Xin-Jian He - Publications

Affiliations: 
NIBS (Beijing, China), Beijing, Beijing Shi, China 

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Shang JY, Lu YJ, Cai XW, Su YN, Feng C, Li L, Chen S, He XJ. COMPASS functions as a module of the INO80 chromatin remodeling complex to mediate histone H3K4 methylation in Arabidopsis. The Plant Cell. PMID 34270751 DOI: 10.1093/plcell/koab187  1
2021 Feng C, Cai XW, Su YN, Li L, Chen S, He XJ. Arabidopsis RPD3-like histone deacetylases form multiple complexes involved in stress response. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34144927 DOI: 10.1016/j.jgg.2021.04.004  1
2021 Zhou JX, Du P, Liu ZW, Feng C, Cai XW, He XJ. FVE promotes RNA-directed DNA methylation by facilitating the association of RNA polymerase V with chromatin. The Plant Journal : For Cell and Molecular Biology. PMID 33942410 DOI: 10.1111/tpj.15302  1
2021 Wu CJ, Liu ZZ, Wei L, Zhou JX, Cai XW, Su YN, Li L, Chen S, He XJ. Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. Molecular Plant. PMID 33737195 DOI: 10.1016/j.molp.2021.03.014  1
2021 Qian F, Zhao QY, Zhang TN, Li YL, Su YN, Li L, Sui JH, Chen S, He XJ. A histone H3K27me3 reader cooperates with a family of PHD finger-containing proteins to regulate flowering time in Arabidopsis. Journal of Integrative Plant Biology. PMID 33433058 DOI: 10.1111/jipb.13067  1
2020 Liu ZW, Zhao N, Su YN, Chen SS, He XJ. Publisher Correction: Exogenously overexpressed intronic long noncoding RNAs activate host gene expression by affecting histone modification in Arabidopsis. Scientific Reports. 10: 22409. PMID 33361771 DOI: 10.1038/s41598-020-79079-3  1
2020 Guo J, Wei L, Chen SS, Cai XW, Su YN, Li L, Chen S, He XJ. The CBP/p300 histone acetyltransferases function as plant-specific MEDIATOR subunits in Arabidopsis. Journal of Integrative Plant Biology. PMID 33325122 DOI: 10.1111/jipb.13052  1
2020 Ning YQ, Liu N, Lan KK, Su YN, Li L, Chen S, He XJ. DREAM complex suppresses DNA methylation maintenance genes and precludes DNA hypermethylation. Nature Plants. PMID 32661276 DOI: 10.1038/s41477-020-0710-7  1
2020 Zhou HR, Lin RN, Huang HW, Li L, Cai T, Zhu JK, Chen S, He XJ. The CCR4-NOT complex component NOT1 regulates RNA-directed DNA methylation and transcriptional silencing by facilitating Pol IV-dependent siRNA production. The Plant Journal : For Cell and Molecular Biology. PMID 32412137 DOI: 10.1111/Tpj.14818  1
2020 Gu BW, Tan LM, Zhang CJ, Hou XM, Cai XW, Chen S, He XJ. FHA2 is a plant-specific ISWI subunit responsible for stamen development and plant fertility. Journal of Integrative Plant Biology. PMID 32396248 DOI: 10.1111/jipb.12945  1
2020 Tan LM, Liu R, Gu BW, Zhang CJ, Luo J, Guo J, Wang Y, Chen L, Du X, Li S, Shao CR, Su YN, Cai XW, Lin RN, Li L, ... ... He XJ, et al. Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis. The Plant Cell. PMID 32358072 DOI: 10.1105/tpc.19.00944  1
2020 Luo YX, Hou XM, Zhang CJ, Tan LM, Shao CR, Lin RN, Su YN, Cai XW, Li L, Chen S, He XJ. A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding. The Embo Journal. e102008. PMID 32115743 DOI: 10.15252/embj.2019102008  1
2020 Liu ZW, Zhao N, Su YN, Chen SS, He XJ. Exogenously overexpressed intronic long noncoding RNAs activate host gene expression by affecting histone modification in Arabidopsis. Scientific Reports. 10: 3094. PMID 32080227 DOI: 10.1038/s41598-020-59697-7  1
2019 Ning YQ, Chen Q, Lin RN, Li YQ, Li L, Chen S, He XJ. The HDA19 histone deacetylase complex is involved in the regulation of flowering time in a photoperiod-dependent manner. The Plant Journal : For Cell and Molecular Biology. PMID 30828924 DOI: 10.1111/tpj.14229  1
2018 Zhao QQ, Lin RN, Li L, Chen S, He XJ. A methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes. Journal of Integrative Plant Biology. PMID 30589221 DOI: 10.1111/jipb.12767  1
2018 Zhang C, Du X, Tang K, Yang Z, Pan L, Zhu P, Luo J, Jiang Y, Zhang H, Wan H, Wang X, Wu F, Tao WA, He XJ, Zhang H, et al. Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin. Nature Communications. 9: 4547. PMID 30382101 DOI: 10.1038/S41467-018-06965-W  1
2018 Tan LM, Zhang CJ, Hou XM, Shao CR, Lu YJ, Zhou JX, Li YQ, Li L, Chen S, He XJ. The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing. The Embo Journal. PMID 30104406 DOI: 10.15252/embj.201798770  1
2018 Zhao QY, He XJ. Exploring potential roles for the interaction of MOM1 with SUMO and the SUMO E3 ligase-like protein PIAL2 in transcriptional silencing. Plos One. 13: e0202137. PMID 30092097 DOI: 10.1371/journal.pone.0202137  1
2018 Zhou JX, Liu ZW, Li YQ, Li L, Wang B, Chen S, He XJ. Arabidopsis PWWP domain proteins mediate H3K27 trimethylation on FLC and regulate flowering time. Journal of Integrative Plant Biology. PMID 29314758 DOI: 10.1111/jipb.12630  1
2017 Luo YX, Han YF, Zhao QY, Du JL, Dou K, Li L, Chen S, He XJ. Sumoylation of SUVR2 contributes to its role in transcriptional gene silencing. Science China. Life Sciences. PMID 28895115 DOI: 10.1007/s11427-017-9146-2  1
2017 Yang R, Zheng Z, Chen Q, Yang L, Huang H, Miki D, Wu W, Zeng L, Liu J, Zhou JX, Ogas J, Zhu JK, He XJ, Zhang H. The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci. Genome Biology. 18: 103. PMID 28569170 DOI: 10.1186/S13059-017-1226-Y  1
2017 Wang L, Kong D, Lv Q, Niu GQ, Han T, Zhao X, Meng S, Cheng Q, Guo S, Du J, Wu Z, Wang J, Bao F, Hu Y, Pan X, ... ... He XJ, et al. Tetrahydrofolate modulates Floral Transition through Epigenetic Silencing. Plant Physiology. PMID 28450424 DOI: 10.1104/pp.16.01750  1
2016 Zhang CJ, Hou XM, Tan LM, Shao CR, Huang HW, Li YQ, Li L, Cai T, Chen S, He XJ. The Arabidopsis acetylated histone-binding protein BRAT1 forms a complex with BRP1 and prevents transcriptional silencing. Nature Communications. 7: 11715. PMID 27273316 DOI: 10.1038/ncomms11715  1
2016 Liu ZW, Zhou JX, Huang HW, Li YQ, Shao CR, Li L, Cai T, Chen S, He XJ. Two Components of the RNA-Directed DNA Methylation Pathway Associate with MORC6 and Silence Loci Targeted by MORC6 in Arabidopsis. Plos Genetics. 12: e1006026. PMID 27171427 DOI: 10.1371/journal.pgen.1006026  1
2016 Han YF, Zhao QY, Dang LL, Luo YX, Chen SS, Shao CR, Huang HW, Li YQ, Li L, Cai T, Chen S, He XJ. The SUMO E3 ligase-like proteins PIAL1 and PIAL2 interact with MOM1 and form a novel complex required for transcriptional silencing. The Plant Cell. PMID 27113777 DOI: 10.1105/tpc.15.00997  1
2015 Ye R, Chen Z, Lian B, Rowley MJ, Xia N, Chai J, Li Y, He XJ, Wierzbicki AT, Qi Y. A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis. Molecular Cell. PMID 26711010 DOI: 10.1016/J.Molcel.2015.11.015  1
2015 Chan Z, Wang Y, Cao M, Gong Y, Mu Z, Wang H, Hu Y, Deng X, He XJ, Zhu JK. RDM4 modulates cold stress resistance in Arabidopsis partially through the CBF-mediated pathway. The New Phytologist. PMID 26522658 DOI: 10.1111/Nph.13727  1
2015 Wang J, Telese F, Tan Y, Li W, Jin C, He X, Basnet H, Ma Q, Merkurjev D, Zhu X, Liu Z, Zhang J, Ohgi K, Taylor H, White RR, et al. LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control. Nature Neuroscience. PMID 26214369 DOI: 10.1038/Nn.4069  0.44
2015 Li W, Hu Y, Oh S, Ma Q, Merkurjev D, Song X, Zhou X, Liu Z, Tanasa B, He X, Chen AY, Ohgi K, Zhang J, Liu W, Rosenfeld MG. Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation. Molecular Cell. 59: 188-202. PMID 26166704 DOI: 10.1016/J.Molcel.2015.06.002  0.44
2015 Han YF, Huang HW, Li L, Cai T, Chen S, He XJ. The Cytosolic Iron-Sulfur Cluster Assembly Protein MMS19 Regulates Transcriptional Gene Silencing, DNA Repair, and Flowering Time in Arabidopsis. Plos One. 10: e0129137. PMID 26053632 DOI: 10.1371/journal.pone.0129137  1
2015 Du JL, Zhang SW, Huang HW, Cai T, Li L, Chen S, He XJ. The Splicing Factor PRP31 Is Involved in Transcriptional Gene Silencing and Stress Response in Arabidopsis. Molecular Plant. 8: 1053-68. PMID 25684655 DOI: 10.1016/j.molp.2015.02.003  1
2015 Du JL, Zhang SW, Huang HW, Cai T, Li L, Chen S, He XJ. The Splicing Factor PRP31 Is Involved in Transcriptional Gene Silencing and Stress Response in Arabidopsis. Molecular Plant. 8: 1053-68. PMID 25684655 DOI: 10.1016/j.molp.2015.02.003  1
2015 Ning YQ, Ma ZY, Huang HW, Mo H, Zhao TT, Li L, Cai T, Chen S, Ma L, He XJ. Two novel NAC transcription factors regulate gene expression and flowering time by associating with the histone demethylase JMJ14. Nucleic Acids Research. 43: 1469-84. PMID 25578968 DOI: 10.1093/nar/gku1382  1
2015 Ning YQ, Ma ZY, Huang HW, Mo H, Zhao TT, Li L, Cai T, Chen S, Ma L, He XJ. Two novel NAC transcription factors regulate gene expression and flowering time by associating with the histone demethylase JMJ14. Nucleic Acids Research. 43: 1469-84. PMID 25578968 DOI: 10.1093/nar/gku1382  1
2014 Han YF, Dou K, Ma ZY, Zhang SW, Huang HW, Li L, Cai T, Chen S, Zhu JK, He XJ. SUVR2 is involved in transcriptional gene silencing by associating with SNF2-related chromatin-remodeling proteins in Arabidopsis. Cell Research. 24: 1445-65. PMID 25420628 DOI: 10.1038/Cr.2014.156  1
2014 He XJ, Ma ZY, Liu ZW. Non-coding RNA transcription and RNA-directed DNA methylation in Arabidopsis. Molecular Plant. 7: 1406-1414. PMID 24966349 DOI: 10.1093/mp/ssu075  1
2014 Liu ZW, Shao CR, Zhang CJ, Zhou JX, Zhang SW, Li L, Chen S, Huang HW, Cai T, He XJ. The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci. Plos Genetics. 10: e1003948. PMID 24465213 DOI: 10.1371/journal.pgen.1003948  1
2013 Huang CF, Miki D, Tang K, Zhou HR, Zheng Z, Chen W, Ma ZY, Yang L, Zhang H, Liu R, He XJ, Zhu JK. A Pre-mRNA-splicing factor is required for RNA-directed DNA methylation in Arabidopsis. Plos Genetics. 9: e1003779. PMID 24068953 DOI: 10.1371/Journal.Pgen.1003779  1
2013 Zhou HR, Zhang FF, Ma ZY, Huang HW, Jiang L, Cai T, Zhu JK, Zhang C, He XJ. Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis. The Plant Cell. 25: 2545-59. PMID 23881414 DOI: 10.1105/Tpc.113.114678  1
2013 Dou K, Huang CF, Ma ZY, Zhang CJ, Zhou JX, Huang HW, Cai T, Tang K, Zhu JK, He XJ. The PRP6-like splicing factor STA1 is involved in RNA-directed DNA methylation by facilitating the production of Pol V-dependent scaffold RNAs. Nucleic Acids Research. 41: 8489-502. PMID 23877244 DOI: 10.1093/Nar/Gkt639  1
2013 Zhang H, Ma ZY, Zeng L, Tanaka K, Zhang CJ, Ma J, Bai G, Wang P, Zhang SW, Liu ZW, Cai T, Tang K, Liu R, Shi X, He XJ, et al. DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proceedings of the National Academy of Sciences of the United States of America. 110: 8290-5. PMID 23637343 DOI: 10.1073/pnas.1300585110  1
2013 Zhang CJ, Zhou JX, Liu J, Ma ZY, Zhang SW, Dou K, Huang HW, Cai T, Liu R, Zhu JK, He XJ. The splicing machinery promotes RNA-directed DNA methylation and transcriptional silencing in Arabidopsis. The Embo Journal. 32: 1128-40. PMID 23524848 DOI: 10.1038/Emboj.2013.49  1
2012 Zhang CJ, Ning YQ, Zhang SW, Chen Q, Shao CR, Guo YW, Zhou JX, Li L, Chen S, He XJ. IDN2 and its paralogs form a complex required for RNA-directed DNA methylation. Plos Genetics. 8: e1002693. PMID 22570638 DOI: 10.1371/journal.pgen.1002693  1
2012 Zhang CJ, Ning YQ, Zhang SW, Chen Q, Shao CR, Guo YW, Zhou JX, Li L, Chen S, He XJ. IDN2 and its paralogs form a complex required for RNA-directed DNA methylation. Plos Genetics. 8: e1002693. PMID 22570638 DOI: 10.1371/journal.pgen.1002693  1
2011 Liu J, Bai G, Zhang C, Chen W, Zhou J, Zhang S, Chen Q, Deng X, He XJ, Zhu JK. An atypical component of RNA-directed DNA methylation machinery has both DNA methylation-dependent and -independent roles in locus-specific transcriptional gene silencing. Cell Research. 21: 1691-700. PMID 22064704 DOI: 10.1038/Cr.2011.173  1
2011 He XJ, Chen T, Zhu JK. Regulation and function of DNA methylation in plants and animals. Cell Research. 21: 442-65. PMID 21321601 DOI: 10.1038/cr.2011.23  1
2010 Zheng Z, Xing Y, He XJ, Li W, Hu Y, Yadav SK, Oh J, Zhu JK. An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 62: 92-9. PMID 20059743 DOI: 10.1111/J.1365-313X.2010.04130.X  1
2009 He XJ, Hsu YF, Zhu S, Liu HL, Pontes O, Zhu J, Cui X, Wang CS, Zhu JK. A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development. Genes & Development. 23: 2717-22. PMID 19903758 DOI: 10.1101/Gad.1851809  1
2009 He XJ, Hsu YF, Zhu S, Wierzbicki AT, Pontes O, Pikaard CS, Liu HL, Wang CS, Jin H, Zhu JK. An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein. Cell. 137: 498-508. PMID 19410546 DOI: 10.1016/J.Cell.2009.04.028  1
2009 He XJ, Mulford KE, Fassler JS. Oxidative stress function of the Saccharomyces cerevisiae Skn7 receiver domain. Eukaryotic Cell. 8: 768-78. PMID 19304952 DOI: 10.1128/EC.00021-09  0.04
2009 He XJ, Mulford KE, Fassler JS. Oxidative stress function of the Saccharomyces cerevisiae Skn7 receiver domain. Eukaryotic Cell. 8: 768-78. PMID 19304952 DOI: 10.1128/EC.00021-09  0.04
2009 He XJ, Hsu YF, Pontes O, Zhu J, Lu J, Bressan RA, Pikaard C, Wang CS, Zhu JK. NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation. Genes & Development. 23: 318-30. PMID 19204117 DOI: 10.1101/Gad.1765209  1
2009 Yu WZ, Qiu DH, Song F, Liu L, Liu SM, He XJ, Jin YW, Zhang YL, Zou HY, He J, Lei Q, Liu XW. [Characteristics of the PAH gene mutation in Chinese patients with phenylketonuria in Xinjiang]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 26: 26-30. PMID 19199246 DOI: 10.3760/cma.j.issn.1003-9406.2009.01.006  0.6
2009 Yu WZ, Qiu DH, Song F, Liu L, Liu SM, He XJ, Jin YW, Zhang YL, Zou HY, He J, Lei Q, Liu XW. [Characteristics of the PAH gene mutation in Chinese patients with phenylketonuria in Xinjiang]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 26: 26-30. PMID 19199246 DOI: 10.3760/cma.j.issn.1003-9406.2009.01.006  0.6
2008 Liu CQ, Ma L, Tang LM, He XJ, Wei SF, Wang SX, Zhang GY. [A randomized controlled study on the efficacy of inhaled nitric oxide in treatment of neonates with meconium aspiration syndrome]. Zhonghua Er Ke Za Zhi. Chinese Journal of Pediatrics. 46: 224-8. PMID 19099714  1
2008 Liu CQ, Ma L, Tang LM, He XJ, Wei SF, Wang SX, Zhang GY. [A randomized controlled study on the efficacy of inhaled nitric oxide in treatment of neonates with meconium aspiration syndrome]. Zhonghua Er Ke Za Zhi. Chinese Journal of Pediatrics. 46: 224-8. PMID 19099714  1
2008 Li WX, Oono Y, Zhu J, He XJ, Wu JM, Iida K, Lu XY, Cui X, Jin H, Zhu JK. The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. The Plant Cell. 20: 2238-51. PMID 18682547 DOI: 10.1105/Tpc.108.059444  1
2006 Cao WH, Liu J, He XJ, Mu RL, Zhou HL, Chen SY, Zhang JS. Modulation of ethylene responses affects plant salt-stress responses. Plant Physiology. 143: 707-19. PMID 17189334 DOI: 10.1104/Pp.106.094292  0.4
2006 Cao WH, Liu J, He XJ, Mu RL, Zhou HL, Chen SY, Zhang JS. Modulation of ethylene responses affects plant salt-stress responses. Plant Physiology. 143: 707-19. PMID 17189334 DOI: 10.1104/Pp.106.094292  0.4
2005 He XJ, Mu RL, Cao WH, Zhang ZG, Zhang JS, Chen SY. AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development Plant Journal. 44: 903-916. PMID 16359384 DOI: 10.1111/J.1365-313X.2005.02575.X  1
2005 He XJ, Mu RL, Cao WH, Zhang ZG, Zhang JS, Chen SY. AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development Plant Journal. 44: 903-916. PMID 16359384 DOI: 10.1111/J.1365-313X.2005.02575.X  1
2005 He XJ, Fassler JS. Identification of novel Yap1p and Skn7p binding sites involved in the oxidative stress response of Saccharomyces cerevisiae. Molecular Microbiology. 58: 1454-67. PMID 16313629 DOI: 10.1111/j.1365-2958.2005.04917.x  0.08
2005 He XJ, Fassler JS. Identification of novel Yap1p and Skn7p binding sites involved in the oxidative stress response of Saccharomyces cerevisiae. Molecular Microbiology. 58: 1454-67. PMID 16313629 DOI: 10.1111/j.1365-2958.2005.04917.x  0.08
2005 Zhang WK, Shen YG, He XJ, Du BX, Xie ZM, Luo GZ, Zhang JS, Chen SY. Characterization of a novel cell cycle-related gene from Arabidopsis Journal of Experimental Botany. 56: 807-816. PMID 15689342 DOI: 10.1093/Jxb/Eri075  1
2005 Zhang WK, Shen YG, He XJ, Du BX, Xie ZM, Luo GZ, Zhang JS, Chen SY. Characterization of a novel cell cycle-related gene from Arabidopsis Journal of Experimental Botany. 56: 807-816. PMID 15689342 DOI: 10.1093/Jxb/Eri075  1
2003 Wang YJ, Zhang ZG, He XJ, Zhou HL, Wen YX, Dai JX, Zhang JS, Chen SY. A rice transcription factor OsbHLH1 is involved in cold stress response. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 107: 1402-9. PMID 12920519 DOI: 10.1007/S00122-003-1378-X  1
2003 Wang YJ, Zhang ZG, He XJ, Zhou HL, Wen YX, Dai JX, Zhang JS, Chen SY. A rice transcription factor OsbHLH1 is involved in cold stress response. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 107: 1402-9. PMID 12920519 DOI: 10.1007/S00122-003-1378-X  1
2002 Wang JF, He XJ, Zhang HS, Chen ZY. [Genetic analysis of blast resistance in japonica rice landrace heikezijing from Taihu region]. Yi Chuan Xue Bao = Acta Genetica Sinica. 29: 803-7. PMID 12561228  0.72
2002 Xie C, Zhang ZG, Zhang JS, He XJ, Cao WH, He SJ, Chen SY. Spatial expression and characterization of a putative ethylene receptor protein NTHK1 in tobacco. Plant & Cell Physiology. 43: 810-5. PMID 12154144 DOI: 10.1093/Pcp/Pcf095  1
2002 He X, Chen J, Zhang Z, Zhang J, Chen S. Identification of salt-stress responsive genes in rice (Oryza sativa L.) by cDNA array Science in China, Series C: Life Sciences. 45: 477-484. DOI: 10.1360/02yc9052  1
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