shoudong zhang - Publications

Affiliations: 
The Chinese University of Hong Kong, Hong Kong, Hong Kong 
Area:
plant molecular biology, mobile RNAs, epigenetics, epitranscriptome, abiotic stresses, alternative splicing

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Luo M, Sarnowski TJ, Libault M, Ríos G, Charron JB, Mantri N, Zhang S. Editorial: New insights into mechanisms of epigenetic modifiers in plant growth and development, volume II. Frontiers in Plant Science. 14: 1213511. PMID 37409285 DOI: 10.3389/fpls.2023.1213511  0.385
2022 Rehman HM, Chen S, Zhang S, Khalid M, Uzair M, Wilmarth PA, Ahmad S, Lam HM. Membrane Proteomic Profiling of Soybean Leaf and Root Tissues Uncovers Salt-Stress-Responsive Membrane Proteins. International Journal of Molecular Sciences. 23. PMID 36362058 DOI: 10.3390/ijms232113270  0.656
2022 Wang Y, Zhang H, Wang P, Zhong H, Liu W, Zhang S, Xiong L, Wu Y, Xia Y. Arabidopsis EXTRA-LARGE G PROTEIN 1 (XLG1) functions together with XLG2 and XLG3 in PAMP-triggered MAPK activation and immunity. Journal of Integrative Plant Biology. PMID 36250681 DOI: 10.1111/jipb.13391  0.74
2021 Xie S, Leung AW, Zheng Z, Zhang D, Xiao C, Luo R, Luo M, Zhang S. Applications and potentials of nanopore sequencing in the (epi)genome and (epi)transcriptome era. Innovation (New York, N.Y.). 2: 100153. PMID 34901902 DOI: 10.1016/j.xinn.2021.100153  0.752
2021 Wang Q, Bao X, Chen S, Zhong H, Liu Y, Zhang L, Xia Y, Kragler F, Luo M, Li XD, Lam HM, Zhang S. AtHDA6 functions as an H3K18ac eraser to maintain pericentromeric CHG methylation in Arabidopsis thaliana. Nucleic Acids Research. PMID 34403482 DOI: 10.1093/nar/gkab706  0.738
2021 Lu Z, Cui J, Wang L, Teng N, Zhang S, Lam HM, Zhu Y, Xiao S, Ke W, Lin J, Xu C, Jin B. Genome-wide DNA mutations in Arabidopsis plants after multigenerational exposure to high temperatures. Genome Biology. 22: 160. PMID 34034794 DOI: 10.1186/s13059-021-02381-4  0.638
2021 Zhang H, Zhong H, Wang X, Zhang S, Shao X, Hu H, Yu Z, Cai Z, Chen X, Xia Y. Use of NAD tagSeq II to identify growth phase-dependent alterations in RNA NAD capping. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33782135 DOI: 10.1073/pnas.2026183118  0.677
2020 Zhang S, Li R, Zhang L, Chen S, Xie M, Yang L, Xia Y, Foyer CH, Zhao Z, Lam HM. New insights into Arabidopsis transcriptome complexity revealed by direct sequencing of native RNAs. Nucleic Acids Research. PMID 32652016 DOI: 10.1093/Nar/Gkaa588  0.74
2020 Guan D, Yan B, Thieme C, Hua J, Zhu H, Boheler KR, Zhao Z, Kragler F, Xia Y, Zhang S. PlaMoM: a comprehensive database compiles plant mobile macromolecules. Nucleic Acids Research. PMID 32556150 DOI: 10.1093/nar/gkaa538  0.742
2019 Luo M, Ríos G, Sarnowski TJ, Zhang S, Mantri N, Charron JB, Libault M. Editorial: New Insights Into Mechanisms of Epigenetic Modifiers in Plant Growth and Development. Frontiers in Plant Science. 10: 1661. PMID 31998346 DOI: 10.3389/fpls.2019.01661  0.398
2019 Yang L, Perrera V, Saplaoura E, Apelt F, Bahin M, Kramdi A, Olas J, Mueller-Roeber B, Sokolowska E, Zhang W, Li R, Pitzalis N, Heinlein M, Zhang S, Genovesio A, et al. mC Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants. Current Biology : Cb. PMID 31327714 DOI: 10.1016/J.Cub.2019.06.042  0.713
2019 Guan D, Xia Y, Zhang S. Analyzing and Predicting Phloem Mobility of Macromolecules with an Online Database. Methods in Molecular Biology (Clifton, N.J.). 2014: 433-438. PMID 31197814 DOI: 10.1007/978-1-4939-9562-2_33  0.716
2019 Zhang H, Zhong H, Zhang S, Shao X, Ni M, Cai Z, Chen X, Xia Y. NAD tagSeq reveals that NAD-capped RNAs are mostly produced from a large number of protein-coding genes in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31142650 DOI: 10.1073/Pnas.1903683116  0.715
2018 Huang W, Zhao C, Zhong H, Zhang S, Xia Y, Cai Z. Bisphenol S induced epigenetic and transcriptional changes in human breast cancer cell line MCF-7. Environmental Pollution (Barking, Essex : 1987). 246: 697-703. PMID 30616060 DOI: 10.1016/J.Envpol.2018.12.084  0.61
2018 Zhang S, Zhang H, Xia Y, Xiong L. The caseinolytic protease complex component CLPC1 in Arabidopsis maintains proteome and RNA homeostasis in chloroplasts. Bmc Plant Biology. 18: 192. PMID 30208840 DOI: 10.1186/S12870-018-1396-0  0.783
2016 Guan D, Yan B, Thieme C, Hua J, Zhu H, Boheler KR, Zhao Z, Kragler F, Xia Y, Zhang S. PlaMoM: a comprehensive database compiles plant mobile macromolecules. Nucleic Acids Research. PMID 27924044 DOI: 10.1093/Nar/Gkw988  0.78
2015 Zhang S, Zhan X, Xu X, Cui P, Zhu JK, Xia Y, Xiong L. Two domain-disrupted hda6 alleles have opposite epigenetic effects on transgenes and some endogenous targets. Scientific Reports. 5: 17832. PMID 26666962 DOI: 10.1038/Srep17832  0.739
2014 Ding F, Cui P, Wang Z, Zhang S, Ali S, Xiong L. Genome-wide analysis of alternative splicing of pre-mRNA under salt stress in Arabidopsis. Bmc Genomics. 15: 431. PMID 24897929 DOI: 10.1186/1471-2164-15-431  0.718
2014 Cui P, Zhang S, Ding F, Ali S, Xiong L. Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis. Genome Biology. 15: R1. PMID 24393432 DOI: 10.1186/Gb-2014-15-1-R1  0.731
2013 Chen T, Cui P, Chen H, Ali S, Zhang S, Xiong L. A KH-domain RNA-binding protein interacts with FIERY2/CTD phosphatase-like 1 and splicing factors and is important for pre-mRNA splicing in Arabidopsis. Plos Genetics. 9: e1003875. PMID 24146632 DOI: 10.1371/Journal.Pgen.1003875  0.75
2012 You N, Murillo G, Su X, Zeng X, Xu J, Ning K, Zhang S, Zhu J, Cui X. SNP calling using genotype model selection on high-throughput sequencing data. Bioinformatics (Oxford, England). 28: 643-50. PMID 22253293 DOI: 10.1093/Bioinformatics/Bts001  0.497
2010 Gao Z, Liu HL, Daxinger L, Pontes O, He X, Qian W, Lin H, Xie M, Lorkovic ZJ, Zhang S, Miki D, Zhan X, Pontier D, Lagrange T, Jin H, et al. An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature. 465: 106-9. PMID 20410883 DOI: 10.1038/Nature09025  0.773
2009 Zhang S, Sun L, Kragler F. The phloem-delivered RNA pool contains small noncoding RNAs and interferes with translation. Plant Physiology. 150: 378-87. PMID 19261735 DOI: 10.1104/Pp.108.134767  0.711
2007 Winter N, Kollwig G, Zhang S, Kragler F. MPB2C, a microtubule-associated protein, regulates non-cell-autonomy of the homeodomain protein KNOTTED1. The Plant Cell. 19: 3001-18. PMID 17965274 DOI: 10.1105/Tpc.107.044354  0.642
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