Sivakumar Pattathil - Publications

2003-2005 University of Georgia, Athens, Athens, GA, United States 

89 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Nakashima J, Pattathil S, Avci U, Chin S, Alan Sparks J, Hahn MG, Gilroy S, Blancaflor EB. Glycome profiling and immunohistochemistry uncover changes in cell walls of Arabidopsis thaliana roots during spaceflight. Npj Microgravity. 9: 68. PMID 37608048 DOI: 10.1038/s41526-023-00312-0  0.401
2022 Xue S, Pattathil S, da Costa Sousa L, Ubanwa B, Dale B, Jones AD, Balan V. Understanding the structure and composition of recalcitrant oligosaccharides in hydrolysate using high-throughput biotin-based glycome profiling and mass spectrometry. Scientific Reports. 12: 2521. PMID 35169269 DOI: 10.1038/s41598-022-06530-y  0.323
2021 Crowe JD, Hao P, Pattathil S, Pan H, Ding SY, Hodge DB, Jensen JK. Xylan Is Critical for Proper Bundling and Alignment of Cellulose Microfibrils in Plant Secondary Cell Walls. Frontiers in Plant Science. 12: 737690. PMID 34630488 DOI: 10.3389/fpls.2021.737690  0.391
2021 Molina A, Miedes E, Bacete L, Rodríguez T, Mélida H, Denancé N, Sánchez-Vallet A, Rivière MP, López G, Freydier A, Barlet X, Pattathil S, Hahn M, Goffner D. cell wall composition determines disease resistance specificity and fitness. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33509925 DOI: 10.1073/pnas.2010243118  0.369
2020 Ren G, Rosquete MR, Peralta AG, Pattathil S, Hahn MG, Wilkop T, Drakakaki G. Isolation and Glycomic Analysis of Trans-Golgi Network Vesicles in Plants. Methods in Molecular Biology (Clifton, N.J.). 2177: 153-167. PMID 32632812 DOI: 10.1007/978-1-0716-0767-1_13  0.387
2020 Tsai CJ, Xu P, Xue LJ, Hu H, Nyamdari B, Naran R, Zhou X, Goeminne G, Gao R, Gjersing E, Dahlen J, Pattathil S, Hahn MG, Davis M, Ralph J, et al. Compensatory guaiacyl lignin biosynthesis at the expense of syringyl lignin in 4CL1-knockout poplar. Plant Physiology. PMID 32139476 DOI: 10.1104/Pp.19.01550  0.344
2020 Gallego-Giraldo L, Liu C, Pose-Albacete S, Pattathil S, Peralta AG, Young J, Westpheling J, Hahn MG, Rao X, Knox JP, De Meester B, Boerjan W, Dixon RA. ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1) releases latent defense signals in stems with reduced lignin content. Proceedings of the National Academy of Sciences of the United States of America. PMID 31974310 DOI: 10.1073/Pnas.1914422117  0.511
2020 Kothari N, Bhagia S, Pu Y, Yoo CG, Li M, Venketachalam S, Pattathil S, Kumar R, Cai CM, Hahn MG, Ragauskas AJ, Wyman CE. The effect of switchgrass plant cell wall properties on its deconstruction by thermochemical pretreatments coupled with fungal enzymatic hydrolysis or Clostridium thermocellum consolidated bioprocessing Green Chemistry. 22: 7924-7945. DOI: 10.1039/d0gc02546a  0.388
2019 Brannan RG, Faik A, Goelz R, Pattathil S. Identification and analysis of cell wall glycan epitopes and polyphenol oxidase in pawpaw ( [L.] Dunal) fruit pulp as affected by high pressure processing and refrigerated storage. Food Science and Technology International = Ciencia Y Tecnologia De Los Alimentos Internacional. 1082013219856769. PMID 31291761 DOI: 10.1177/1082013219856769  0.436
2019 Xie H, Engle NL, Venketachalam S, Yoo CG, Barros J, Lecoultre M, Howard N, Li G, Sun L, Srivastava AC, Pattathil S, Pu Y, Hahn MG, Ragauskas AJ, Nelson RS, et al. Combining loss of function of and --- for lignin reduction and improved saccharification efficiency in . Biotechnology For Biofuels. 12: 108. PMID 31073332 DOI: 10.1186/S13068-019-1446-3  0.326
2019 da Costa RMF, Pattathil S, Avci U, Winters A, Hahn MG, Bosch M. Desirable plant cell wall traits for higher-quality miscanthus lignocellulosic biomass. Biotechnology For Biofuels. 12: 85. PMID 31011368 DOI: 10.1186/S13068-019-1426-7  0.493
2019 Okekeogbu IO, Pattathil S, González Fernández-Niño SM, Aryal UK, Penning BW, Lao J, Heazlewood JL, Hahn MG, McCann MC, Carpita NC. Glycome and proteome components of Golgi membranes are common between two angiosperms with distinct cell wall structures. The Plant Cell. PMID 30914498 DOI: 10.1105/Tpc.18.00755  0.506
2019 Wilkop T, Pattathil S, Ren G, Davis DJ, Bao W, Duan D, Peralta AG, Domozych D, Hahn MG, Drakakaki G. A hybrid approach enabling large scale glycome analysis of post-Golgi vesicles reveals a transport route for polysaccharides. The Plant Cell. PMID 30760563 DOI: 10.1105/Tpc.18.00854  0.432
2019 Avci U, Zhou X, Pattathil S, da Costa Sousa L, Hahn MG, Dale B, Xu Y, Balan V. Effects of Extractive Ammonia Pretreatment on the Ultrastructure and Glycan Composition of Corn Stover Frontiers in Energy Research. 7. DOI: 10.3389/Fenrg.2019.00085  0.517
2019 Lin Z, Pattathil S, Hahn MG, Wicker L. Blueberry cell wall fractionation, characterization and glycome profiling Food Hydrocolloids. 90: 385-393. DOI: 10.1016/J.Foodhyd.2018.12.051  0.373
2018 Amos RA, Pattathil S, Yang JY, Atmodjo MA, Urbanowicz BR, Moremen KW, Mohnen D. A two-phase model for the non-processive biosynthesis of homogalacturonan polysaccharides by the GAUT1:GAUT7 complex. The Journal of Biological Chemistry. PMID 30327429 DOI: 10.1074/Jbc.Ra118.004463  0.398
2018 Gallego-Giraldo L, Posé S, Pattathil S, Peralta AG, Hahn MG, Ayre BG, Sunuwar J, Hernandez J, Patel M, Shah J, Rao X, Knox JP, Dixon RA. Elicitors and defense gene induction in plants with altered lignin compositions. The New Phytologist. PMID 29949660 DOI: 10.1111/Nph.15258  0.493
2018 Sopeña-Torres S, Jordá L, Sánchez-Rodríguez C, Miedes E, Escudero V, Swami S, López G, Piślewska-Bednarek M, Lassowskat I, Lee J, Gu Y, Haigis S, Alexander D, Pattathil S, Muñoz-Barrios A, et al. YODA MAP3K kinase regulates plant immune responses conferring broad-spectrum disease resistance. The New Phytologist. PMID 29451312 DOI: 10.1111/Nph.15007  0.337
2018 Biswal AK, Atmodjo MA, Li M, Baxter HL, Yoo CG, Pu Y, Lee YC, Mazarei M, Black IM, Zhang JY, Ramanna H, Bray AL, King ZR, LaFayette PR, Pattathil S, et al. Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis. Nature Biotechnology. PMID 29431741 DOI: 10.1038/Nbt.4067  0.437
2018 Biswal AK, Atmodjo MA, Pattathil S, Amos RA, Yang X, Winkeler K, Collins C, Mohanty SS, Ryno D, Tan L, Gelineo-Albersheim I, Hunt K, Sykes RW, Turner GB, Ziebell A, et al. Working towards recalcitrance mechanisms: increased xylan and homogalacturonan production by overexpression of GAlactUronosylTransferase12 (GAUT12) causes increased recalcitrance and decreased growth in Populus. Biotechnology For Biofuels. 11: 9. PMID 29371885 DOI: 10.1186/S13068-017-1002-Y  0.441
2018 Vogler BW, Starkenburg SR, Sudasinghe N, Schambach JY, Rollin JA, Pattathil S, Barry AN. Characterization of plant carbon substrate utilization by Auxenochlorella protothecoides Algal Research. 34: 37-48. DOI: 10.1016/J.Algal.2018.07.001  0.435
2017 Rao X, Shen H, Pattathil S, Hahn MG, Gelineo-Albersheim I, Mohnen D, Pu Y, Ragauskas AJ, Chen X, Chen F, Dixon RA. Dynamic changes in transcriptome and cell wall composition underlying brassinosteroid-mediated lignification of switchgrass suspension cells. Biotechnology For Biofuels. 10: 266. PMID 29213317 DOI: 10.1186/S13068-017-0954-2  0.521
2017 Peralta AG, Venkatachalam S, Stone SC, Pattathil S. Xylan epitope profiling: an enhanced approach to study organ development-dependent changes in xylan structure, biosynthesis, and deposition in plant cell walls. Biotechnology For Biofuels. 10: 245. PMID 29213310 DOI: 10.1186/S13068-017-0935-5  0.547
2017 Leite DCC, Grandis A, Tavares EQP, Piovezani AR, Pattathil S, Avci U, Rossini A, Cambler A, De Souza AP, Hahn MG, Buckeridge MS. Cell wall changes during the formation of aerenchyma in sugarcane roots. Annals of Botany. PMID 29106454 DOI: 10.1093/Aob/Mcx050  0.488
2017 Johnson CM, Subramanian A, Pattathil S, Correll MJ, Kiss JZ. Comparative transcriptomics indicate changes in cell wall organization and stress response in seedlings during spaceflight. American Journal of Botany. PMID 28827451 DOI: 10.3732/Ajb.1700079  0.44
2017 Crowe JD, Feringa N, Pattathil S, Merritt B, Foster C, Dines D, Ong RG, Hodge DB. Identification of developmental stage and anatomical fraction contributions to cell wall recalcitrance in switchgrass. Biotechnology For Biofuels. 10: 184. PMID 28725264 DOI: 10.1186/S13068-017-0870-5  0.523
2017 Thapa SP, Pattathil S, Hahn M, Jacques MA, Gilbertson B, Coaker G. Genomic analysis of Clavibacter michiganensis reveals insight into virulence strategies and genetic diversity of a Gram-positive bacterial pathogen. Molecular Plant-Microbe Interactions : Mpmi. PMID 28677494 DOI: 10.1094/Mpmi-06-17-0146-R  0.304
2017 Pattathil S, Ingwers MW, Aubrey DP, Li Z, Dahlen J. A quantitative method for analyzing glycome profiles of plant cell walls. Carbohydrate Research. 448: 128-135. PMID 28662408 DOI: 10.1016/J.Carres.2017.06.009  0.417
2017 Damm T, Pattathil S, Günl M, Jablonowski ND, O'Neill M, Grün KS, Grande PM, Leitner W, Schurr U, Usadel B, Klose H. Insights into cell wall structure of Sida hermaphrodita and its influence on recalcitrance. Carbohydrate Polymers. 168: 94-102. PMID 28457468 DOI: 10.1016/J.Carbpol.2017.03.062  0.501
2017 Rautengarten C, Birdseye D, Pattathil S, McFarlane HE, Saez-Aguayo S, Orellana A, Persson S, Hahn MG, Scheller HV, Heazlewood JL, Ebert B. The elaborate route for UDP-arabinose delivery into the Golgi of plants. Proceedings of the National Academy of Sciences of the United States of America. PMID 28373556 DOI: 10.1073/Pnas.1701894114  0.402
2017 Gunawan C, Xue S, Pattathil S, da Costa Sousa L, Dale BE, Balan V. Comprehensive characterization of non-cellulosic recalcitrant cell wall carbohydrates in unhydrolyzed solids from AFEX-pretreated corn stover. Biotechnology For Biofuels. 10: 82. PMID 28360940 DOI: 10.1186/S13068-017-0757-5  0.426
2017 Bacete L, Mélida H, Pattathil S, Hahn MG, Molina A, Miedes E. Characterization of Plant Cell Wall Damage-Associated Molecular Patterns Regulating Immune Responses. Methods in Molecular Biology (Clifton, N.J.). 1578: 13-23. PMID 28220412 DOI: 10.1007/978-1-4939-6859-6_2  0.492
2017 Engelsdorf T, Will C, Hofmann J, Schmitt C, Merritt BB, Rieger L, Frenger MS, Marschall A, Franke RB, Pattathil S, Voll LM. Cell wall composition and penetration resistance against the fungal pathogen Colletotrichum higginsianum are affected by impaired starch turnover in Arabidopsis mutants. Journal of Experimental Botany. 68: 701-713. PMID 28204541 DOI: 10.1093/Jxb/Erw434  0.455
2017 Walker JA, Pattathil S, Bergeman LF, Beebe ET, Deng K, Mirzai M, Northen TR, Hahn MG, Fox BG. Determination of glycoside hydrolase specificities during hydrolysis of plant cell walls using glycome profiling. Biotechnology For Biofuels. 10: 31. PMID 28184246 DOI: 10.1186/S13068-017-0703-6  0.481
2017 Mohapatra S, Pattathil S, Thatoi H. Structural and Functional Characterization of Two Pennisetum sp. Biomass during Ultrasono-Assisted Alkali Pretreatment and Enzymatic Hydrolysis for Understanding the Mechanism of Targeted Delignification and Enhanced Saccharification Acs Sustainable Chemistry & Engineering. 5: 6486-6497. DOI: 10.1021/Acssuschemeng.7B00596  0.332
2017 Mittal A, Katahira R, Donohoe BS, Pattathil S, Kandemkavil S, Reed ML, Biddy MJ, Beckham GT. Ammonia Pretreatment of Corn Stover Enables Facile Lignin Extraction Acs Sustainable Chemistry & Engineering. 5: 2544-2561. DOI: 10.1021/Acssuschemeng.6B02892  0.367
2016 Moro CF, Gaspar M, da Silva FR, Pattathil S, Hahn MG, Salgado I, Braga MR. S-nitrosoglutathione promotes cell wall remodelling, alters the transcriptional profile and induces root hair formation in the hairless root hair defective 6 (rhd6) mutant of Arabidopsis thaliana. The New Phytologist. PMID 27880005 DOI: 10.1111/Nph.14309  0.481
2016 da Costa RM, Pattathil S, Avci U, Lee SJ, Hazen SP, Winters A, Hahn MG, Bosch M. A cell wall reference profile for Miscanthus bioenergy crops highlights compositional and structural variations associated with development and organ origin. The New Phytologist. PMID 27859277 DOI: 10.1111/Nph.14306  0.478
2016 Raimundo SC, Pattathil S, Eberhard S, Hahn MG, Popper ZA. β-1,3-Glucans are components of brown seaweed (Phaeophyceae) cell walls. Protoplasma. PMID 27562783 DOI: 10.1007/S00709-016-1007-6  0.42
2016 Pandey SK, Nookaraju A, Fujino T, Pattathil S, Joshi CP. Virus-induced gene silencing (VIGS)-mediated functional characterization of two genes involved in lignocellulosic secondary cell wall formation. Plant Cell Reports. PMID 27522520 DOI: 10.1007/S00299-016-2039-2  0.491
2016 Parthasarathi R, Sun J, Dutta T, Sun N, Pattathil S, Murthy Konda NV, Peralta AG, Simmons BA, Singh S. Activation of lignocellulosic biomass for higher sugar yields using aqueous ionic liquid at low severity process conditions. Biotechnology For Biofuels. 9: 160. PMID 27486479 DOI: 10.1186/S13068-016-0561-7  0.395
2016 Lin F, Manisseri C, Fagerström A, Peck ML, Vega-Sánchez ME, Williams B, Chiniquy DM, Saha P, Pattathil S, Conlin B, Zhu L, Hahn MG, Willats WG, Scheller HV, Ronald PC, et al. Cell Wall Composition and Candidate Biosynthesis Gene Expression Across Rice Development. Plant & Cell Physiology. PMID 27481893 DOI: 10.1093/Pcp/Pcw125  0.496
2016 Pattathil S, Ingwers MW, Victoriano OL, Kandemkavil S, McGuire MA, Teskey RO, Aubrey DP. Cell Wall Ultrastructure of Stem Wood, Roots, and Needles of a Conifer Varies in Response to Moisture Availability. Frontiers in Plant Science. 7: 882. PMID 27446114 DOI: 10.3389/Fpls.2016.00882  0.385
2016 Stonebloom S, Ebert B, Xiong G, Pattathil S, Birdseye D, Lao J, Pauly M, Hahn MG, Heazlewood JL, Scheller HV. A DUF-246 family glycosyltransferase-like gene affects male fertility and the biosynthesis of pectic arabinogalactans. Bmc Plant Biology. 16: 90. PMID 27091363 DOI: 10.1186/S12870-016-0780-X  0.426
2016 Paye JM, Guseva A, Hammer SK, Gjersing E, Davis MF, Davison BH, Olstad J, Donohoe BS, Nguyen TY, Wyman CE, Pattathil S, Hahn MG, Lynd LR. Biological lignocellulose solubilization: comparative evaluation of biocatalysts and enhancement via cotreatment. Biotechnology For Biofuels. 9: 8. PMID 26759604 DOI: 10.1186/S13068-015-0412-Y  0.316
2016 Bansal N, Bhalla A, Pattathil S, Adelman SL, Hahn MG, Hodge DB, Hegg EL. Cell wall-associated transition metals improve alkaline-oxidative pretreatment in diverse hardwoods Green Chemistry. 18: 1405-1415. DOI: 10.1039/C5Gc01748C  0.356
2016 Da Costa Sousa L, Jin M, Chundawat SPS, Bokade V, Tang X, Azarpira A, Lu F, Avci U, Humpula J, Uppugundla N, Gunawan C, Pattathil S, Cheh AM, Kothari N, Kumar R, et al. Next-generation ammonia pretreatment enhances cellulosic biofuel production Energy and Environmental Science. 9: 1215-1223. DOI: 10.1039/C5Ee03051J  0.345
2016 Salazar MM, Grandis A, Pattathil S, Neto JL, Camargo ELO, Alves A, Rodrigues JC, Squina F, Cairo JPF, Buckeridge MS, Hahn MG, Pereira GAG. Eucalyptus Cell Wall Architecture: Clues for Lignocellulosic Biomass Deconstruction Bioenergy Research. 9: 969-979. DOI: 10.1007/S12155-016-9770-Y  0.426
2015 Srivastava AC, Chen F, Ray T, Pattathil S, Peña MJ, Avci U, Li H, Huhman DV, Backe J, Urbanowicz B, Miller JS, Bedair M, Wyman CE, Sumner LW, York WS, et al. Loss of function of folylpolyglutamate synthetase 1 reduces lignin content and improves cell wall digestibility in Arabidopsis. Biotechnology For Biofuels. 8: 224. PMID 26697113 DOI: 10.1186/S13068-015-0403-Z  0.443
2015 Pattathil S, Avci U, Zhang T, Cardenas CL, Hahn MG. Immunological Approaches to Biomass Characterization and Utilization. Frontiers in Bioengineering and Biotechnology. 3: 173. PMID 26579515 DOI: 10.3389/Fbioe.2015.00173  0.543
2015 Raimundo SC, Avci U, Hopper C, Pattathil S, Hahn MG, Popper ZA. Immunolocalization of cell wall carbohydrate epitopes in seaweeds: presence of land plant epitopes in Fucus vesiculosus L. (Phaeophyceae). Planta. PMID 26411728 DOI: 10.1007/S00425-015-2412-3  0.496
2015 Swamy PS, Hu H, Pattathil S, Maloney VJ, Xiao H, Xue LJ, Chung JD, Johnson VE, Zhu Y, Peter GF, Hahn MG, Mansfield SD, Harding SA, Tsai CJ. Tubulin perturbation leads to unexpected cell wall modifications and affects stomatal behaviour in Populus. Journal of Experimental Botany. PMID 26246616 DOI: 10.1093/Jxb/Erv383  0.498
2015 Muszy?ski A, O'Neill MA, Ramasamy E, Pattathil S, Avci U, Peña MJ, Libault M, Hossain MS, Brechenmacher L, York WS, Barbosa RM, Hahn MG, Stacey G, Carlson RW. Xyloglucan, galactomannan, glucuronoxylan, and rhamnogalacturonan I do not have identical structures in soybean root and root hair cell walls. Planta. PMID 26067758 DOI: 10.1007/S00425-015-2344-Y  0.476
2015 Du Q, Avci U, Li S, Gallego-Giraldo L, Pattathil S, Qi L, Hahn MG, Wang H. Activation of miR165b represses AtHB15 expression and induces pith secondary wall development in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 26043238 DOI: 10.1111/Tpj.12897  0.418
2015 Pattathil S, Hahn MG, Dale BE, Chundawat SP. Insights into plant cell wall structure, architecture, and integrity using glycome profiling of native and AFEXTM-pre-treated biomass. Journal of Experimental Botany. 66: 4279-94. PMID 25911738 DOI: 10.1093/Jxb/Erv107  0.546
2015 De Souza AP, Kamei CL, Torres AF, Pattathil S, Hahn MG, Trindade LM, Buckeridge MS. How cell wall complexity influences saccharification efficiency in Miscanthus sinensis. Journal of Experimental Botany. 66: 4351-65. PMID 25908240 DOI: 10.1093/Jxb/Erv183  0.44
2015 Biswal AK, Hao Z, Pattathil S, Yang X, Winkeler K, Collins C, Mohanty SS, Richardson EA, Gelineo-Albersheim I, Hunt K, Ryno D, Sykes RW, Turner GB, Ziebell A, Gjersing E, et al. Downregulation of GAUT12 in Populus deltoides by RNA silencing results in reduced recalcitrance, increased growth and reduced xylan and pectin in a woody biofuel feedstock. Biotechnology For Biofuels. 8: 41. PMID 25802552 DOI: 10.1186/S13068-015-0218-Y  0.501
2015 Kong Y, Peña MJ, Renna L, Avci U, Pattathil S, Tuomivaara ST, Li X, Reiter WD, Brandizzi F, Hahn MG, Darvill AG, York WS, O'Neill MA. Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis. Plant Physiology. 167: 1296-306. PMID 25673778 DOI: 10.1104/Pp.114.255943  0.389
2014 Tan L, Pu Y, Pattathil S, Avci U, Qian J, Arter A, Chen L, Hahn MG, Ragauskas AJ, Kieliszewski MJ. Changes in cell wall properties coincide with overexpression of extensin fusion proteins in suspension cultured tobacco cells. Plos One. 9: e115906. PMID 25536327 DOI: 10.1371/Journal.Pone.0115906  0.48
2014 Izquierdo JA, Pattathil S, Guseva A, Hahn MG, Lynd LR. Comparative analysis of the ability of Clostridium clariflavum strains and Clostridium thermocellum to utilize hemicellulose and unpretreated plant material. Biotechnology For Biofuels. 7: 136. PMID 25426163 DOI: 10.1186/S13068-014-0136-4  0.352
2014 Chung D, Pattathil S, Biswal AK, Hahn MG, Mohnen D, Westpheling J. Deletion of a gene cluster encoding pectin degrading enzymes in Caldicellulosiruptor bescii reveals an important role for pectin in plant biomass recalcitrance. Biotechnology For Biofuels. 7: 147. PMID 25324897 DOI: 10.1186/S13068-014-0147-1  0.47
2014 Hao Z, Avci U, Tan L, Zhu X, Glushka J, Pattathil S, Eberhard S, Sholes T, Rothstein GE, Lukowitz W, Orlando R, Hahn MG, Mohnen D. Loss of Arabidopsis GAUT12/IRX8 causes anther indehiscence and leads to reduced G lignin associated with altered matrix polysaccharide deposition. Frontiers in Plant Science. 5: 357. PMID 25120548 DOI: 10.3389/Fpls.2014.00357  0.428
2014 Li H, Pattathil S, Foston MB, Ding SY, Kumar R, Gao X, Mittal A, Yarbrough JM, Himmel ME, Ragauskas AJ, Hahn MG, Wyman CE. Agave proves to be a low recalcitrant lignocellulosic feedstock for biofuels production on semi-arid lands. Biotechnology For Biofuels. 7: 50. PMID 24708685 DOI: 10.1186/1754-6834-7-50  0.404
2014 Edwards MC, Williams T, Pattathil S, Hahn MG, Doran-Peterson J. Replacing a suite of commercial pectinases with a single enzyme, pectate lyase B, in Saccharomyces cerevisiae fermentations of cull peaches. Journal of Industrial Microbiology & Biotechnology. 41: 679-86. PMID 24585204 DOI: 10.1007/S10295-013-1394-Z  0.329
2014 Biswal AK, Soeno K, Gandla ML, Immerzeel P, Pattathil S, Lucenius J, Serimaa R, Hahn MG, Moritz T, Jönsson LJ, Israelsson-Nordström M, Mellerowicz EJ. Aspen pectate lyase PtxtPL1-27 mobilizes matrix polysaccharides from woody tissues and improves saccharification yield. Biotechnology For Biofuels. 7: 11. PMID 24450583 DOI: 10.1186/1754-6834-7-11  0.434
2014 Li M, Pattathil S, Hahn MG, Hodge DB. Identification of features associated with plant cell wall recalcitrance to pretreatment by alkaline hydrogen peroxide in diverse bioenergy feedstocks using glycome profiling Rsc Advances. 4: 17282-17292. DOI: 10.1039/C4Ra00824C  0.485
2014 Kemppainen K, Siika-aho M, Pattathil S, Giovando S, Kruus K. Spruce bark as an industrial source of condensed tannins and non-cellulosic sugars Industrial Crops and Products. 52: 158-168. DOI: 10.1016/J.Indcrop.2013.10.009  0.307
2013 Liang Y, Basu D, Pattathil S, Xu WL, Venetos A, Martin SL, Faik A, Hahn MG, Showalter AM. Biochemical and physiological characterization of fut4 and fut6 mutants defective in arabinogalactan-protein fucosylation in Arabidopsis. Journal of Experimental Botany. 64: 5537-51. PMID 24127514 DOI: 10.1093/Jxb/Ert321  0.504
2013 Zhao Q, Tobimatsu Y, Zhou R, Pattathil S, Gallego-Giraldo L, Fu C, Jackson LA, Hahn MG, Kim H, Chen F, Ralph J, Dixon RA. Loss of function of cinnamyl alcohol dehydrogenase 1 leads to unconventional lignin and a temperature-sensitive growth defect in Medicago truncatula. Proceedings of the National Academy of Sciences of the United States of America. 110: 13660-5. PMID 23901113 DOI: 10.1073/Pnas.1312234110  0.45
2013 Shen H, Poovaiah CR, Ziebell A, Tschaplinski TJ, Pattathil S, Gjersing E, Engle NL, Katahira R, Pu Y, Sykes R, Chen F, Ragauskas AJ, Mielenz JR, Hahn MG, Davis M, et al. Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production. Biotechnology For Biofuels. 6: 71. PMID 23651942 DOI: 10.1186/1754-6834-6-71  0.339
2013 Tan L, Eberhard S, Pattathil S, Warder C, Glushka J, Yuan C, Hao Z, Zhu X, Avci U, Miller JS, Baldwin D, Pham C, Orlando R, Darvill A, Hahn MG, et al. An Arabidopsis cell wall proteoglycan consists of pectin and arabinoxylan covalently linked to an arabinogalactan protein. The Plant Cell. 25: 270-87. PMID 23371948 DOI: 10.1105/Tpc.112.107334  0.466
2013 Kataeva I, Foston MB, Yang SJ, Pattathil S, Biswal AK, Poole FL, Basen M, Rhaesa AM, Thomas TP, Azadi P, Olman V, Saffold TD, Mohler KE, Lewis DL, Doeppke C, et al. Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature Energy and Environmental Science. 6: 2186-2195. DOI: 10.1039/C3Ee40932E  0.479
2013 Demartini JD, Pattathil S, Miller JS, Li H, Hahn MG, Wyman CE. Investigating plant cell wall components that affect biomass recalcitrance in poplar and switchgrass Energy and Environmental Science. 6: 898-909. DOI: 10.1039/C3Ee23801F  0.508
2013 de Souza AP, Leite DCC, Pattathil S, Hahn MG, Buckeridge MS. Composition and Structure of Sugarcane Cell Wall Polysaccharides: Implications for Second-Generation Bioethanol Production Bioenergy Research. 6: 564-579. DOI: 10.1007/S12155-012-9268-1  0.506
2012 Avci U, Pattathil S, Hahn MG. Immunological approaches to plant cell wall and biomass characterization: immunolocalization of glycan epitopes. Methods in Molecular Biology (Clifton, N.J.). 908: 73-82. PMID 22843390 DOI: 10.1007/978-1-61779-956-3_7  0.536
2012 Pattathil S, Avci U, Miller JS, Hahn MG. Immunological approaches to plant cell wall and biomass characterization: Glycome Profiling. Methods in Molecular Biology (Clifton, N.J.). 908: 61-72. PMID 22843389 DOI: 10.1007/978-1-61779-956-3_6  0.506
2012 Zabotina OA, Avci U, Cavalier D, Pattathil S, Chou YH, Eberhard S, Danhof L, Keegstra K, Hahn MG. Mutations in multiple XXT genes of Arabidopsis reveal the complexity of xyloglucan biosynthesis. Plant Physiology. 159: 1367-84. PMID 22696020 DOI: 10.1104/Pp.112.198119  0.479
2012 Lee SJ, Warnick TA, Pattathil S, Alvelo-Maurosa JG, Serapiglia MJ, McCormick H, Brown V, Young NF, Schnell DJ, Smart LB, Hahn MG, Pedersen JF, Leschine SB, Hazen SP. Biological conversion assay using Clostridium phytofermentans to estimate plant feedstock quality. Biotechnology For Biofuels. 5: 5. PMID 22316115 DOI: 10.1186/1754-6834-5-5  0.401
2012 Kulkarni AR, Peña MJ, Avci U, Mazumder K, Urbanowicz BR, Pattathil S, Yin Y, O'Neill MA, Roberts AW, Hahn MG, Xu Y, Darvill AG, York WS. The ability of land plants to synthesize glucuronoxylans predates the evolution of tracheophytes. Glycobiology. 22: 439-51. PMID 22048859 DOI: 10.1093/Glycob/Cwr117  0.438
2012 Kulkarni AR, Pattathil S, Hahn MG, York WS, O'Neill MA. Comparison of arabinoxylan structure in bioenergy and model grasses Industrial Biotechnology. 8: 222-229. DOI: 10.1089/Ind.2012.0014  0.34
2012 Pattathil S, Saffold T, Gallego-Giraldo L, O'Neill M, York WS, Dixon RA, Hahn MG. Changes in cell wall carbohydrate extractability are correlated with reduced recalcitrance of HCT downregulated alfalfa biomass Industrial Biotechnology. 8: 217-221. DOI: 10.1089/Ind.2012.0013  0.507
2012 Duceppe MO, Bertrand A, Pattathil S, Miller J, Castonguay Y, Hahn MG, Michaud R, Dubé MP. Assessment of Genetic Variability of Cell Wall Degradability for the Selection of Alfalfa with Improved Saccharification Efficiency Bioenergy Research. 5: 904-914. DOI: 10.1007/S12155-012-9204-4  0.319
2011 Klopffleisch K, Phan N, Augustin K, Bayne RS, Booker KS, Botella JR, Carpita NC, Carr T, Chen JG, Cooke TR, Frick-Cheng A, Friedman EJ, Fulk B, Hahn MG, Jiang K, ... ... Pattathil S, et al. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Molecular Systems Biology. 7: 532. PMID 21952135 DOI: 10.1038/Msb.2011.66  0.312
2011 Kong Y, Zhou G, Yin Y, Xu Y, Pattathil S, Hahn MG. Molecular analysis of a family of Arabidopsis genes related to galacturonosyltransferases. Plant Physiology. 155: 1791-805. PMID 21300919 DOI: 10.1104/Pp.110.163220  0.423
2011 Demartini JD, Pattathil S, Avci U, Szekalski K, Mazumder K, Hahn MG, Wyman CE. Application of monoclonal antibodies to investigate plant cell wall deconstruction for biofuels production Energy and Environmental Science. 4: 4332-4339. DOI: 10.1039/C1Ee02112E  0.514
2010 Zhu X, Pattathil S, Mazumder K, Brehm A, Hahn MG, Dinesh-Kumar SP, Joshi CP. Virus-induced gene silencing offers a functional genomics platform for studying plant cell wall formation. Molecular Plant. 3: 818-33. PMID 20522525 DOI: 10.1093/Mp/Ssq023  0.513
2010 Pattathil S, Avci U, Baldwin D, Swennes AG, McGill JA, Popper Z, Bootten T, Albert A, Davis RH, Chennareddy C, Dong R, O'Shea B, Rossi R, Leoff C, Freshour G, et al. A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies Plant Physiology. 153: 514-525. PMID 20363856 DOI: 10.1104/Pp.109.151985  0.495
2009 Caffall KH, Pattathil S, Phillips SE, Hahn MG, Mohnen D. Arabidopsis thaliana T-DNA mutants implicate GAUT genes in the biosynthesis of pectin and xylan in cell walls and seed testa. Molecular Plant. 2: 1000-14. PMID 19825675 DOI: 10.1093/Mp/Ssp062  0.418
2005 Pattathil S, Harper AD, Bar-Peled M. Biosynthesis of UDP-xylose: characterization of membrane-bound AtUxs2. Planta. 221: 538-48. PMID 15655675 DOI: 10.1007/S00425-004-1471-7  0.666
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