Poonam Pandey - Publications
Affiliations: | University of Maryland, College Park, College Park, MD |
Area:
Computational ChemistryYear | Citation | Score | |||
---|---|---|---|---|---|
2022 | Kumar A, Pandey P, Chatterjee P, MacKerell AD. Deep Neural Network Model to Predict the Electrostatic Parameters in the Polarizable Classical Drude Oscillator Force Field. Journal of Chemical Theory and Computation. 18: 1711-1725. PMID 35148088 DOI: 10.1021/acs.jctc.1c01166 | 0.648 | |||
2021 | Lind C, Pandey P, Pastor RW, MacKerell AD. Functional Group Distributions, Partition Coefficients, and Resistance Factors in Lipid Bilayers Using Site Identification by Ligand Competitive Saturation. Journal of Chemical Theory and Computation. 17: 3188-3202. PMID 33929848 DOI: 10.1021/acs.jctc.1c00089 | 0.681 | |||
2020 | Lin FY, Huang J, Pandey P, Rupakheti C, Li J, Roux B, MacKerell AD. Further Optimization and Validation of the Classical Drude Polarizable Protein Force Field. Journal of Chemical Theory and Computation. PMID 32282198 DOI: 10.1021/Acs.Jctc.0C00057 | 0.462 | |||
2019 | Pandey P, Aytenfisu AH, MacKerell AD, Mallajosyula SS. Drude Polarizable Force Field Parametrization of Carboxylate and N-acetyl Amine Carbohydrate Derivatives. Journal of Chemical Theory and Computation. PMID 31411469 DOI: 10.1021/Acs.Jctc.9B00327 | 0.678 | |||
2019 | Pandey P, Mallajosyula SS. Elucidating the role of key structural motifs in antifreeze glycoproteins. Physical Chemistry Chemical Physics : Pccp. PMID 30702099 DOI: 10.1039/C8Cp06743K | 0.685 | |||
2018 | Pandey P, Patel V, George NV, Mallajosyula SS. KELM-CPPpred: Kernel Extreme Learning Machine Based Prediction Model for Cell-Penetrating Peptides. Journal of Proteome Research. PMID 30032609 DOI: 10.1021/Acs.Jproteome.8B00322 | 0.664 | |||
2016 | Pandey P, Mallajosyula SS. Influence of Polarization on Carbohydrate Hydration: A Comparative Study Using Additive and Polarizable Force Fields. The Journal of Physical Chemistry. B. PMID 27266974 DOI: 10.1021/Acs.Jpcb.6B05546 | 0.686 | |||
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