/Srep10702  1
2015 De Backer O, Arnous S, Sandholt B, Brooks M, Biasco L, Franzen O, Lönn L, Bech B, Søndergaard L. Safety and efficacy of using the Viabahn endoprosthesis for percutaneous treatment of vascular access complications after transfemoral aortic valve implantation. The American Journal of Cardiology. 115: 1123-9. PMID 25728645 DOI: 10.1016/j.amjcard.2015.01.547  1
2015 Sondergaard L, Brooks M, Ihlemann N, Jonsson A, Holme S, Tang M, Terp K, Quadri A. Transcatheter mitral valve implantation via transapical approach: an early experience. European Journal of Cardio-Thoracic Surgery : Official Journal of the European Association For Cardio-Thoracic Surgery. 48: 873-7; discussion 87. PMID 25653251 DOI: 10.1093/ejcts/ezu546  0.01
2014 De Backer O, Arnous S, Lønborg J, Brooks M, Biasco L, Jönsson A, Franzen OW, Søndergaard L. Recovery from anemia in patients with severe aortic stenosis undergoing transcatheter aortic valve implantation--prevalence, predictors and clinical outcome. Plos One. 9: e114038. PMID 25437191 DOI: 10.1371/journal.pone.0114038  1
2014 Sylak-Glassman EJ, Malnoë A, De Re E, Brooks MD, Fischer AL, Niyogi KK, Fleming GR. Distinct roles of the photosystem II protein PsbS and zeaxanthin in the regulation of light harvesting in plants revealed by fluorescence lifetime snapshots. Proceedings of the National Academy of Sciences of the United States of America. 111: 17498-503. PMID 25422428 DOI: 10.1073/Pnas.1418317111  1
2014 Kim SY, Yang HJ, Chang YS, Kim JW, Brooks M, Chew EY, Wong WT, Fariss RN, Rachel RA, Cogliati T, Qian H, Swaroop A. Deletion of aryl hydrocarbon receptor AHR in mice leads to subretinal accumulation of microglia and RPE atrophy. Investigative Ophthalmology & Visual Science. 55: 6031-40. PMID 25159211 DOI: 10.1167/Iovs.14-15091  1
2014 Onoa B, Schneider AR, Brooks MD, Grob P, Nogales E, Geissler PL, Niyogi KK, Bustamante C. Atomic force microscopy of photosystem II and its unit cell clustering quantitatively delineate the mesoscale variability in Arabidopsis thylakoids. Plos One. 9: e101470. PMID 25007326 DOI: 10.1371/Journal.Pone.0101470  1
2014 Veleri S, Manjunath SH, Fariss RN, May-Simera H, Brooks M, Foskett TA, Gao C, Longo TA, Liu P, Nagashima K, Rachel RA, Li T, Dong L, Swaroop A. Ciliopathy-associated gene Cc2d2a promotes assembly of subdistal appendages on the mother centriole during cilia biogenesis. Nature Communications. 5: 4207. PMID 24947469 DOI: 10.1038/Ncomms5207  1
2014 Ratnapriya R, Zhan X, Fariss RN, Branham KE, Zipprer D, Chakarova CF, Sergeev YV, Campos MM, Othman M, Friedman JS, Maminishkis A, Waseem NH, Brooks M, Rajasimha HK, Edwards AO, et al. Rare and common variants in extracellular matrix gene Fibrillin 2 (FBN2) are associated with macular degeneration. Human Molecular Genetics. 23: 5827-37. PMID 24899048 DOI: 10.1093/Hmg/Ddu276  1
2014 Clausen CH, Brooks MD, Li TD, Grob P, Kemalyan G, Nogales E, Niyogi KK, Fletcher DA. Dynamic mechanical responses of Arabidopsis thylakoid membranes during PSII-specific illumination. Biophysical Journal. 106: 1864-70. PMID 24806918 DOI: 10.1016/J.Bpj.2014.03.016  1
2014 Brooks MA, Harvey RM, Johnson NF, Koutsos EA, Kerley MS. Effect of varying dietary starch and fiber levels and inoculum source (mule deer vs. dairy cow) on simulated rumen fermentation characteristics. Zoo Biology. 33: 110-20. PMID 24395284 DOI: 10.1002/zoo.21113  0.01
2014 Yadav SP, Hao H, Yang HJ, Kautzmann MA, Brooks M, Nellissery J, Klocke B, Seifert M, Swaroop A. The transcription-splicing protein NonO/p54nrb and three NonO-interacting proteins bind to distal enhancer region and augment rhodopsin expression. Human Molecular Genetics. 23: 2132-44. PMID 24301678 DOI: 10.1093/Hmg/Ddt609  1
2013 Brooks MJ, Pattison DA, Teo EP, Price S, Gurvitch R. Amiodarone-induced destructive thyroiditis associated with coronary artery vasospasm and recurrent ventricular fibrillation. European Thyroid Journal. 2: 65-7. PMID 24783040 DOI: 10.1159/000345528  1
2013 Zhan X, Larson DE, Wang C, Koboldt DC, Sergeev YV, Fulton RS, Fulton LL, Fronick CC, Branham KE, Bragg-Gresham J, Jun G, Hu Y, Kang HM, Liu D, Othman M, ... Brooks M, et al. Identification of a rare coding variant in complement 3 associated with age-related macular degeneration. Nature Genetics. 45: 1375-9. PMID 24036949 DOI: 10.1038/Ng.2758  1
2013 Berlow EL, Knapp RA, Ostoja SM, Williams RJ, McKenny H, Matchett JR, Guo Q, Fellers GM, Kleeman P, Brooks ML, Joppa L. A network extension of species occupancy models in a patchy environment applied to the Yosemite Toad (Anaxyrus canorus). Plos One. 8: e72200. PMID 23951296 DOI: 10.1371/Journal.Pone.0072200  1
2013 Brooks MJ, Andrews DT. Molecular mechanisms of ischemic conditioning: translation into patient outcomes. Future Cardiology. 9: 549-68. PMID 23834695 DOI: 10.2217/fca.13.30  1
2013 Brooks MD, Sylak-Glassman EJ, Fleming GR, Niyogi KK. A thioredoxin-like/β-propeller protein maintains the efficiency of light harvesting in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. 110: E2733-E2740. PMID 23818601 DOI: 10.1073/Pnas.1305443110  1
2013 Brooks MJ, Hannan LM, Ng A, Irving L, Aggarwal A. An unusual cause of transient ischemic attack. Canadian Respiratory Journal. 20: 150. PMID 23762880  0.01
2013 Brooks MJ, Grigg L, Mitchell P, Iyer R, Zentner D, Ng AV, Gurvitch R. Percutaneous closure of a giant saphenous vein graft aneurysm with an Amplatzer vascular plug. Jacc. Cardiovascular Interventions. 6: 420-2. PMID 23597610 DOI: 10.1016/j.jcin.2012.10.022  1
2013 Fritsche LG, Chen W, Schu M, Yaspan BL, Yu Y, Thorleifsson G, Zack DJ, Arakawa S, Cipriani V, Ripke S, Igo RP, Buitendijk GH, Sim X, Weeks DE, Guymer RH, ... ... Brooks M, et al. Seven new loci associated with age-related macular degeneration. Nature Genetics. 45: 433-9, 439e1-2. PMID 23455636 DOI: 10.1038/Ng.2578  1
2013 Nasonkin IO, Merbs SL, Lazo K, Oliver VF, Brooks M, Patel K, Enke RA, Nellissery J, Jamrich M, Le YZ, Bharti K, Fariss RN, Rachel RA, Zack DJ, Rodriguez-Boulan EJ, et al. Conditional knockdown of DNA methyltransferase 1 reveals a key role of retinal pigment epithelium integrity in photoreceptor outer segment morphogenesis. Development (Cambridge, England). 140: 1330-41. PMID 23406904 DOI: 10.1242/Dev.086603  1
2013 Brooks MJ, Joshi SB, Grigg L. Ruptured giant major aortopulmonary collateral artery. European Heart Journal. 34: 1766. PMID 23018150 DOI: 10.1093/eurheartj/ehs317  1
2012 Dickison VM, Richmond AM, Abu Irqeba A, Martak JG, Hoge SC, Brooks MJ, Othman MI, Khanna R, Mears AJ, Chowdhury AY, Swaroop A, Ogilvie JM. A role for prenylated rab acceptor 1 in vertebrate photoreceptor development. Bmc Neuroscience. 13: 152. PMID 23241222 DOI: 10.1186/1471-2202-13-152  1
2012 Brooks MJ, Iyer R. Images in clinical medicine. Coronary arteritis. The New England Journal of Medicine. 367: 658. PMID 22894578 DOI: 10.1056/NEJMicm1103097  1
2012 Priya RR, Rajasimha HK, Brooks MJ, Swaroop A. Exome sequencing: capture and sequencing of all human coding regions for disease gene discovery. Methods in Molecular Biology (Clifton, N.J.). 884: 335-51. PMID 22688718 DOI: 10.1007/978-1-61779-848-1_24  1
2012 Brooks MJ, Rajasimha HK, Swaroop A. Retinal transcriptome profiling by directional next-generation sequencing using 100 ng of total RNA. Methods in Molecular Biology (Clifton, N.J.). 884: 319-34. PMID 22688717 DOI: 10.1007/978-1-61779-848-1_23  1
2012 Kandpal RP, Rajasimha HK, Brooks MJ, Nellissery J, Wan J, Qian J, Kern TS, Swaroop A. Transcriptome analysis using next generation sequencing reveals molecular signatures of diabetic retinopathy and efficacy of candidate drugs. Molecular Vision. 18: 1123-46. PMID 22605924  1
2012 Hambright D, Park KY, Brooks M, McKay R, Swaroop A, Nasonkin IO. Long-term survival and differentiation of retinal neurons derived from human embryonic stem cell lines in un-immunosuppressed mouse retina. Molecular Vision. 18: 920-36. PMID 22539871  1
2012 Rachel RA, May-Simera HL, Veleri S, Gotoh N, Choi BY, Murga-Zamalloa C, McIntyre JC, Marek J, Lopez I, Hackett AN, Zhang J, Brooks M, den Hollander AI, Beales PL, Li T, et al. Combining Cep290 and Mkks ciliopathy alleles in mice rescues sensory defects and restores ciliogenesis. The Journal of Clinical Investigation. 122: 1233-45. PMID 22446187 DOI: 10.1172/Jci60981  1
2012 Sharma YV, Cojocaru RI, Ritter LM, Khattree N, Brooks M, Scott A, Swaroop A, Goldberg AF. Protective gene expression changes elicited by an inherited defect in photoreceptor structure. Plos One. 7: e31371. PMID 22363631 DOI: 10.1371/Journal.Pone.0031371  1
2012 Belote J, Fulton LV, Brooks MS. Patient satisfaction as a function of in-house versus contract staffing models in Veterans Affairs community-based outpatient clinics. Military Medicine. 177: 23-6. PMID 22338974  1
2012 Roger JE, Ranganath K, Zhao L, Cojocaru RI, Brooks M, Gotoh N, Veleri S, Hiriyanna A, Rachel RA, Campos MM, Fariss RN, Wong WT, Swaroop A. Preservation of cone photoreceptors after a rapid yet transient degeneration and remodeling in cone-only Nrl-/- mouse retina. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 528-41. PMID 22238088 DOI: 10.1523/Jneurosci.3591-11.2012  1
2012 Fanchiang SS, Cojocaru R, Othman M, Khanna R, Brooks MJ, Smith T, Tang X, Maricic I, Swaroop A, Kumar V. Global expression profiling of peripheral Qa-1-restricted CD8αα+TCRαβ+ regulatory T cells reveals innate-like features: implications for immune-regulatory repertoire. Human Immunology. 73: 214-22. PMID 21889557 DOI: 10.1016/J.Humimm.2011.07.306  1
2011 Brooks MJ, Rajasimha HK, Roger JE, Swaroop A. Next-generation sequencing facilitates quantitative analysis of wild-type and Nrl(-/-) retinal transcriptomes. Molecular Vision. 17: 3034-54. PMID 22162623  1
2011 Sobrin L, Green T, Sim X, Jensen RA, Tai ES, Tay WT, Wang JJ, Mitchell P, Sandholm N, Liu Y, Hietala K, Iyengar SK, Brooks M, Buraczynska M, et al. Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe). Investigative Ophthalmology & Visual Science. 52: 7593-602. PMID 21873659 DOI: 10.1167/Iovs.11-7510  1
2011 Brooks MD, Niyogi KK. Use of a pulse-amplitude modulated chlorophyll fluorometer to study the efficiency of photosynthesis in Arabidopsis plants. Methods in Molecular Biology (Clifton, N.J.). 775: 299-310. PMID 21863450 DOI: 10.1007/978-1-61779-237-3_16  1
2011 Xue W, Cojocaru RI, Dudley VJ, Brooks M, Swaroop A, Sarthy VP. Ciliary neurotrophic factor induces genes associated with inflammation and gliosis in the retina: a gene profiling study of flow-sorted, Müller cells. Plos One. 6: e20326. PMID 21637858 DOI: 10.1371/Journal.Pone.0020326  1
2011 Brooks M, Royse C, Eisen D, Sparks P, Bhagwat K, Royse A. An accidental mass. Lancet (London, England). 377: 1806. PMID 21601711 DOI: 10.1016/S0140-6736(11)60284-5  0.01
2011 Nasonkin IO, Lazo K, Hambright D, Brooks M, Fariss R, Swaroop A. Distinct nuclear localization patterns of DNA methyltransferases in developing and mature mammalian retina. The Journal of Comparative Neurology. 519: 1914-30. PMID 21452232 DOI: 10.1002/Cne.22613  1
2011 Gómez A, Brooks ML, Buhrmester MD, Vázquez A, Jetten J, Swann WB. On the nature of identity fusion: insights into the construct and a new measure. Journal of Personality and Social Psychology. 100: 918-33. PMID 21355659 DOI: 10.1037/A0022642  1
2010 Parapuram SK, Cojocaru RI, Chang JR, Khanna R, Brooks M, Othman M, Zareparsi S, Khan NW, Gotoh N, Cogliati T, Swaroop A. Distinct signature of altered homeostasis in aging rod photoreceptors: implications for retinal diseases. Plos One. 5: e13885. PMID 21079736 DOI: 10.1371/Journal.Pone.0013885  1
2010 Zemach A, Kim MY, Silva P, Rodrigues JA, Dotson B, Brooks MD, Zilberman D. Local DNA hypomethylation activates genes in rice endosperm. Proceedings of the National Academy of Sciences of the United States of America. 107: 18729-34. PMID 20937895 DOI: 10.1073/Pnas.1009695107  1
2010 Friedman JS, Chang B, Krauth DS, Lopez I, Waseem NH, Hurd RE, Feathers KL, Branham KE, Shaw M, Thomas GE, Brooks MJ, Liu C, Bakeri HA, Campos MM, Maubaret C, et al. Loss of lysophosphatidylcholine acyltransferase 1 leads to photoreceptor degeneration in rd11 mice. Proceedings of the National Academy of Sciences of the United States of America. 107: 15523-8. PMID 20713727 DOI: 10.1073/Pnas.1002897107  1
2010 Chen W, Stambolian D, Edwards AO, Branham KE, Othman M, Jakobsdottir J, Tosakulwong N, Pericak-Vance MA, Campochiaro PA, Klein ML, Tan PL, Conley YP, Kanda A, Kopplin L, Li Y, ... ... Brooks M, et al. Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration. Proceedings of the National Academy of Sciences of the United States of America. 107: 7401-6. PMID 20385819 DOI: 10.1073/Pnas.0912702107  1
2010 Brooks MS, Fulton L. Evidence of poorer life-course mental health outcomes among veterans of the Korean War cohort. Aging & Mental Health. 14: 177-83. PMID 20336549 DOI: 10.1080/13607860903046560  1
2009 Jia L, Oh EC, Ng L, Srinivas M, Brooks M, Swaroop A, Forrest D. Retinoid-related orphan nuclear receptor RORbeta is an early-acting factor in rod photoreceptor development. Proceedings of the National Academy of Sciences of the United States of America. 106: 17534-9. PMID 19805139 DOI: 10.1073/Pnas.0902425106  1
2009 Friedman JS, Ray JW, Waseem N, Johnson K, Brooks MJ, Hugosson T, Breuer D, Branham KE, Krauth DS, Bowne SJ, Sullivan LS, Ponjavic V, Gränse L, Khanna R, Trager EH, et al. Mutations in a BTB-Kelch protein, KLHL7, cause autosomal-dominant retinitis pigmentosa. American Journal of Human Genetics. 84: 792-800. PMID 19520207 DOI: 10.1016/J.Ajhg.2009.05.007  1
2009 Chrispell JD, Feathers KL, Kane MA, Kim CY, Brooks M, Khanna R, Kurth I, Hübner CA, Gal A, Mears AJ, Swaroop A, Napoli JL, Sparrow JR, Thompson DA. Rdh12 activity and effects on retinoid processing in the murine retina. The Journal of Biological Chemistry. 284: 21468-77. PMID 19506076 DOI: 10.1074/Jbc.M109.020966  1
2009 Okrent RA, Brooks MD, Wildermuth MC. Arabidopsis GH3.12 (PBS3) conjugates amino acids to 4-substituted benzoates and is inhibited by salicylate. The Journal of Biological Chemistry. 284: 9742-54. PMID 19189963 DOI: 10.1074/Jbc.M806662200  1
2009 Walker QD, Schramm-Sapyta NL, Caster JM, Waller ST, Brooks MP, Kuhn CM. Novelty-induced locomotion is positively associated with cocaine ingestion in adolescent rats; anxiety is correlated in adults. Pharmacology, Biochemistry, and Behavior. 91: 398-408. PMID 18790706 DOI: 10.1016/J.Pbb.2008.08.019  1
2008 Brooks MS, Laditka SB, Laditka JN. Evidence of greater health care needs among older veterans of the Vietnam War. Military Medicine. 173: 715-20. PMID 18751585 DOI: 10.7205/Milmed.173.8.715  1
2008 Brooks MS, Laditka SB, Laditka JN. Long-term effects of military service on mental health among veterans of the Vietnam War era. Military Medicine. 173: 570-5. PMID 18595421 DOI: 10.7205/Milmed.173.6.570  1
2007 Kanda A, Chen W, Othman M, Branham KE, Brooks M, Khanna R, He S, Lyons R, Abecasis GR, Swaroop A. A variant of mitochondrial protein LOC387715/ARMS2, not HTRA1, is strongly associated with age-related macular degeneration. Proceedings of the National Academy of Sciences of the United States of America. 104: 16227-32. PMID 17884985 DOI: 10.1073/Pnas.0703933104  1
2006 Akimoto M, Cheng H, Zhu D, Brzezinski JA, Khanna R, Filippova E, Oh EC, Jing Y, Linares JL, Brooks M, Zareparsi S, Mears AJ, Hero A, Glaser T, Swaroop A. Targeting of GFP to newborn rods by Nrl promoter and temporal expression profiling of flow-sorted photoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 103: 3890-5. PMID 16505381 DOI: 10.1073/Pnas.0508214103  1
2004 Costello AJ, Brooks M, Cole OJ. Anatomical studies of the neurovascular bundle and cavernosal nerves. Bju International. 94: 1071-6. PMID 15541130 DOI: 10.1111/j.1464-410X.2004.05106.x  0.01
2003 Brooks MB, Morley PS, Dargatz DA, Hyatt DR, Salman MD, Akey BL. Survey of antimicrobial susceptibility testing practices of veterinary diagnostic laboratories in the United States. Journal of the American Veterinary Medical Association. 222: 168-73. PMID 12555979 DOI: 10.2460/Javma.2003.222.168  1
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