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Jinliang Yang - Publications

Affiliations: 
2017- Agronomy and Horticulture The University of Nebraska - Lincoln, Lincoln, NE 
Area:
Plant quantitative genetics and statistical genomics
Website:
https://jyanglab.com/
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zou Y, Wang J, Peng D, Zhang X, Tembrock LR, Yang J, Zhao J, Liao H, Wu Z. Multi-integrated genomic data for Passiflora foetida provides insights into genome size evolution and floral development in Passiflora. Molecular Horticulture. 3: 27. PMID 38105261 DOI: 10.1186/s43897-023-00076-x  0.393
2023 Sun S, Wang B, Li C, Xu G, Yang J, Hufford MB, Ross-Ibarra J, Wang H, Wang L. Unraveling prevalence and effects of deleterious mutations in maize elite lines across decades of modern breeding. Molecular Biology and Evolution. PMID 37494285 DOI: 10.1093/molbev/msad170  0.717
2023 Hartwig T, Banf M, Prietsch GP, Zhu JY, Mora-Ramírez I, Schippers JHM, Snodgrass SJ, Seetharam AS, Huettel B, Kolkman JM, Yang J, Engelhorn J, Wang ZY. Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize. Genome Biology. 24: 108. PMID 37158941 DOI: 10.1186/s13059-023-02909-w  0.378
2023 Delen SP, Xu G, Velazquez-Perfecto J, Yang J. Estimating the genetic parameters of yield-related traits under different nitrogen conditions in maize. Genetics. PMID 36723989 DOI: 10.1093/genetics/iyad012  0.32
2023 Grzybowski MW, Mural RV, Xu G, Turkus J, Yang J, Schnable JC. A Common Resequencing-Based Genetic Marker Dataset for Global Maize Diversity. The Plant Journal : For Cell and Molecular Biology. PMID 36705476 DOI: 10.1111/tpj.16123  0.431
2022 Liao X, Ye Y, Zhang X, Peng D, Hou M, Fu G, Tan J, Zhao J, Jiang R, Xu Y, Liu J, Yang J, Liu W, Tembrock LR, Zhu G, et al. The genomic and bulked segregant analysis of revealed its diverse bract pigmentation. Abiotech. 3: 178-196. PMID 36304840 DOI: 10.1007/s42994-022-00081-6  0.331
2022 Li D, Bai D, Tian Y, Li YH, Zhao C, Wang Q, Guo S, Gu Y, Luan X, Wang R, Yang J, Hawkesford MJ, Schnable JC, Jin X, Qiu LJ. Time Series Canopy Phenotyping Enables the Identification of Genetic Variants Controlling Dynamic Phenotypes in Soybean. Journal of Integrative Plant Biology. PMID 36218273 DOI: 10.1111/jipb.13380  0.691
2022 Deng S, Meier MA, Caddell D, Yang J, Coleman-Derr D. Plant Microbiome-Based Genome-Wide Association Studies. Methods in Molecular Biology (Clifton, N.J.). 2481: 353-367. PMID 35641774 DOI: 10.1007/978-1-0716-2237-7_20  0.314
2022 Yang Z, Xu G, Zhang Q, Obata T, Yang J. Genome-wide mediation analysis: an empirical study to connect phenotype with genotype via intermediate transcriptomic data in maize. Genetics. PMID 35460234 DOI: 10.1093/genetics/iyac057  0.412
2021 Samayoa LF, Olukolu BA, Yang CJ, Chen Q, Stetter MG, York AM, Sanchez-Gonzalez JJ, Glaubitz JC, Bradbury PJ, Romay MC, Sun Q, Yang J, Ross-Ibarra J, Buckler ES, Doebley JF, et al. Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte. Plos Genetics. 17: e1009797. PMID 34928949 DOI: 10.1371/journal.pgen.1009797  0.779
2021 Yang J, Mezmouk S, Baumgarten A, Buckler ES, Guill KE, McMullen MD, Mumm RH, Ross-Ibarra J. Correction: Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize. Plos Genetics. 17: e1009825. PMID 34582434 DOI: 10.1371/journal.pgen.1009825  0.742
2021 Deng S, Caddell DF, Xu G, Dahlen L, Washington L, Yang J, Coleman-Derr D. Genome wide association study reveals plant loci controlling heritability of the rhizosphere microbiome. The Isme Journal. PMID 33980999 DOI: 10.1038/s41396-021-00993-z  0.375
2020 Xu G, Lyu J, Li Q, Liu H, Wang D, Zhang M, Springer NM, Ross-Ibarra J, Yang J. Evolutionary and functional genomics of DNA methylation in maize domestication and improvement. Nature Communications. 11: 5539. PMID 33139747 DOI: 10.1038/s41467-020-19333-4  0.615
2020 Yang J, Wang W, Chen Z, Lu S, Yang F, Bi Z, Bao L, Mo F, Li X, Huang Y, Hong W, Yang Y, Zhao Y, Ye F, Lin S, ... ... Yang J, et al. A vaccine targeting the RBD of the S protein of SARS-CoV-2 induces protective immunity. Nature. PMID 32726802 DOI: 10.1038/s41586-020-2599-8  0.685
2019 Liu H, Wang Q, Chen M, Ding Y, Yang X, Liu J, Li X, Zhou C, Tian Q, Lu Y, Fan D, Shi J, Zhang L, Kang C, Sun M, ... ... Yang J, et al. Genome-wide identification and analysis of heterotic loci in three maize hybrids. Plant Biotechnology Journal. PMID 31199059 DOI: 10.1111/Pbi.13186  0.521
2018 Miao C, Yang J, Schnable JC. Optimizing the identification of causal variants across varying genetic architectures in crops. Plant Biotechnology Journal. PMID 30320953 DOI: 10.1111/Pbi.13023  0.495
2018 Yang J, Yeh CE, Kastoori Ramamurthy R, Qi X, Fernando RL, Dekkers JCM, Garrick DJ, Nettleton D, Schnable PS. Empirical Comparisons of Different Statistical Models To Identify and Validate Kernel Row Number-Associated Variants from Structured Multi-parent Mapping Populations of Maize. G3 (Bethesda, Md.). PMID 30213868 DOI: 10.1534/G3.118.200636  0.647
2018 Miao C, Fang J, Li D, Liang P, Zhang X, Yang J, Schnable JC, Tang H. Genotype-Corrector: improved genotype calls for genetic mapping in F and RIL populations. Scientific Reports. 8: 10088. PMID 29973633 DOI: 10.1038/S41598-018-28294-0  0.71
2018 Liang Z, Gupta SK, Yeh CT, Zhang Y, Ngu DW, Kumar R, Patil HT, Mungra KD, Yadav DV, Rathore A, Srivastava RK, Gupta R, Yang J, Varshney RK, Schnable PS, et al. Phenotypic Data from Inbred Parents Can Improve Genomic Prediction in Pearl Millet Hybrids. G3 (Bethesda, Md.). PMID 29794163 DOI: 10.1534/G3.118.200242  0.627
2018 Bilinski P, Albert PS, Berg JJ, Birchler JA, Grote MN, Lorant A, Quezada J, Swarts K, Yang J, Ross-Ibarra J. Parallel altitudinal clines reveal trends in adaptive evolution of genome size in Zea mays. Plos Genetics. 14: e1007162. PMID 29746459 DOI: 10.1371/Journal.Pgen.1007162  0.767
2018 Bezrutczyk M, Hartwig T, Horshman M, Char SN, Yang J, Yang B, Frommer WB, Sosso D. Impaired phloem loading in zmsweet13a,b,c sucrose transporter triple knock-out mutants in Zea mays. The New Phytologist. PMID 29451311 DOI: 10.1111/Nph.15021  0.362
2017 Lin HY, Liu Q, Li X, Yang J, Liu S, Huang Y, Scanlon MJ, Nettleton D, Schnable PS. Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS. Genome Biology. 18: 192. PMID 29041960 DOI: 10.1186/S13059-017-1328-6  0.687
2017 Dong Z, Li W, Unger-Wallace E, Yang J, Vollbrecht E, Chuck G. Ideal crop plant architecture is mediated by tassels replace upper ears1, a BTB/POZ ankyrin repeat gene directly targeted by TEOSINTE BRANCHED1. Proceedings of the National Academy of Sciences of the United States of America. PMID 28973898 DOI: 10.1073/Pnas.1714960114  0.349
2017 Yang J, Mezmouk S, Baumgarten A, Buckler ES, Guill KE, McMullen MD, Mumm RH, Ross-Ibarra J. Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize. Plos Genetics. 13: e1007019. PMID 28953891 DOI: 10.1371/Journal.Pgen.1007019  0.774
2017 Hao J, Yang J, Dong J, Fei SZ. Characterization of BdCBF genes and genome-wide transcriptome profiling of BdCBF3-dependent and -independent cold stress responses in Brachypodium distachyon. Plant Science : An International Journal of Experimental Plant Biology. 262: 52-61. PMID 28716420 DOI: 10.1016/J.Plantsci.2017.06.001  0.324
2015 Leiboff S, Li X, Hu HC, Todt N, Yang J, Li X, Yu X, Muehlbauer GJ, Timmermans MC, Yu J, Schnable PS, Scanlon MJ. Genetic control of morphometric diversity in the maize shoot apical meristem. Nature Communications. 6: 8974. PMID 26584889 DOI: 10.1038/Ncomms9974  0.678
2015 Sosso D, Luo D, Li QB, Sasse J, Yang J, Gendrot G, Suzuki M, Koch KE, McCarty DR, Chourey PS, Rogowsky PM, Ross-Ibarra J, Yang B, Frommer WB. Seed filling in domesticated maize and rice depends on SWEET-mediated hexose transport. Nature Genetics. PMID 26523777 DOI: 10.1038/Ng.3422  0.563
2015 Yang J, Jiang H, Yeh CT, Yu J, Jeddeloh JA, Nettleton D, Schnable PS. Extreme Phenotype-Genome-Wide Association Study (XP-GWAS): a method for identifying trait-associated variants by sequencing pools of individuals selected from a diversity panel. The Plant Journal : For Cell and Molecular Biology. PMID 26386250 DOI: 10.1111/Tpj.13029  0.686
2012 Liu S, Ying K, Yeh CT, Yang J, Swanson-Wagner R, Wu W, Richmond T, Gerhardt DJ, Lai J, Springer N, Nettleton D, Jeddeloh JA, Schnable PS. Changes in genome content generated via segregation of non-allelic homologs. The Plant Journal : For Cell and Molecular Biology. 72: 390-9. PMID 22731681 DOI: 10.1111/J.1365-313X.2012.05087.X  0.739
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