Seung Yon Rhee - Related publications

Carnegie Institution for Science, USA 
systems biology, plant biology, metabolism
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Wang B, Peng H, Wu W, Yang B, Chen Y, Xu F, Peng Y, Qin Y, Fu P, Lu J. Genomic insights into biocontrol potential of LJBS06. 3 Biotech. 11: 458. PMID 34692367 DOI: 10.1007/s13205-021-03000-6   
2021 Han S, Jiao Z, Niu MX, Yu X, Huang M, Liu C, Wang HL, Zhou Y, Mao W, Wang X, Yin W, Xia X. Genome-Wide Comprehensive Analysis of the Gene Family in . International Journal of Molecular Sciences. 22. PMID 34830215 DOI: 10.3390/ijms222212336   
2021 Singh S, Chhapekar SS, Ma Y, Rameneni JJ, Oh SH, Kim J, Lim YP, Choi SR. Genome-Wide Identification, Evolution, and Comparative Analysis of B-Box Genes in , , and and Their Expression Profiling in in Response to Multiple Hormones and Abiotic Stresses. International Journal of Molecular Sciences. 22. PMID 34638707 DOI: 10.3390/ijms221910367   
2021 Schmitz RJ, Marand AP, Zhang X, Mosher RA, Turck F, Chen X, Axtell MJ, Zhong X, Brady SM, Megraw M, Meyers BC. Quality control and evaluation of plant epigenomics data. The Plant Cell. PMID 34648025 DOI: 10.1093/plcell/koab255   
2021 Cantó-Pastor A, Mason GA, Brady SM, Provart NJ. Arabidopsis bioinformatics: tools and strategies. The Plant Journal : For Cell and Molecular Biology. PMID 34695270 DOI: 10.1111/tpj.15547   
2021 Yu X, Zhong S, Yang H, Chen C, Chen W, Yang H, Guan J, Fu P, Tan F, Ren T, Shen J, Zhang M, Luo P. Identification and Characterization of Resistance Genes in . Frontiers in Plant Science. 12: 758559. PMID 34777439 DOI: 10.3389/fpls.2021.758559   
2021 Chiurazzi MJ, Nørrevang AF, García P, Cerdán PD, Palmgren MB, Wenkel S. Controlling flowering of Medicago sativa (alfalfa) by inducing dominant mutations. Journal of Integrative Plant Biology. PMID 34761872 DOI: 10.1111/jipb.13186   
2021 Ramakrishnan M, Satish L, Kalendar R, Narayanan M, Kandasamy S, Sharma A, Emamverdian A, Wei Q, Zhou M. The Dynamism of Transposon Methylation for Plant Development and Stress Adaptation. International Journal of Molecular Sciences. 22. PMID 34768817 DOI: 10.3390/ijms222111387   
2021 Song T, Zhou M, Yuan Y, Yu J, Cai H, Li J, Chen Y, Bai Y, Zhou G, Cui G. Chromosome-Scale Reference Genome of : A New Resource for Amphicarpic Plants Research and Complex Flowering Pattern. Frontiers in Plant Science. 12: 770660. PMID 34868169 DOI: 10.3389/fpls.2021.770660   
2021 Wan JN, Li Y, Guo T, Ji GY, Luo SZ, Ji KP, Cao Y, Tan Q, Bao DP, Yang RH. Whole-Genome and Transcriptome Sequencing of Reveals Its Associated Ectomycorrhizal Niche and Conserved Pathways Involved in Fruiting Body Development. Frontiers in Microbiology. 12: 732458. PMID 34659161 DOI: 10.3389/fmicb.2021.732458   
2021 Iqbal Qureshi AM, Sofi MU, Dar NA, Khan MH, Mahdi SS, Dar ZA, Bangroo S, El-Serehy HA, Hefft DI, Popescu SM. Insilco identification and characterization of superoxide dismutase gene family in . Saudi Journal of Biological Sciences. 28: 5526-5537. PMID 34588862 DOI: 10.1016/j.sjbs.2021.08.009   
2021 Bakkali M, Martín-Blázquez R, Ruiz-Estévez M, Garrido-Ramos MA. De Novo Sporophyte Transcriptome Assembly and Functional Annotation in the Endangered Fern Species (Willd.) G. Kunkel. Genes. 12. PMID 34208974 DOI: 10.3390/genes12071017   
2021 Matsuo K. Evaluation of methods for plant genomic DNA sequence analysis without DNA and PCR product purification. Plant Science : An International Journal of Experimental Plant Biology. 312: 111023. PMID 34620428 DOI: 10.1016/j.plantsci.2021.111023   
2021 Nie G, Yang Z, He J, Liu A, Chen J, Wang S, Wang X, Feng G, Li D, Peng Y, Huang L, Zhang X. Genome-Wide Investigation of the NAC Transcription Factor Family in and Expression Analysis Under Various Abiotic Stress. Frontiers in Plant Science. 12: 766550. PMID 34804100 DOI: 10.3389/fpls.2021.766550   
2021 Wu H, Hu Q, Ai F, Zhang J, Kang M, Lin H, Xu Z, Dong G, Ma T, Liu J. A chromosome-level genome assembly for the wild kiwifruit Actinidia kolomikta provides insights into canker resistance and fruit development. Plant Biotechnology Journal. PMID 34786806 DOI: 10.1111/pbi.13748   
2021 Islam MA, Rahman MM, Rahman MM, Jin X, Sun L, Zhao K, Wang S, Sikdar A, Noor H, Jeon JS, Zhang W, Sun D. In Silico and Transcription Analysis of Trehalose-6-phosphate Phosphatase Gene Family of Wheat: Trehalose Synthesis Genes Contribute to Salinity, Drought Stress and Leaf Senescence. Genes. 12. PMID 34828258 DOI: 10.3390/genes12111652   
2021 Lawrenson T, Hinchliffe A, Clarke M, Morgan Y, Harwood W. Gene Targeting in Barley Using Cas9 With and Without Geminiviral Replicons. Frontiers in Genome Editing. 3: 663380. PMID 34713258 DOI: 10.3389/fgeed.2021.663380   
2021 Sun Y, Shang L, Zhu QH, Fan L, Guo L. Twenty years of plant genome sequencing: achievements and challenges. Trends in Plant Science. PMID 34782248 DOI: 10.1016/j.tplants.2021.10.006   
2021 Chakraborty A, Mahajan S, Jaiswal SK, Sharma VK. Genome sequencing of turmeric provides evolutionary insights into its medicinal properties. Communications Biology. 4: 1193. PMID 34654884 DOI: 10.1038/s42003-021-02720-y   
2021 Young Chae G, Hong WJ, Jeong Jang M, Jung KH, Kim S. Recurrent mutations promote widespread structural and functional divergence of MULE-derived genes in plants. Nucleic Acids Research. PMID 34725701 DOI: 10.1093/nar/gkab932   
2021 Liang J, An T, Zhu JX, Chen S, Zhu JH, Peters RJ, Yu R, Zi J. Mining of the Genome Leads to Identification of a Biosynthetic Gene Cluster for Fungicidal Sesquiterpenes. Journal of Natural Products. PMID 34644092 DOI: 10.1021/acs.jnatprod.1c00588   
2021 Giovannini A, Laura M, Nesi B, Savona M, Cardi T. Genes and genome editing tools for breeding desirable phenotypes in ornamentals. Plant Cell Reports. 40: 461-478. PMID 33388891 DOI: 10.1007/s00299-020-02632-x   
2021 Li X, Cai K, Pei X, Li Y, Hu Y, Meng F, Song X, Tigabu M, Ding C, Zhao X. Genome-Wide Identification of NAC Transcription Factor Family in and Their Expression Analysis during the Fruit Development and Ripening. International Journal of Molecular Sciences. 22. PMID 34830294 DOI: 10.3390/ijms222212414   
2021 Mohanasundaram B, Bhide AJ, Palit S, Chaturvedi G, Lingwan M, Masakapalli SK, Banerjee AK. The unique bryophyte-specific repeat-containing protein SHORT-LEAF regulates gametophore development in moss. Plant Physiology. 187: 203-217. PMID 34618137 DOI: 10.1093/plphys/kiab261   
2021 Paul A, Srivastava AP, Subrahmanya S, Shen G, Mishra N. In-silico genome wide analysis of Mitogen activated protein kinase kinase kinase gene family in C. sinensis. Plos One. 16: e0258657. PMID 34735479 DOI: 10.1371/journal.pone.0258657   
2021 Paul A, Srivastava AP, Subrahmanya S, Shen G, Mishra N. In-silico genome wide analysis of Mitogen activated protein kinase kinase kinase gene family in C. sinensis. Plos One. 16: e0258657. PMID 34735479 DOI: 10.1371/journal.pone.0258657   
2021 Awan F, Ali MM, Hamid M, Awan MH, Mushtaq MH, Kalsoom S, Ijaz M, Mehmood K, Liu Y. Epi-Gene: An R-Package for Easy Pan-Genome Analysis. Biomed Research International. 2021: 5585586. PMID 34595238 DOI: 10.1155/2021/5585586   
2021 Jha V, Purohit H, Dafale NA. Revealing the potential of PVN-1 for plant beneficial attributes by genome sequencing and analysis. 3 Biotech. 11: 473. PMID 34777930 DOI: 10.1007/s13205-021-03020-2   
2021 Manzoor MA, Sabir IA, Shah IH, Wang H, Yu Z, Rasool F, Mazhar MZ, Younas S, Abdullah M, Cai Y. Comprehensive Comparative Analysis of the GATA Transcription Factors in Four Rosaceae Species and Phytohormonal Response in Chinese Pear () Fruit. International Journal of Molecular Sciences. 22. PMID 34830372 DOI: 10.3390/ijms222212492   
2021 Aleem M, Riaz A, Raza Q, Aleem M, Aslam M, Kong K, Atif RM, Kashif M, Bhat JA, Zhao T. Genome-wide characterization and functional analysis of class III peroxidase gene family in soybean reveal regulatory roles of GsPOD40 in drought tolerance. Genomics. PMID 34813918 DOI: 10.1016/j.ygeno.2021.11.016   
2021 Zhang Z, Yu S, Li J, Zhu Y, Jiang S, Xia H, Zhou Y, Sun D, Liu M, Li C, Zhu Y, Ruan Y, Dong X. Epigenetic modifications potentially controlling the allelic expression of imprinted genes in sunflower endosperm. Bmc Plant Biology. 21: 570. PMID 34863098 DOI: 10.1186/s12870-021-03344-4   
2021 Song JM, Zhang Y, Zhou ZW, Lu S, Ma W, Lu C, Chen LL, Guo L. Oil plant genomes: current state of the science. Journal of Experimental Botany. PMID 34727176 DOI: 10.1093/jxb/erab472   
2021 Singh A, Schermann G, Reislöhner S, Kellner N, Hurt E, Brunner M. Global Transcriptome Characterization and Assembly of the Thermophilic Ascomycete . Genes. 12. PMID 34680944 DOI: 10.3390/genes12101549   
2021 Teng Y, Yang L, Zhang Y. The complete chloroplast genome of (Willd.) Ormerod. Mitochondrial Dna. Part B, Resources. 6: 3388-3390. PMID 34790871 DOI: 10.1080/23802359.2021.1996293   
2021 Fang H, Knight JC. Priority index: database of genetic targets in immune-mediated disease. Nucleic Acids Research. PMID 34751399 DOI: 10.1093/nar/gkab994   
2021 Tian Z, Du Y, Yang F, Zhao J, Liu S, Zhang D, Long CA. Chromosome Genome Sequencing and Comparative Transcriptome-Based Analyses of 34-9 Unveil the Potential Biocontrol Mechanisms Against Citrus Green Mold. Frontiers in Microbiology. 12: 752529. PMID 34858366 DOI: 10.3389/fmicb.2021.752529   
2021 Yang X, Gao S, Guo L, Wang B, Jia Y, Zhou J, Che Y, Jia P, Lin J, Xu T, Sun J, Ye K. Three chromosome-scale Papaver genomes reveal punctuated patchwork evolution of the morphinan and noscapine biosynthesis pathway. Nature Communications. 12: 6030. PMID 34654815 DOI: 10.1038/s41467-021-26330-8   
2021 Nian L, Zhang X, Yi X, Liu X, Ain NU, Yang Y, Li X, Haider FU, Zhu X. Genome-wide identification of ABA receptor PYL/RCAR gene family and their response to cold stress in L. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 27: 1979-1995. PMID 34629773 DOI: 10.1007/s12298-021-01066-3   
2021 Zhou Q, Jiao L, Li W, Hu Z, Li Y, Zhang H, Yang M, Xu L, Yan Y. A Novel Cre/-Based Genetic Tool for Repeated, Targeted and Markerless Gene Integration in . International Journal of Molecular Sciences. 22. PMID 34639080 DOI: 10.3390/ijms221910739   
2021 Senthamizhan V, Ravindran B, Raman K. NetGenes: A Database of Essential Genes Predicted Using Features From Interaction Networks. Frontiers in Genetics. 12: 722198. PMID 34630517 DOI: 10.3389/fgene.2021.722198   
2021 Di Sera T, Velinder M, Ward A, Qiao Y, Georges S, Miller C, Pitman A, Richards W, Ekawade A, Viskochil D, Carey JC, Pace L, Bale J, Clardy SL, Andrews A, et al. Gene.iobio: an interactive web tool for versatile, clinically-driven variant interrogation and prioritization. Scientific Reports. 11: 20307. PMID 34645894 DOI: 10.1038/s41598-021-99752-5   
2021 Wu T, Zhong Y, Chen M, Wu B, Wang T, Jiang B, Zhong G. Analysis of CcGASA family members in Citrus clementina (Hort. ex Tan.) by a genome-wide approach. Bmc Plant Biology. 21: 565. PMID 34852791 DOI: 10.1186/s12870-021-03326-6   
2021 Deng X, Shi B, Ye Z, Huang M, Chen R, Cai Y, Kuang Z, Sun X, Bian G, Deng Z, Liu T. Systematic identification of Ocimum sanctum sesquiterpenoid synthases and (-)-eremophilene overproduction in engineered yeast. Metabolic Engineering. PMID 34781019 DOI: 10.1016/j.ymben.2021.11.005   
2021 Sun J, Wang Y, Garran TA, Qiao P, Wang M, Yuan Q, Guo L, Huang L. Heterogeneous Genetic Diversity Estimation of a Promising Domestication Medicinal Motherwort Based on Chloroplast Genome Resources. Frontiers in Genetics. 12: 721022. PMID 34603384 DOI: 10.3389/fgene.2021.721022   
2021 Zeng Q, Xie J, Li Y, Gao T, Zhang X, Wang Q. Comprehensive Genomic Analysis of the Endophytic Strain GLB197, a Potential Biocontrol Agent of Grape Downy Mildew. Frontiers in Genetics. 12: 729603. PMID 34646305 DOI: 10.3389/fgene.2021.729603   
2021 Williams AM, Itgen MW, Broz AK, Carter OG, Sloan DB. Long-read transcriptome and other genomic resources for the angiosperm Silene noctiflora. G3 (Bethesda, Md.). 11. PMID 34849814 DOI: 10.1093/g3journal/jkab189   
2021 Yocca AE, Edger PP. Current status and future perspectives on the evolution of cis-regulatory elements in plants. Current Opinion in Plant Biology. 65: 102139. PMID 34837823 DOI: 10.1016/j.pbi.2021.102139   
2021 Wu LX, Wang YH, Gong X. Characterization of the complete chloroplast genome of (Cycadaceae), an endemic species in the red river region of China. Mitochondrial Dna. Part B, Resources. 6: 3513-3514. PMID 34869896 DOI: 10.1080/23802359.2021.2005484   
2021 Wei F, Wang D, Fan S, Shi J, Cai X, Li Y, Ma Y, Wen Y, Feng J. Complete Genome Sequence Resource for Causing Crown Infection Pockets in Strawberry. Molecular Plant-Microbe Interactions : Mpmi. PMID 34645282 DOI: 10.1094/MPMI-05-21-0123-A   
2021 Di P, Wang P, Yan M, Han P, Huang X, Yin L, Yan Y, Xu Y, Wang Y. Genome-wide characterization and analysis of WRKY transcription factors in Panax ginseng. Bmc Genomics. 22: 834. PMID 34794386 DOI: 10.1186/s12864-021-08145-5