| Year |
Citation |
Score |
| 2020 |
Banerjee R, Weisenhorn E, Schwartz KJ, Myers KS, Glasner JD, Perna NT, Coon JJ, Welch RA, Kiley PJ. Tailoring a Global Iron Regulon to a Uropathogen. Mbio. 11. PMID 32209682 DOI: 10.1128/Mbio.00351-20 |
0.695 |
|
| 2019 |
Ma X, Perna NT, Glasner JD, Hao J, Johnson S, Nasaruddin AS, Charkowski AO, Wu S, Fei Z, Perry KL, Stodghill P, Swingle B. Complete Genome Sequence of Dickeya dianthicola ME23, a Pathogen Causing Blackleg and Soft Rot Diseases of Potato. Microbiology Resource Announcements. 8. PMID 30801063 DOI: 10.1128/MRA.01526-18 |
0.756 |
|
| 2016 |
Burritt NL, Foss NJ, Neeno-Eckwall EC, Church JO, Hilger AM, Hildebrand JA, Warshauer DM, Perna NT, Burritt JB. Sepsis and Hemocyte Loss in Honey Bees (Apis mellifera) Infected with Serratia marcescens Strain Sicaria. Plos One. 11: e0167752. PMID 28002470 DOI: 10.1371/Journal.Pone.0167752 |
0.49 |
|
| 2015 |
Sapountzis P, Gruntjes T, Otani S, Estevez J, da Costa RR, Plunkett G, Perna NT, Poulsen M. The Enterobacterium Trabulsiella odontotermitis Presents Novel Adaptations Related to Its Association with Fungus-Growing Termites. Applied and Environmental Microbiology. 81: 6577-88. PMID 26162887 DOI: 10.1128/Aem.01844-15 |
0.413 |
|
| 2014 |
Ma B, Charkowski AO, Glasner JD, Perna NT. Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning. Bmc Genomics. 15: 508. PMID 24952641 DOI: 10.1186/1471-2164-15-508 |
0.77 |
|
| 2013 |
Chung Y, Perna NT, Ané C. Computing the joint distribution of tree shape and tree distance for gene tree inference and recombination detection. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 10: 1263-74. PMID 24384712 DOI: 10.1109/Tcbb.2013.109 |
0.345 |
|
| 2013 |
Babujee L, Balakrishnan V, Kiley PJ, Glasner JD, Perna NT. Transcriptome changes associated with anaerobic growth in Yersinia intermedia (ATCC29909). Plos One. 8: e76567. PMID 24116118 DOI: 10.1371/Journal.Pone.0076567 |
0.695 |
|
| 2013 |
Baumler DJ, Ma B, Reed JL, Perna NT. Inferring ancient metabolism using ancestral core metabolic models of enterobacteria. Bmc Systems Biology. 7: 46. PMID 23758866 DOI: 10.1186/1752-0509-7-46 |
0.356 |
|
| 2012 |
Broadbent JR, Neeno-Eckwall EC, Stahl B, Tandee K, Cai H, Morovic W, Horvath P, Heidenreich J, Perna NT, Barrangou R, Steele JL. Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation. Bmc Genomics. 13: 533. PMID 23035691 DOI: 10.1186/1471-2164-13-533 |
0.529 |
|
| 2012 |
Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, López Solanilla E, Low D, Moleleki L, Pirhonen M, Pitman A, Perna N, Reverchon S, Rodríguez Palenzuela P, et al. The role of secretion systems and small molecules in soft-rot Enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50: 425-49. PMID 22702350 DOI: 10.1146/Annurev-Phyto-081211-173013 |
0.329 |
|
| 2012 |
Babujee L, Apodaca J, Balakrishnan V, Liss P, Kiley PJ, Charkowski AO, Glasner JD, Perna NT. Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria. Bmc Genomics. 13: 110. PMID 22439737 DOI: 10.1186/1471-2164-13-110 |
0.7 |
|
| 2012 |
Baumler DJ, Banta LM, Hung KF, Schwarz JA, Cabot EL, Glasner JD, Perna NT. Using comparative genomics for inquiry-based learning to dissect virulence of Escherichia coli O157:H7 and Yersinia pestis. Cbe Life Sciences Education. 11: 81-93. PMID 22383620 DOI: 10.1187/Cbe.10-04-0057 |
0.765 |
|
| 2012 |
Rio RV, Symula RE, Wang J, Lohs C, Wu YN, Snyder AK, Bjornson RD, Oshima K, Biehl BS, Perna NT, Hattori M, Aksoy S. Insight into the transmission biology and species-specific functional capabilities of tsetse (Diptera: glossinidae) obligate symbiont Wigglesworthia. Mbio. 3. PMID 22334516 DOI: 10.1128/Mbio.00240-11 |
0.521 |
|
| 2011 |
Hamilton JP, Neeno-Eckwall EC, Adhikari BN, Perna NT, Tisserat N, Leach JE, Lévesque CA, Buell CR. The Comprehensive Phytopathogen Genomics Resource: A web-based resource for data-mining plant pathogen genomes Database. 2011. PMID 22120664 DOI: 10.1093/Database/Bar053 |
0.498 |
|
| 2011 |
Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT. The evolution of metabolic networks of E. coli. Bmc Systems Biology. 5: 182. PMID 22044664 DOI: 10.1186/1752-0509-5-182 |
0.717 |
|
| 2011 |
Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G, San Francisco MJ, Charkowski AO, Py B, Bell K, ... ... Perna NT, et al. Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193: 2076-7. PMID 21217001 DOI: 10.1128/Jb.01513-10 |
0.751 |
|
| 2010 |
Torto-Alalibo T, Collmer CW, Gwinn-Giglio M, Lindeberg M, Meng S, Chibucos MC, Tseng TT, Lomax J, Biehl B, Ireland A, Bird D, Dean RA, Glasner JD, Perna N, Setubal JC, et al. Unifying themes in microbial associations with animal and plant hosts described using the gene ontology. Microbiology and Molecular Biology Reviews : Mmbr. 74: 479-503. PMID 21119014 DOI: 10.1128/Mmbr.00017-10 |
0.72 |
|
| 2010 |
Darling AE, Mau B, Perna NT. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. Plos One. 5: e11147. PMID 20593022 DOI: 10.1371/Journal.Pone.0011147 |
0.694 |
|
| 2010 |
Dufour YS, Wesenberg GE, Tritt AJ, Glasner JD, Perna NT, Mitchell JC, Donohue TJ. chipD: a web tool to design oligonucleotide probes for high-density tiling arrays. Nucleic Acids Research. 38: W321-5. PMID 20529880 DOI: 10.1093/Nar/Gkq517 |
0.715 |
|
| 2010 |
Rodríguez-Palenzuela P, Matas IM, Murillo J, López-Solanilla E, Bardaji L, Pérez-Martínez I, Rodríguez-Moskera ME, Penyalver R, López MM, Quesada JM, Biehl BS, Perna NT, Glasner JD, Cabot EL, Neeno-Eckwall E, et al. Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts. Environmental Microbiology. 12: 1604-20. PMID 20370821 DOI: 10.1111/J.1462-2920.2010.02207.X |
0.781 |
|
| 2010 |
Sebaihia M, Bocsanczy AM, Biehl BS, Quail MA, Perna NT, Glasner JD, DeClerck GA, Cartinhour S, Schneider DJ, Bentley SD, Parkhill J, Beer SV. Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946. Journal of Bacteriology. 192: 2020-1. PMID 20118253 DOI: 10.1128/Jb.00022-10 |
0.563 |
|
| 2009 |
Rissman AI, Mau B, Biehl BS, Darling AE, Glasner JD, Perna NT. Reordering contigs of draft genomes using the Mauve aligner. Bioinformatics (Oxford, England). 25: 2071-3. PMID 19515959 DOI: 10.1093/Bioinformatics/Btp356 |
0.802 |
|
| 2009 |
Zaremba S, Ramos-Santacruz M, Hampton T, Shetty P, Fedorko J, Whitmore J, Greene JM, Perna NT, Glasner JD, Plunkett G, Shaker M, Pot D. Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens. Bmc Bioinformatics. 10: 177. PMID 19515247 DOI: 10.1186/1471-2105-10-177 |
0.681 |
|
| 2009 |
Harris DR, Pollock SV, Wood EA, Goiffon RJ, Klingele AJ, Cabot EL, Schackwitz W, Martin J, Eggington J, Durfee TJ, Middle CM, Norton JE, Popelars MC, Li H, Klugman SA, ... ... Perna NT, et al. Directed evolution of ionizing radiation resistance in Escherichia coli. Journal of Bacteriology. 191: 5240-52. PMID 19502398 DOI: 10.1128/Jb.00502-09 |
0.424 |
|
| 2009 |
Kim HS, Ma B, Perna NT, Charkowski AO. Phylogeny and virulence of naturally occurring type III secretion system-deficient Pectobacterium strains. Applied and Environmental Microbiology. 75: 4539-49. PMID 19411432 DOI: 10.1128/Aem.01336-08 |
0.374 |
|
| 2009 |
Lindeberg M, Biehl BS, Glasner JD, Perna NT, Collmer A, Collmer CW. Gene Ontology annotation highlights shared and divergent pathogenic strategies of type III effector proteins deployed by the plant pathogen Pseudomonas syringae pv tomato DC3000 and animal pathogenic Escherichia coli strains. Bmc Microbiology. 9: S4. PMID 19278552 DOI: 10.1186/1471-2180-9-S1-S4 |
0.769 |
|
| 2008 |
Glasner JD, Marquez-Villavicencio M, Kim HS, Jahn CE, Ma B, Biehl BS, Rissman AI, Mole B, Yi X, Yang CH, Dangl JL, Grant SR, Perna NT, Charkowski AO. Niche-specificity and the variable fraction of the Pectobacterium pan-genome. Molecular Plant-Microbe Interactions : Mpmi. 21: 1549-60. PMID 18986251 DOI: 10.1094/Mpmi-21-12-1549 |
0.483 |
|
| 2008 |
Glasner JD, Plunkett G, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, ... ... Perna NT, et al. Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria. Nucleic Acids Research. 36: D519-23. PMID 17999997 DOI: 10.1093/Nar/Gkm973 |
0.779 |
|
| 2007 |
Ma B, Hibbing ME, Kim HS, Reedy RM, Yedidia I, Breuer J, Breuer J, Glasner JD, Perna NT, Kelman A, Charkowski AO. Host range and molecular phylogenies of the soft rot enterobacterial genera pectobacterium and dickeya. Phytopathology. 97: 1150-63. PMID 18944180 DOI: 10.1094/Phyto-97-9-1150 |
0.711 |
|
| 2007 |
Mayhew GF, Bartholomay LC, Kou HY, Rocheleau TA, Fuchs JF, Aliota MT, Tsao IY, Huang CY, Liu TT, Hsiao KJ, Tsai SF, Yang UC, Perna NT, Cho WL, Christensen BM, et al. Construction and characterization of an expressed sequenced tag library for the mosquito vector Armigeres subalbatus. Bmc Genomics. 8: 462. PMID 18088419 DOI: 10.1186/1471-2164-8-462 |
0.411 |
|
| 2007 |
Darling AE, Treangen TJ, Messeguer X, Perna NT. Analyzing patterns of microbial evolution using the mauve genome alignment system. Methods in Molecular Biology (Clifton, N.J.). 396: 135-52. PMID 18025691 DOI: 10.1007/978-1-59745-515-2_10 |
0.721 |
|
| 2007 |
Greene JM, Plunkett G, Burland V, Glasner J, Cabot E, Anderson B, Neeno-Eckwall E, Qiu Y, Mau B, Rusch M, Liss P, Hampton T, Pot D, Shaker M, Shaull L, ... ... Perna NT, et al. A new asset for pathogen informatics--the Enteropathogen Resource Integration Center (ERIC), an NIAID Bioinformatics Resource Center for Biodefense and Emerging/Re-emerging Infectious Disease. Advances in Experimental Medicine and Biology. 603: 28-42. PMID 17966403 DOI: 10.1007/978-0-387-72124-8_4 |
0.791 |
|
| 2006 |
Mau B, Glasner JD, Darling AE, Perna NT. Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli. Genome Biology. 7: R44. PMID 16737554 DOI: 10.1186/Gb-2006-7-5-R44 |
0.814 |
|
| 2006 |
Anderson BD, Gilson MC, Scott AA, Biehl BS, Glasner JD, Rajashekara G, Splitter GA, Perna NT. CGHScan: finding variable regions using high-density microarray comparative genomic hybridization data. Bmc Genomics. 7: 91. PMID 16638145 DOI: 10.1186/1471-2164-7-91 |
0.775 |
|
| 2006 |
Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G, Rudd KE, Serres MH, et al. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Research. 34: 1-9. PMID 16397293 DOI: 10.1093/Nar/Gkj405 |
0.761 |
|
| 2006 |
Glasner JD, Rusch M, Liss P, Plunkett G, Cabot EL, Darling A, Anderson BD, Infield-Harm P, Gilson MC, Perna NT. ASAP: a resource for annotating, curating, comparing, and disseminating genomic data. Nucleic Acids Research. 34: D41-5. PMID 16381899 DOI: 10.1093/Nar/Gkj164 |
0.816 |
|
| 2006 |
Okinaka Y, Perna NT, Yang S, Keen NT, Yang C. Identification of potential virulence genes in Erwinia chrysanthemi 3937: transposon insertion into plant-upregulated genes Journal of General Plant Pathology. 72: 360-368. DOI: 10.1007/S10327-006-0310-Z |
0.371 |
|
| 2006 |
Beer SV, Bocsanczy AB, Parkhill J, Perna NT. Sequencing the entire genome of Erwinia amylovora Acta Horticulturae. 704: 395-396. |
0.478 |
|
| 2004 |
Yang S, Perna NT, Cooksey DA, Okinaka Y, Lindow SE, Ibekwe AM, Keen NT, Yang CH. Genome-wide identification of plant-upregulated genes of Erwinia chrysanthemi 3937 using a GFP-based IVET leaf array. Molecular Plant-Microbe Interactions : Mpmi. 17: 999-1008. PMID 15384490 DOI: 10.1094/Mpmi.2004.17.9.999 |
0.402 |
|
| 2004 |
Darling ACE, Mau B, Blattner FR, Perna NT. Mauve: Multiple alignment of conserved genomic sequence with rearrangements Genome Research. 14: 1394-1403. PMID 15231754 DOI: 10.1101/Gr.2289704 |
0.55 |
|
| 2004 |
Bartholomay LC, Cho WL, Rocheleau TA, Boyle JP, Beck ET, Fuchs JF, Liss P, Rusch M, Butler KM, Wu RC, Lin SP, Kuo HY, Tsao IY, Huang CY, Liu TT, ... ... Perna NT, et al. Description of the transcriptomes of immune response-activated hemocytes from the mosquito vectors Aedes aegypti and Armigeres subalbatus. Infection and Immunity. 72: 4114-26. PMID 15213157 DOI: 10.1128/Iai.72.7.4114-4126.2004 |
0.45 |
|
| 2004 |
Kudva IT, Griffin RW, Murray M, John M, Perna NT, Barrett TJ, Calderwood SB. Insertions, deletions, and single-nucleotide polymorphisms at rare restriction enzyme sites enhance discriminatory power of polymorphic amplified typing sequences, a novel strain typing system for Escherichia coli O157:H7 Journal of Clinical Microbiology. 42: 2388-2397. PMID 15184409 DOI: 10.1128/Jcm.42.6.2388-2397.2004 |
0.371 |
|
| 2004 |
Darling AE, Mau B, Blattner FR, Perna NT. GRIL: genome rearrangement and inversion locator. Bioinformatics (Oxford, England). 20: 122-4. PMID 14693819 DOI: 10.1093/Bioinformatics/Btg378 |
0.688 |
|
| 2003 |
Lathem WW, Bergsbaken T, Witowski SE, Perna NT, Welch RA. Acquisition of stcE, a C1 esterase inhibitor-specific metalloprotease, during the evolution of Escherichia coli O157:H7. The Journal of Infectious Diseases. 187: 1907-14. PMID 12792867 DOI: 10.1086/374719 |
0.303 |
|
| 2003 |
Wei J, Goldberg MB, Burland V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett G, Rose DJ, Darling A, Mau B, Perna NT, Payne SM, Runyen-Janecky LJ, Zhou S, et al. Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T. Infection and Immunity. 71: 2775-86. PMID 12704152 DOI: 10.1128/Iai.71.5.2775-2786.2003 |
0.743 |
|
| 2003 |
Glasner JD, Liss P, Plunkett G, Darling A, Prasad T, Rusch M, Byrnes A, Gilson M, Biehl B, Blattner FR, Perna NT. ASAP, a systematic annotation package for community analysis of genomes. Nucleic Acids Research. 31: 147-51. PMID 12519969 DOI: 10.1093/Nar/Gkg125 |
0.821 |
|
| 2003 |
Wei J, Goldberg MB, Burland V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett G, Rose DJ, Darling A, Mau B, Perna NT, Payne SM, Runyen-Janecky LJ, Zhou S, et al. Complete Genome Sequence and Comparative Genomics of Shigella flexneri Serotype 2a Strain 2457T Infection and Immunity. 71: 4223-4223. DOI: 10.1128/Iai.71.7.4223.2003 |
0.715 |
|
| 2002 |
Welch RA, Burland V, Plunkett G, Redford P, Roesch P, Rasko D, Buckles EL, Liou SR, Boutin A, Hackett J, Stroud D, Mayhew GF, Rose DJ, Zhou S, Schwartz DC, ... Perna NT, et al. Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 99: 17020-4. PMID 12471157 DOI: 10.1073/Pnas.252529799 |
0.538 |
|
| 2002 |
Zhou S, Deng W, Anantharaman TS, Lim A, Dimalanta ET, Wang J, Wu T, Chunhong T, Creighton R, Kile A, Kvikstad E, Bechner M, Yen G, Garic-Stankovic A, Severin J, ... ... Perna NT, et al. A whole-genome shotgun optical map of Yersinia pestis strain KIM. Applied and Environmental Microbiology. 68: 6321-31. PMID 12450857 DOI: 10.1128/Aem.68.12.6321-6331.2002 |
0.398 |
|
| 2002 |
Torres AG, Giron JA, Perna NT, Burland V, Blattner FR, Avelino-Flores F, Kaper JB. Identification and characterization of lpfABCC'DE, a fimbrial operon of enterohemorrhagic Escherichia coli O157:H7. Infection and Immunity. 70: 5416-27. PMID 12228266 DOI: 10.1128/Iai.70.10.5416-5427.2002 |
0.364 |
|
| 2002 |
Torres AG, Perna NT, Burland V, Ruknudin A, Blattner FR, Kaper JB. Characterization of Cah, a calcium-binding and heat-extractable autotransporter protein of enterohaemorrhagic Escherichia coli. Molecular Microbiology. 45: 951-66. PMID 12180916 DOI: 10.1046/J.1365-2958.2002.03094.X |
0.333 |
|
| 2002 |
Taylor DE, Rooker M, Keelan M, Ng LK, Martin I, Perna NT, Burland NT, Blattner FR. Genomic variability of O islands encoding tellurite resistance in enterohemorrhagic Escherichia coli O157:H7 isolates. Journal of Bacteriology. 184: 4690-8. PMID 12169592 DOI: 10.1128/Jb.184.17.4690-4698.2002 |
0.378 |
|
| 2002 |
Deng W, Burland V, Plunkett G, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B, Zhou S, Schwartz DC, Fetherston JD, Lindler LE, Brubaker RR, Plano GV, et al. Genome sequence of Yersinia pestis KIM. Journal of Bacteriology. 184: 4601-11. PMID 12142430 DOI: 10.1128/Jb.184.16.4601-4611.2002 |
0.571 |
|
| 2002 |
Okinaka Y, Yang CH, Perna NT, Keen NT. Microarray profiling of Erwinia chrysanthemi 3937 genes that are regulated during plant infection. Molecular Plant-Microbe Interactions : Mpmi. 15: 619-29. PMID 12118877 DOI: 10.1094/Mpmi.2002.15.7.619 |
0.376 |
|
| 2002 |
Yang CH, Gavilanes-Ruiz M, Okinaka Y, Vedel R, Berthuy I, Boccara M, Chen JW, Perna NT, Keen NT. hrp genes of Erwinia chrysanthemi 3937 are important virulence factors. Molecular Plant-Microbe Interactions : Mpmi. 15: 472-80. PMID 12036278 DOI: 10.1094/Mpmi.2002.15.5.472 |
0.367 |
|
| 2002 |
Kudva IT, Evans PS, Perna NT, Barrett TJ, DeCastro GJ, Ausubel FM, Blattner FR, Calderwood SB. Polymorphic amplified typing sequences provide a novel approach to Escherichia coli O157:H7 strain typing. Journal of Clinical Microbiology. 40: 1152-9. PMID 11923324 DOI: 10.1128/Jcm.40.4.1152-1159.2002 |
0.401 |
|
| 2002 |
Kudva IT, Evans PS, Perna NT, Barrett TJ, Ausubel FM, Blattner FR, Calderwood SB. Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, not single-nucleotide polymorphisms. Journal of Bacteriology. 184: 1873-9. PMID 11889093 DOI: 10.1128/Jb.184.7.1873-1879.2002 |
0.39 |
|
| 2002 |
Heimer SR, Welch RA, Perna NT, Pósfai G, Evans PS, Kaper JB, Blattner FR, Mobley HL. Urease of enterohemorrhagic Escherichia coli: evidence for regulation by fur and a trans-acting factor. Infection and Immunity. 70: 1027-31. PMID 11796646 DOI: 10.1128/Iai.70.2.1027-1031.2002 |
0.385 |
|
| 2001 |
Lim A, Dimalanta ET, Potamousis KD, Yen G, Apodoca J, Tao C, Lin J, Qi R, Skiadas J, Ramanathan A, Perna NT, Plunkett G, Burland V, Mau B, Hackett J, et al. Shotgun optical maps of the whole Escherichia coli O157:H7 genome. Genome Research. 11: 1584-93. PMID 11544203 DOI: 10.1101/Gr.172101 |
0.418 |
|
| 2001 |
Perna NT, Plunkett G, Burland V, Mau B, Glasner JD, Rose DJ, Mayhew GF, Evans PS, Gregor J, Kirkpatrick HA, Pósfai G, Hackett J, Klink S, Boutin A, Shao Y, et al. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature. 409: 529-33. PMID 11206551 DOI: 10.1038/35054089 |
0.457 |
|
| 2001 |
Perna NT, Plunkett G, Burland V, Mau B, Glasner JD, Rose DJ, Mayhew GF, Evans PS, Gregor J, Kirkpatrick HA, Pósfai G, Hackett J, Klink S, Boutin A, Shao Y, et al. erratum Genome sequence of enterohaemorrhagic Escherichia coli 0157:H7 Nature. 410: 240-240. DOI: 10.1038/35065664 |
0.507 |
|
| 2000 |
Ffrench-Constant RH, Waterfield N, Burland V, Perna NT, Daborn PJ, Bowen D, Blattner FR. A genomic sample sequence of the entomopathogenic bacterium Photorhabdus luminescens W14: potential implications for virulence. Applied and Environmental Microbiology. 66: 3310-29. PMID 10919786 DOI: 10.1128/Aem.66.8.3310-3329.2000 |
0.523 |
|
| 1998 |
Burland V, Shao Y, Perna NT, Plunkett G, Sofia HJ, Blattner FR. The complete DNA sequence and analysis of the large virulence plasmid of Escherichia coli O157:H7 Nucleic Acids Research. 26: 4196-4204. PMID 9722640 DOI: 10.1093/Nar/26.18.4196 |
0.442 |
|
| 1998 |
Perna NT, Mayhew GF, Pósfai G, Elliott S, Donnenberg MS, Kaper JB, Blattner FR. Molecular evolution of a pathogenicity island from enterohemorrhagic Escherichia coli O157:H7 Infection and Immunity. 66: 3810-3817. PMID 9673266 DOI: 10.1128/Iai.66.8.3810-3817.1998 |
0.434 |
|
| 1997 |
Blattner FR, Plunkett G, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, et al. The complete genome sequence of Escherichia coli K-12 Science. 277: 1453-1462. PMID 9278503 DOI: 10.1126/Science.277.5331.1453 |
0.534 |
|
| 1996 |
Perna NT, Kocher TD. Mitochondrial DNA: molecular fossils in the nucleus. Current Biology : Cb. 6: 128-9. PMID 8673455 DOI: 10.1016/S0960-9822(02)00441-4 |
0.531 |
|
| 1995 |
Perna NT, Kocher TD. Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. Journal of Molecular Evolution. 41: 353-8. PMID 7563121 DOI: 10.1007/Bf00186547 |
0.538 |
|
| 1995 |
Perna N, Kocher T. Unequal Base Frequencies and the Estimation of Substitution Rates Molecular Biology and Evolution. 12: 359-359. DOI: 10.1093/Oxfordjournals.Molbev.A040211 |
0.383 |
|
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