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Samuel Mondy - Publications

Affiliations: 
INRA, Beaucouzé, Pays de la Loire, France 
Area:
Soul biology, bioinformatics, plant genetics, statistics,
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22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Djemiel C, Dequiedt S, Karimi B, Cottin A, Girier T, El Djoudi Y, Wincker P, Lelièvre M, Mondy S, Chemidlin Prévost-Bouré N, Maron PA, Ranjard L, Terrat S. BIOCOM-PIPE: a new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S and 23S rRNA gene amplicons. Bmc Bioinformatics. 21: 492. PMID 33129268 DOI: 10.1186/s12859-020-03829-3  0.466
2018 Lamouche F, Gully D, Chaumeret A, Nouwen N, Verly C, Pierre O, Sciallano C, Fardoux J, Jeudy C, Szücs A, Mondy S, Salon C, Nagy I, Kereszt A, Dessaux Y, et al. Transcriptomic dissection of Bradyrhizobium sp. strain ORS285 in symbiosis with Aeschynomene spp. inducing different bacteroid morphotypes with contrasted symbiotic efficiency. Environmental Microbiology. PMID 29921018 DOI: 10.1111/1462-2920.14292  0.611
2018 Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, et al. Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. Nature Communications. 9: 310. PMID 29358710 DOI: 10.1038/S41467-017-02235-3  0.5
2017 Mangot JF, Logares R, Sánchez P, Latorre F, Seeleuthner Y, Mondy S, Sieracki ME, Jaillon O, Wincker P, Vargas C, Massana R. Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells. Scientific Reports. 7: 41498. PMID 28128359 DOI: 10.1038/srep41498  0.481
2016 Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury JM, de Vargas C, Sieracki M, Iudicone D, Vaulot D, Wincker P, Jaillon O. Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6: 37900. PMID 27901108 DOI: 10.1038/Srep37900  0.536
2016 Chong TM, Yin WF, Chen JW, Mondy S, Grandclément C, Faure D, Dessaux Y, Chan KG. Comprehensive genomic and phenotypic metal resistance profile of Pseudomonas putida strain S13.1.2 isolated from a vineyard soil. Amb Express. 6: 95. PMID 27730570 DOI: 10.1186/s13568-016-0269-x  0.616
2016 Mhedbi-Hajri N, Yahiaoui N, Mondy S, Hue N, Pélissier F, Faure D, Dessaux Y. Transcriptome analysis revealed that a quorum sensing system regulates the transfer of the pAt megaplasmid in Agrobacterium tumefaciens. Bmc Genomics. 17: 661. PMID 27543103 DOI: 10.1186/s12864-016-3007-5  0.601
2015 Raoul des Essarts Y, Mondy S, Hélias V, Faure D. Genome Sequence of the Potato Plant Pathogen Dickeya dianthicola Strain RNS04.9. Genome Announcements. 3. PMID 26044429 DOI: 10.1128/genomeA.00581-15  0.41
2015 Kwasiborski A, Mondy S, Chong TM, Chan KG, Beury-Cirou A, Faure D. Core genome and plasmidome of the quorum-quenching bacterium Rhodococcus erythropolis. Genetica. 143: 253-61. PMID 25676013 DOI: 10.1007/s10709-015-9827-4  0.317
2015 Cigna J, Raoul des Essarts Y, Mondy S, Hélias V, Beury-Cirou A, Faure D. Draft Genome Sequences of Pseudomonas fluorescens Strains PA4C2 and PA3G8 and Pseudomonas putida PA14H7, Three Biocontrol Bacteria against Dickeya Phytopathogens. Genome Announcements. 3. PMID 25635023 DOI: 10.1128/genomeA.01503-14  0.41
2015 Khayi S, Raoul des Essarts Y, Mondy S, Moumni M, Hélias V, Beury-Cirou A, Faure D. Draft Genome Sequences of the Three Pectobacterium-Antagonistic Bacteria Pseudomonas brassicacearum PP1-210F and PA1G7 and Bacillus simplex BA2H3. Genome Announcements. 3. PMID 25635020 DOI: 10.1128/genomeA.01497-14  0.396
2014 Mondy S, Lenglet A, Beury-Cirou A, Libanga C, Ratet P, Faure D, Dessaux Y. An increasing opine carbon bias in artificial exudation systems and genetically modified plant rhizospheres leads to an increasing reshaping of bacterial populations. Molecular Ecology. 23: 4846-61. PMID 25145455 DOI: 10.1111/mec.12890  0.578
2014 Kwasiborski A, Mondy S, Beury-Cirou A, Faure D. Genome Sequence of the Quorum-Quenching Rhodococcus erythropolis Strain R138. Genome Announcements. 2. PMID 24675862 DOI: 10.1128/genomeA.00224-14  0.353
2014 Delmotte N, Mondy S, Alunni B, Fardoux J, Chaintreuil C, Vorholt JA, Giraud E, Gourion B. A proteomic approach of bradyrhizobium/aeschynomene root and stem symbioses reveals the importance of the fixA locus for symbiosis. International Journal of Molecular Sciences. 15: 3660-70. PMID 24590127 DOI: 10.3390/Ijms15033660  0.308
2014 Khayi S, Mondy S, Beury-Cirou A, Moumni M, Hélias V, Faure D. Genome Sequence of the Emerging Plant Pathogen Dickeya solani Strain RNS 08.23.3.1A. Genome Announcements. 2. PMID 24482527 DOI: 10.1128/genomeA.01270-13  0.376
2013 Lang J, Planamente S, Mondy S, Dessaux Y, Moréra S, Faure D. Concerted transfer of the virulence Ti plasmid and companion At plasmid in the Agrobacterium tumefaciens-induced plant tumour. Molecular Microbiology. 90: 1178-89. PMID 24118167 DOI: 10.1111/mmi.12423  0.617
2013 Mondy S, Lalouche O, Dessaux Y, Faure D. Genome Sequence of the Quorum-Sensing-Signal-Producing Nonpathogen Agrobacterium tumefaciens Strain P4. Genome Announcements. 1. PMID 24092790 DOI: 10.1128/genomeA.00798-13  0.642
2013 Mondy S, Lalouche O, Dessaux Y, Faure D. Genome Sequence of the Quorum-Quenching Agrobacterium tumefaciens Strain WRT31. Genome Announcements. 1. PMID 23969055 DOI: 10.1128/genomeA.00653-13  0.654
2013 Kwasiborski A, Mondy S, Beury-Cirou A, Faure D. Genome Sequence of the Pectobacterium atrosepticum Strain CFBP6276, Causing Blackleg and Soft Rot Diseases on Potato Plants and Tubers. Genome Announcements. 1. PMID 23788545 DOI: 10.1128/genomeA.00374-13  0.42
2013 Hannou N, Mondy S, Planamente S, Moumni M, Llop P, López M, Manceau C, Barny MA, Faure D. Deep sequencing revealed genome-wide single-nucleotide polymorphism and plasmid content of Erwinia amylovora strains isolated in Middle Atlas, Morocco. Research in Microbiology. 164: 815-20. PMID 23770248 DOI: 10.1016/j.resmic.2013.06.003  0.406
2013 Tannières M, Beury-Cirou A, Vigouroux A, Mondy S, Pellissier F, Dessaux Y, Faure D. A Metagenomic Study Highlights Phylogenetic Proximity of Quorum-Quenching and Xenobiotic-Degrading Amidases of the AS-Family Plos One. 8. PMID 23762380 DOI: 10.1371/journal.pone.0065473  0.561
2012 Chong TM, Yin WF, Mondy S, Grandclément C, Dessaux Y, Chan KG. Heavy-metal resistance of a France Vineyard soil bacterium, pseudomonas mendocina strain S5.2, revealed by whole-genome sequencing Journal of Bacteriology. 194: 6366. PMID 23105092 DOI: 10.1128/JB.01702-12  0.62
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