Jianbing Yan - Publications

Affiliations: 
Huazhong Agricultural University 

138 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Li P, Zhang Z, Xiao G, Zhao Z, He K, Yang X, Pan Q, Mi G, Jia Z, Yan J, Chen F, Yuan L. Genomic basis determining root system architecture in maize. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 137: 102. PMID 38607439 DOI: 10.1007/s00122-024-04606-z  0.507
2024 Zhang Y, Wang M, Li Z, Yang X, Li K, Xie A, Dong F, Wang S, Yan J, Liu J. An overview of detecting gene-trait associations by integrating GWAS summary statistics and eQTLs. Science China. Life Sciences. PMID 38568343 DOI: 10.1007/s11427-023-2522-8  0.395
2024 Liu L, Zhan J, Yan J. Engineering the future cereal crops with big biological data: towards an intelligence-driven breeding by design. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 38531485 DOI: 10.1016/j.jgg.2024.03.005  0.305
2023 Yang N, Wang Y, Liu X, Jin M, Vallebueno-Estrada M, Calfee E, Chen L, Dilkes BP, Gui S, Fan X, Harper TK, Kennett DJ, Li W, Lu Y, Ding J, ... ... Yan J, et al. Two teosintes made modern maize. Science (New York, N.Y.). 382: eadg8940. PMID 38033071 DOI: 10.1126/science.adg8940  0.389
2023 Jian LM, Xiao YJ, Yan JB. domestication: a new way for crop design and breeding. Yi Chuan = Hereditas. 45: 741-753. PMID 37731229 DOI: 10.16288/j.yczz.23-194  0.372
2023 Jin M, Liu H, Liu X, Guo T, Guo J, Yin Y, Ji Y, Li Z, Zhang J, Wang X, Qiao F, Xiao Y, Zan Y, Yan J. Complex genetic architecture underlying the plasticity of maize agronomic traits. Plant Communications. 100473. PMID 36642074 DOI: 10.1016/j.xplc.2022.100473  0.43
2023 Gui S, Martinez-Rivas FJ, Wen W, Meng M, Yan J, Usadel B, Fernie AR. Going broad and deep: sequencing-driven insights into plant physiology, evolution, and crop domestication. The Plant Journal : For Cell and Molecular Biology. 113: 446-459. PMID 36534120 DOI: 10.1111/tpj.16070  0.335
2022 Han L, Zhong W, Qian J, Jin M, Tian P, Zhu W, Zhang H, Sun Y, Feng JW, Liu X, Chen G, Farid B, Li R, Xiong Z, Tian Z, ... ... Yan J, et al. A multi-omics integrative network map of maize. Nature Genetics. PMID 36581701 DOI: 10.1038/s41588-022-01262-1  0.31
2022 Ren W, Zhao L, Liang J, Wang L, Chen L, Li P, Liu Z, Li X, Zhang Z, Li J, He K, Zhao Z, Ali F, Mi G, Yan J, et al. Genome-wide dissection of changes in maize root system architecture during modern breeding. Nature Plants. PMID 36396706 DOI: 10.1038/s41477-022-01274-z  0.48
2022 Chen G, Xiao Y, Dai S, Dai Z, Wang X, Li B, Jaqueth JS, Li W, Lai Z, Ding J, Yan J. Genetic basis of resistance to southern corn leaf blight in the maize multi-parent population and diversity panel. Plant Biotechnology Journal. PMID 36383026 DOI: 10.1111/pbi.13967  0.46
2022 Chen L, Luo J, Jin M, Yang N, Liu X, Peng Y, Li W, Phillips A, Cameron B, Bernal JS, Rellán-Álvarez R, Sawers RJH, Liu Q, Yin Y, Ye X, ... Yan J, ... ... Yan J, et al. Genome sequencing reveals evidence of adaptive variation in the genus Zea. Nature Genetics. PMID 36266506 DOI: 10.1038/s41588-022-01184-y  0.499
2022 Sun X, Xiang Y, Dou N, Zhang H, Pei S, Franco AV, Menon M, Monier B, Ferebee T, Liu T, Liu S, Gao Y, Wang J, Terzaghi W, Yan J, et al. The role of transposon inverted repeats in balancing drought tolerance and yield-related traits in maize. Nature Biotechnology. PMID 36229611 DOI: 10.1038/s41587-022-01470-4  0.429
2022 Gui S, Wei W, Jiang C, Luo J, Chen L, Wu S, Li W, Wang Y, Li S, Yang N, Li Q, Fernie AR, Yan J. A pan-Zea genome map for enhancing maize improvement. Genome Biology. 23: 178. PMID 35999561 DOI: 10.1186/s13059-022-02742-7  0.414
2022 Wang Y, Li W, Wang L, Yan J, Lu G, Yang N, Xu J, Wang Y, Gui S, Chen G, Li S, Wu C, Guo T, Xiao Y, Warburton ML, ... ... Yan J, et al. Three types of genes underlying the Gametophyte factor1 locus cause unilateral cross incompatibility in maize. Nature Communications. 13: 4498. PMID 35922428 DOI: 10.1038/s41467-022-32180-9  0.312
2022 Jian L, Yan J, Liu J. De novo Domestication in the Multi-omics Era. Plant & Cell Physiology. PMID 35762778 DOI: 10.1093/pcp/pcac077  0.4
2022 Chen W, Chen L, Zhang X, Yang N, Guo J, Wang M, Ji S, Zhao X, Yin P, Cai L, Xu J, Zhang L, Han Y, Xiao Y, Xu G, ... ... Yan J, et al. Convergent selection of a WD40 protein that enhances grain yield in maize and rice. Science (New York, N.Y.). 375: eabg7985. PMID 35324310 DOI: 10.1126/science.abg7985  0.39
2022 Yang W, Guo T, Luo J, Zhang R, Zhao J, Warburton ML, Xiao Y, Yan J. Target-oriented prioritization: targeted selection strategy by integrating organismal and molecular traits through predictive analytics in breeding. Genome Biology. 23: 80. PMID 35292095 DOI: 10.1186/s13059-022-02650-w  0.358
2021 Luo Y, Zhang M, Liu Y, Liu J, Li W, Chen G, Peng Y, Jin M, Wei W, Jian L, Yan J, Fernie AR, Yan J. Genetic variation in YIGE1 contributes to ear length and grain yield in maize. The New Phytologist. PMID 34837389 DOI: 10.1111/nph.17882  0.483
2021 Cheng Q, Jiang S, Xu F, Wang Q, Xiao Y, Zhang R, Zhao J, Yan J, Ma C, Wang X. Genome optimization via virtual simulation to accelerate maize hybrid breeding. Briefings in Bioinformatics. PMID 34676389 DOI: 10.1093/bib/bbab447  0.354
2021 Zhu F, Alseekh S, Koper K, Tong H, Nikoloski Z, Naake T, Liu H, Yan J, Brotman Y, Wen W, Maeda H, Cheng Y, Fernie AR. Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis. The Plant Cell. PMID 34623442 DOI: 10.1093/plcell/koab251  0.307
2021 Yan J, Xu Y, Cheng Q, Jiang S, Wang Q, Xiao Y, Ma C, Yan J, Wang X. LightGBM: accelerated genomically designed crop breeding through ensemble learning. Genome Biology. 22: 271. PMID 34544450 DOI: 10.1186/s13059-021-02492-y  0.311
2021 Zhang F, Wu J, Sade N, Wu S, Egbaria A, Fernie AR, Yan J, Qin F, Chen W, Brotman Y, Dai M. Genomic basis underlying the metabolome-mediated drought adaptation of maize. Genome Biology. 22: 260. PMID 34488839 DOI: 10.1186/s13059-021-02481-1  0.319
2021 Wu X, Feng H, Wu D, Yan S, Zhang P, Wang W, Zhang J, Ye J, Dai G, Fan Y, Li W, Song B, Geng Z, Yang W, Chen G, ... ... Yan J, et al. Using high-throughput multiple optical phenotyping to decipher the genetic architecture of maize drought tolerance. Genome Biology. 22: 185. PMID 34162419 DOI: 10.1186/s13059-021-02377-0  0.339
2021 Xiao Y, Jiang S, Cheng Q, Wang X, Yan J, Zhang R, Qiao F, Ma C, Luo J, Li W, Liu H, Yang W, Song W, Meng Y, Warburton ML, ... ... Yan J, et al. The genetic mechanism of heterosis utilization in maize improvement. Genome Biology. 22: 148. PMID 33971930 DOI: 10.1186/s13059-021-02370-7  0.352
2021 Liang Y, Liu HJ, Yan J, Tian F. Natural Variation in Crops: Realized Understanding, Continuing Promise. Annual Review of Plant Biology. PMID 33481630 DOI: 10.1146/annurev-arplant-080720-090632  0.37
2021 Yang N, Yan J. New genomic approaches for enhancing maize genetic improvement. Current Opinion in Plant Biology. 60: 101977. PMID 33418269 DOI: 10.1016/j.pbi.2020.11.002  0.39
2021 Li W, Yu Y, Wang L, Luo Y, Peng Y, Xu Y, Liu X, Wu S, Jian L, Xu J, Xiao Y, Yan J. The genetic architecture of the dynamic changes in grain moisture in maize. Plant Biotechnology Journal. PMID 33386670 DOI: 10.1111/pbi.13541  0.433
2020 Liu J, Fernie AR, Yan J. The Past, Present, and Future of Maize Improvement: Domestication, Genomics, and Functional Genomic Routes toward Crop Enhancement. Plant Communications. 1: 100010. PMID 33404535 DOI: 10.1016/j.xplc.2019.100010  0.452
2020 Qin X, Tian S, Zhang W, Dong X, Ma C, Wang Y, Yan J, Yue B. Q , an F-box gene affecting maize tassel branch number by a dominant model. Plant Biotechnology Journal. PMID 33382512 DOI: 10.1111/pbi.13540  0.312
2020 Liu N, Du Y, Warburton ML, Xiao Y, Yan J. Phenotypic Plasticity Contributes to Maize Adaptation and Heterosis. Molecular Biology and Evolution. PMID 33212480 DOI: 10.1093/molbev/msaa283  0.451
2020 Liu J, Fernie AR, Yan J. Crop breeding - From experience-based selection to precision design. Journal of Plant Physiology. 256: 153313. PMID 33202375 DOI: 10.1016/j.jplph.2020.153313  0.353
2020 Qin X, Zhang W, Dong X, Tian S, Zhang P, Zhao Y, Wang Y, Yan J, Yue B. Identification of fertility-related genes for maize CMS-S via Bulked Segregant RNA-Seq. Peerj. 8: e10015. PMID 33062436 DOI: 10.7717/peerj.10015  0.319
2020 Liu S, Li C, Wang H, Wang S, Yang S, Liu X, Yan J, Li B, Beatty M, Zastrow-Hayes G, Song S, Qin F. Mapping regulatory variants controlling gene expression in drought response and tolerance in maize. Genome Biology. 21: 163. PMID 32631406 DOI: 10.1186/S13059-020-02069-1  0.362
2020 Gui S, Yang L, Li J, Luo J, Xu X, Yuan J, Chen L, Li W, Yang X, Wu S, Li S, Wang Y, Zhu Y, Gao Q, Yang N, ... Yan J, et al. ZEAMAP, a Comprehensive Database Adapted to the Maize Multi-Omics Era. Iscience. 23: 101241. PMID 32629608 DOI: 10.1016/j.isci.2020.101241  0.442
2020 Luo J, Wei C, Liu H, Cheng S, Xiao Y, Wang X, Yan J, Liu J. MaizeCUBIC: a comprehensive variation database for a maize synthetic population. Database : the Journal of Biological Databases and Curation. 2020. PMID 32548639 DOI: 10.1093/database/baaa044  0.471
2020 Luo C, Fernie AR, Yan J. Single-Cell Genomics and Epigenomics: Technologies and Applications in Plants. Trends in Plant Science. PMID 32532595 DOI: 10.1016/j.tplants.2020.04.016  0.302
2020 Huang J, Lu G, Liu L, Raihan MS, Xu J, Jian L, Zhao L, Tran TM, Zhang Q, Liu J, Li W, Wei C, Braun DM, Li Q, Fernie AR, ... ... Yan J, et al. The kernel size-related quantitative trait locus qKW9 encodes a pentatricopeptide repeat protein that affects photosynthesis and grain filling. Plant Physiology. PMID 32482908 DOI: 10.1104/Pp.20.00374  0.395
2020 Wang S, Tian L, Liu H, Li X, Zhang J, Chen X, Jia X, Zheng X, Wu S, Chen Y, Yan J, Wu L. Large-scale Discovery of Non-conventional Peptides in Maize and Arabidopsis Through an Integrated Peptidogenomic Pipeline. Molecular Plant. PMID 32445888 DOI: 10.1016/j.molp.2020.05.012  0.304
2020 Li H, Wang M, Li W, He L, Zhou Y, Zhu J, Che R, Warburton ML, Yang X, Yan J. Genetic variants and underlying mechanisms influencing variance heterogeneity in maize. The Plant Journal : For Cell and Molecular Biology. PMID 32344461 DOI: 10.1111/tpj.14786  0.45
2020 Liu H, Jian L, Xu J, Zhang Q, Zhang M, Jin M, Peng Y, Yan J, Han B, Liu J, Gao F, Liu X, Huang L, Wei W, Ding Y, ... ... Yan J, et al. High-Throughput CRISPR/Cas9 Mutagenesis Streamlines Trait Gene Identification in Maize. The Plant Cell. PMID 32102844 DOI: 10.1105/Tpc.19.00934  0.52
2020 Yang W, Feng H, Zhang X, Zhang J, Doonan JH, Batchelor WD, Xiong L, Yan J. Crop Phenomics and High-throughput Phenotyping: Past Decades, Current Challenges and Future Perspectives. Molecular Plant. PMID 31981735 DOI: 10.1016/J.Molp.2020.01.008  0.425
2020 Liu HJ, Wang X, Xiao Y, Luo J, Qiao F, Yang W, Zhang R, Meng Y, Sun J, Yan S, Peng Y, Niu L, Jian L, Song W, Yan J, ... ... Yan J, et al. CUBIC: an atlas of genetic architecture promises directed maize improvement. Genome Biology. 21: 20. PMID 31980033 DOI: 10.1186/s13059-020-1930-x  0.459
2019 Fang H, Fu X, Wang Y, Xu J, Feng H, Li W, Xu J, Orawan J, Zhang X, Zhang L, Yang N, Xu G, Wang M, Li X, Li J, ... Yan J, et al. Genetic basis of kernel nutritional traits during maize domestication and improvement. The Plant Journal : For Cell and Molecular Biology. PMID 31529523 DOI: 10.1111/tpj.14539  0.446
2019 Peng Y, Xiong D, Zhao L, Ouyang W, Wang S, Sun J, Zhang Q, Guan P, Xie L, Li W, Li G, Yan J, Li X. Chromatin interaction maps reveal genetic regulation for quantitative traits in maize. Nature Communications. 10: 2632. PMID 31201335 DOI: 10.1038/s41467-019-10602-5  0.371
2019 Zhan W, Liu J, Pan Q, Wang H, Yan S, Li K, Deng M, Li W, Liu N, Kong Q, Fernie AR, Yan J. An allele of ZmPORB2 encoding a protochlorophyllide oxidoreductase promotes tocopherol accumulation in both leaves and kernels of maize. The Plant Journal : For Cell and Molecular Biology. PMID 31169939 DOI: 10.1111/tpj.14432  0.411
2019 Yang N, Liu J, Gao Q, Gui S, Chen L, Yang L, Huang J, Deng T, Luo J, He L, Wang Y, Xu P, Peng Y, Shi Z, Lan L, ... ... Yan J, et al. Genome assembly of a tropical maize inbred line provides insights into structural variation and crop improvement. Nature Genetics. 51: 1052-1059. PMID 31152161 DOI: 10.1038/S41588-019-0427-6  0.546
2019 Li K, Wen W, Alseekh S, Yang X, Guo H, Li W, Wang L, Pan Q, Zhan W, Liu J, Li Y, Wu X, Brotman Y, Willmitzer L, Li J, ... ... Yan J, et al. Large-scale metabolite QTL analysis provides new insights for high-quality maize improvement. The Plant Journal : For Cell and Molecular Biology. PMID 30888713 DOI: 10.1111/Tpj.14317  0.48
2019 Li C, Song W, Luo Y, Gao S, Zhang R, Shi Z, Wang X, Wang R, Wang F, Wang J, Zhao Y, Su A, Wang S, Li X, Luo M, ... ... Yan J, et al. The HuangZaoSi maize genome provides insights into genomic variation and improvement history of maize. Molecular Plant. PMID 30807824 DOI: 10.1016/j.molp.2019.02.009  0.417
2019 Li H, Thrash A, Tang JD, He L, Yan J, Warburton ML. Leveraging GWAS data to identify metabolic pathways and networks involved in maize lipid biosynthesis. The Plant Journal : For Cell and Molecular Biology. PMID 30742331 DOI: 10.1111/tpj.14282  0.353
2018 Sun J, Liu H, Liu J, Cheng S, Peng Y, Zhang Q, Yan J, Liu HJ, Chen LL. CRISPR-Local: a local single-guide RNA (sgRNA) design tool for non-reference plant genomes. Bioinformatics (Oxford, England). PMID 30500879 DOI: 10.1093/bioinformatics/bty970  0.302
2018 Liu HJ, Yan J. Crop genome-wide association study: A harvest of biological relevance. The Plant Journal : For Cell and Molecular Biology. PMID 30368955 DOI: 10.1111/tpj.14139  0.399
2018 Ju C, Zhang W, Liu Y, Gao Y, Wang X, Yan J, Yang X, Li J. Genetic analysis of seedling root traits reveals the association of root trait with other agronomic traits in maize. Bmc Plant Biology. 18: 171. PMID 30111287 DOI: 10.1186/s12870-018-1383-5  0.461
2018 Ma H, Li G, Würschum T, Zhang Y, Zheng D, Yang X, Li J, Liu W, Yan J, Chen S. Genome-Wide Association Study of Haploid Male Fertility in Maize (.). Frontiers in Plant Science. 9: 974. PMID 30065732 DOI: 10.3389/fpls.2018.00974  0.51
2018 Chen Q, Han Y, Liu H, Wang X, Sun J, Zhao B, Li W, Tian J, Liang Y, Yan J, Yang X, Tian F. Genome-Wide Association Analyses Reveal the Importance of Alternative Splicing in Diversifying Gene Function and Regulating Phenotypic Variation in Maize. The Plant Cell. PMID 29967286 DOI: 10.1105/tpc.18.00109  0.379
2018 Liu N, Liu J, Li W, Pan Q, Liu J, Yang X, Yan J, Xiao Y. Intraspecific variation of residual heterozygosity and its utility for quantitative genetic studies in maize. Bmc Plant Biology. 18: 66. PMID 29673320 DOI: 10.1186/s12870-018-1287-4  0.497
2018 Zhang R, Xu G, Li J, Yan J, Li H, Yang X. Patterns of genomic variation in Chinese maize inbred lines and implications for genetic improvement. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 29492618 DOI: 10.1007/s00122-018-3072-z  0.358
2018 de Abreu E Lima F, Li K, Wen W, Yan J, Nikoloski Z, Willmitzer L, Brotman Y. Unraveling the lipid metabolism in maize with time-resolved multi-omics data. The Plant Journal : For Cell and Molecular Biology. PMID 29385634 DOI: 10.1111/Tpj.13833  0.321
2018 Wen W, Jin M, Li K, Liu H, Xiao Y, Zhao M, Alseekh S, Li W, de Abreu E Lima F, Brotman Y, Willmitzer L, Fernie AR, Yan J. An Integrated Multi-layered Analysis of the Metabolic Networks of Different Tissues Uncovers Key Genetic Components of Primary Metabolism in Maize. The Plant Journal : For Cell and Molecular Biology. PMID 29381266 DOI: 10.1111/Tpj.13835  0.434
2018 Wang H, Xu S, Fan Y, Liu N, Zhan W, Liu H, Xiao Y, Li K, Pan Q, Li W, Deng M, Liu J, Jin M, Yang X, Li J, ... ... Yan J, et al. Beyond pathways: genetic dissection of tocopherol content in maize kernels by combining linkage and association analyses. Plant Biotechnology Journal. PMID 29356296 DOI: 10.1111/pbi.12889  0.559
2018 Jin M, Liu X, Jia W, Liu H, Li W, Peng Y, Du Y, Wang Y, Yin Y, Zhang X, Liu Q, Deng M, Li N, Cui X, Hao D, ... Yan J, et al. ZmCOL3, a CCT gene represses flowering in maize by interfering circadian clock and activating expression of ZmCCT. Journal of Integrative Plant Biology. PMID 29319223 DOI: 10.1111/jipb.12632  0.339
2017 Yang N, Xu XW, Wang RR, Peng WL, Cai L, Song JM, Li W, Luo X, Niu L, Wang Y, Jin M, Chen L, Luo J, Deng M, Wang L, ... ... Yan J, et al. Contributions of Zea mays subspecies mexicana haplotypes to modern maize. Nature Communications. 8: 1874. PMID 29187731 DOI: 10.1038/S41467-017-02063-5  0.37
2017 Chen L, Zhang P, Fan Y, Lu Q, Li Q, Yan J, Muehlbauer GJ, Schnable PS, Dai M, Li L. Circular RNAs mediated by transposons are associated with transcriptomic and phenotypic variation in maize. The New Phytologist. PMID 29155438 DOI: 10.1111/Nph.14901  0.361
2017 Pan Q, Xu Y, Li K, Peng Y, Zhan W, Li W, Li L, Yan J. The genetic basis of plant architecture in 10 maize recombinant inbred line populations. Plant Physiology. PMID 28838954 DOI: 10.1104/pp.17.00709  0.475
2017 Liu J, Huang J, Guo H, Lan L, Wang H, Xu Y, Yang X, Li W, Tong H, Xiao Y, Pan Q, Qiao F, Raihan MS, Liu H, Zhang X, ... ... Yan J, et al. The conserved and unique genetic architecture of kernel size and weight in maize and rice. Plant Physiology. PMID 28811335 DOI: 10.1104/pp.17.00708  0.453
2017 Pan Q, Deng M, Yan J, Li L. Complexity of genetic mechanisms conferring nonuniformity of recombination in maize. Scientific Reports. 7: 1205. PMID 28446764 DOI: 10.1038/s41598-017-01240-2  0.464
2017 Deng M, Li D, Luo J, Xiao Y, Liu H, Pan Q, Zhang X, Jin M, Zhao M, Yan J. The genetic architecture of amino acids dissection by association and linkage analysis in maize. Plant Biotechnology Journal. PMID 28218981 DOI: 10.1111/pbi.12712  0.405
2017 Zhang X, Huang C, Wu D, Qiao F, Li W, Duan L, Wang K, Xiao Y, Chen G, Liu Q, Xiong L, Yang W, Yan J. High-throughput phenotyping and QTL mapping reveals the genetic architecture of maize plant growth. Plant Physiology. PMID 28153923 DOI: 10.1104/Pp.16.01516  0.48
2017 Jin M, Zhang X, Zhao M, Deng M, Du Y, Zhou Y, Wang S, Tohge T, Fernie AR, Willmitzer L, Brotman Y, Yan J, Wen W. Integrated genomics-based mapping reveals the genetics underlying maize flavonoid biosynthesis. Bmc Plant Biology. 17: 17. PMID 28100172 DOI: 10.1186/S12870-017-0972-Z  0.483
2016 Xiao Y, Liu H, Wu L, Warburton M, Yan J. Genome-wide association studies in maize: praise and stargaze. Molecular Plant. PMID 28039028 DOI: 10.1016/j.molp.2016.12.008  0.395
2016 Wang X, Wang H, Liu S, Ferjani A, Li J, Yan J, Yang X, Qin F. Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlings. Nature Genetics. PMID 27526320 DOI: 10.1038/ng.3636  0.477
2016 Liu H, Wang F, Xiao Y, Tian Z, Wen W, Zhang X, Chen X, Liu N, Li W, Liu L, Liu J, Yan J, Liu J. MODEM: multi-omics data envelopment and mining in maize. Database : the Journal of Biological Databases and Curation. 2016. PMID 27504011 DOI: 10.1093/database/baw117  0.529
2016 Liu H, Luo X, Niu L, Xiao Y, Chen L, Liu J, Wang X, Jin M, Li W, Zhang Q, Yan J. Distant eQTLs and non-coding sequences play critical roles in regulating gene expression and quantitative trait variation in maize. Molecular Plant. PMID 27381443 DOI: 10.1016/j.molp.2016.06.016  0.525
2016 Wen W, Brotman Y, Willmitzer L, Yan J, Fernie AR. Broadening Our Portfolio in the Genetic Improvement of Maize Chemical Composition. Trends in Genetics : Tig. PMID 27235112 DOI: 10.1016/J.Tig.2016.05.003  0.39
2016 Raihan MS, Liu J, Huang J, Guo H, Pan Q, Yan J. Multi-environment QTL analysis of grain morphology traits and fine mapping of a kernel-width QTL in Zheng58 × SK maize population. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 27154588 DOI: 10.1007/s00122-016-2717-z  0.551
2016 Zhang X, Warburton ML, Setter T, Liu H, Xue Y, Yang N, Yan J, Xiao Y. Genome-wide association studies of drought-related metabolic changes in maize using an enlarged SNP panel. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 27121008 DOI: 10.1007/S00122-016-2716-0  0.431
2016 Hu H, Schrag TA, Peis R, Unterseer S, Schipprack W, Chen S, Lai J, Yan J, Prasanna BM, Nair SK, Chaikam V, Rotarenco V, Shatskaya OA, Zavalishina A, Scholten S, et al. The Genetic Basis of Haploid Induction in Maize Identified with a Novel Genome-Wide Association Method. Genetics. PMID 26896330 DOI: 10.1534/genetics.115.184234  0.467
2016 Jin M, Liu H, He C, Fu J, Xiao Y, Wang Y, Xie W, Wang G, Yan J. Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variation. Scientific Reports. 6: 18936. PMID 26729541 DOI: 10.1038/srep18936  0.503
2016 Liang X, Wang K, Huang C, Zhang X, Yan J, Yang W. A high-throughput maize kernel traits scorer based on line-scan imaging Measurement: Journal of the International Measurement Confederation. 90: 453-460. DOI: 10.1016/j.measurement.2016.05.015  0.314
2015 Pan Q, Li L, Yang X, Tong H, Xu S, Li Z, Li W, Muehlbauer GJ, Li J, Yan J. Genome-wide recombination dynamics are associated with phenotypic variation in maize. The New Phytologist. PMID 26720856 DOI: 10.1111/Nph.13810  0.447
2015 Xiao Y, Tong H, Yang X, Xu S, Pan Q, Qiao F, Raihan MS, Luo Y, Liu H, Zhang X, Yang N, Wang X, Deng M, Jin M, Zhao L, ... ... Yan J, et al. Genome-wide dissection of the maize ear genetic architecture using multiple populations. The New Phytologist. PMID 26715032 DOI: 10.1111/nph.13814  0.556
2015 Wang T, Wang M, Hu S, Xiao Y, Tong H, Pan Q, Xue J, Yan J, Li J, Yang X. Genetic basis of maize kernel starch content revealed by high-density single nucleotide polymorphism markers in a recombinant inbred line population. Bmc Plant Biology. 15: 288. PMID 26654531 DOI: 10.1186/s12870-015-0675-2  0.491
2015 Liu L, Du Y, Shen X, Li M, Sun W, Huang J, Liu Z, Tao Y, Zheng Y, Yan J, Zhang Z. KRN4 Controls Quantitative Variation in Maize Kernel Row Number. Plos Genetics. 11: e1005670. PMID 26575831 DOI: 10.1371/journal.pgen.1005670  0.511
2015 Wen W, Liu H, Zhou Y, Jin M, Yang N, Li D, Luo J, Xiao Y, Pan Q, Tohge T, Fernie AR, Yan J. Combining quantitative genetics approaches with regulatory network analysis to dissect the complex metabolism of the maize kernel. Plant Physiology. PMID 26556794 DOI: 10.1104/pp.15.01444  0.436
2015 Chen G, Wang X, Hao J, Yan J, Ding J. Genome-Wide Association Implicates Candidate Genes Conferring Resistance to Maize Rough Dwarf Disease in Maize. Plos One. 10: e0142001. PMID 26529245 DOI: 10.1371/journal.pone.0142001  0.381
2015 Mao H, Wang H, Liu S, Li Z, Yang X, Yan J, Li J, Tran LP, Qin F. A transposable element in a NAC gene is associated with drought tolerance in maize seedlings. Nature Communications. 6: 8326. PMID 26387805 DOI: 10.1038/ncomms9326  0.413
2015 Ding J, Ali F, Chen G, Li H, Mahuku G, Yang N, Narro L, Magorokosho C, Makumbi D, Yan J. Genome-wide association mapping reveals novel sources of resistance to northern corn leaf blight in maize. Bmc Plant Biology. 15: 206. PMID 26289207 DOI: 10.1186/S12870-015-0589-Z  0.369
2015 Liu J, Deng M, Guo H, Raihan S, Luo J, Xu Y, Dong X, Yan J. Maize orthologs of rice GS5 and their trans-regulator are associated with kernel development. Journal of Integrative Plant Biology. PMID 26282053 DOI: 10.1111/jipb.12421  0.485
2015 Feng Y, Zheng Q, Song H, Wang Y, Wang H, Jiang L, Yan J, Zheng Y, Yue B. Multiple loci not only Rf3 involved in the restoration ability of pollen fertility, anther exsertion and pollen shedding to S type cytoplasmic male sterile in maize. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 26220224 DOI: 10.1007/s00122-015-2589-7  0.361
2015 Liu L, Du Y, Huo D, Wang M, Shen X, Yue B, Qiu F, Zheng Y, Yan J, Zhang Z. Genetic architecture of maize kernel row number and whole genome prediction. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 128: 2243-54. PMID 26188589 DOI: 10.1007/s00122-015-2581-2  0.443
2015 Wen W, Li K, Alseek S, Omranian N, Zhao L, Zhou Y, Xiao Y, Jin M, Yang N, Liu H, Florian A, Li W, Pan Q, Nikoloski Z, Yan J, et al. Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population. The Plant Cell. PMID 26187921 DOI: 10.1105/Tpc.15.00208  0.443
2015 Xing A, Gao Y, Ye L, Zhang W, Cai L, Ching A, Llaca V, Johnson B, Liu L, Yang X, Kang D, Yan J, Li J. A rare SNP mutation in Brachytic2 moderately reduces plant height and increases yield potential in maize. Journal of Experimental Botany. 66: 3791-802. PMID 25922491 DOI: 10.1093/jxb/erv182  0.325
2015 Li X, Li L, Yan J. Dissecting meiotic recombination based on tetrad analysis by single-microspore sequencing in maize. Nature Communications. 6: 6648. PMID 25800954 DOI: 10.1038/ncomms7648  0.356
2015 Liu H, Wang X, Warburton ML, Wen W, Jin M, Deng M, Liu J, Tong H, Pan Q, Yang X, Yan J. Genomic, Transcriptomic, and Phenomic Variation Reveals the Complex Adaptation of Modern Maize Breeding. Molecular Plant. 8: 871-84. PMID 25620769 DOI: 10.1016/j.molp.2015.01.016  0.453
2015 Liu L, du Y, Huo D, Wang M, Shen X, Yue B, Qiu F, Zheng Y, Yan J, Zhang Z. Genetic architecture of maize kernel row number and whole genome prediction Theoretical and Applied Genetics. DOI: 10.1007/s00122-015-2581-2  0.354
2014 Yang N, Lu Y, Yang X, Huang J, Zhou Y, Ali F, Wen W, Liu J, Li J, Yan J. Genome wide association studies using a new nonparametric model reveal the genetic architecture of 17 agronomic traits in an enlarged maize association panel. Plos Genetics. 10: e1004573. PMID 25211220 DOI: 10.1371/journal.pgen.1004573  0.49
2014 Guo T, Yang N, Tong H, Pan Q, Yang X, Tang J, Wang J, Li J, Yan J. Genetic basis of grain yield heterosis in an "immortalized F₂" maize population. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 127: 2149-58. PMID 25104328 DOI: 10.1007/s00122-014-2368-x  0.407
2014 Li K, Yan J, Li J, Yang X. Genetic architecture of rind penetrometer resistance in two maize recombinant inbred line populations. Bmc Plant Biology. 14: 152. PMID 24893717 DOI: 10.1186/1471-2229-14-152  0.325
2014 Wen W, Li D, Li X, Gao Y, Li W, Li H, Liu J, Liu H, Chen W, Luo J, Yan J. Metabolome-based genome-wide association study of maize kernel leads to novel biochemical insights. Nature Communications. 5: 3438. PMID 24633423 DOI: 10.1038/ncomms4438  0.531
2013 Fu J, Cheng Y, Linghu J, Yang X, Kang L, Zhang Z, Zhang J, He C, Du X, Peng Z, Wang B, Zhai L, Dai C, Xu J, Wang W, ... ... Yan J, et al. RNA sequencing reveals the complex regulatory network in the maize kernel. Nature Communications. 4: 2832. PMID 24343161 DOI: 10.1038/ncomms3832  0.378
2013 Osman KA, Tang B, Wang Y, Chen J, Yu F, Li L, Han X, Zhang Z, Yan J, Zheng Y, Yue B, Qiu F. Dynamic QTL analysis and candidate gene mapping for waterlogging tolerance at maize seedling stage. Plos One. 8: e79305. PMID 24244474 DOI: 10.1371/journal.pone.0079305  0.406
2013 Liu S, Wang X, Wang H, Xin H, Yang X, Yan J, Li J, Tran LS, Shinozaki K, Yamaguchi-Shinozaki K, Qin F. Genome-wide analysis of ZmDREB genes and their association with natural variation in drought tolerance at seedling stage of Zea mays L. Plos Genetics. 9: e1003790. PMID 24086146 DOI: 10.1371/journal.pgen.1003790  0.433
2013 Xue Y, Warburton ML, Sawkins M, Zhang X, Setter T, Xu Y, Grudloyma P, Gethi J, Ribaut J, Li W, Zhang X, Zheng Y, Yan J. Genome-wide association analysis for nine agronomic traits in maize under well-watered and water-stressed conditions Theoretical and Applied Genetics. 126: 2587-2596. PMID 23884600 DOI: 10.1007/S00122-013-2158-X  0.46
2013 Ali F, Pan Q, Chen G, Zahid KR, Yan J. Evidence of Multiple Disease Resistance (MDR) and implication of meta-analysis in marker assisted selection. Plos One. 8: e68150. PMID 23874526 DOI: 10.1371/journal.pone.0068150  0.324
2013 Li H, Peng Z, Yang X, Wang W, Fu J, Wang J, Han Y, Chai Y, Guo T, Yang N, Liu J, Warburton ML, Cheng Y, Hao X, Zhang P, ... ... Yan J, et al. Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels. Nature Genetics. 45: 43-50. PMID 23242369 DOI: 10.1038/ng.2484  0.393
2013 Babu R, Rojas NP, Gao S, Yan J, Pixley K. Validation of the effects of molecular marker polymorphisms in LcyE and CrtRB1 on provitamin A concentrations for 26 tropical maize populations. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 126: 389-99. PMID 23052023 DOI: 10.1007/s00122-012-1987-3  0.356
2013 ZHENG D, YANG X, LI J, YAN J, ZHANG S, HE Z, HUANG Y. QTL Identification for Plant Height and Ear Height Based on SNP Mapping in Maize (Zea mays L.) Acta Agronomica Sinica. 39: 549. DOI: 10.3724/SP.J.1006.2013.00549  0.302
2012 Pan Q, Ali F, Yang X, Li J, Yan J. Exploring the genetic characteristics of two recombinant inbred line populations via high-density SNP markers in maize. Plos One. 7: e52777. PMID 23300772 DOI: 10.1371/journal.pone.0052777  0.45
2012 Fu Z, Chai Y, Zhou Y, Yang X, Warburton ML, Xu S, Cai Y, Zhang D, Li J, Yan J. Natural variation in the sequence of PSY1 and frequency of favorable polymorphisms among tropical and temperate maize germplasm. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 126: 923-35. PMID 23238762 DOI: 10.1007/s00122-012-2026-0  0.343
2012 Wang M, Yan J, Zhao J, Song W, Zhang X, Xiao Y, Zheng Y. Genome-wide association study (GWAS) of resistance to head smut in maize. Plant Science : An International Journal of Experimental Plant Biology. 196: 125-31. PMID 23017907 DOI: 10.1016/j.plantsci.2012.08.004  0.322
2012 Zhang P, Allen WB, Nagasawa N, Ching AS, Heppard EP, Li H, Hao X, Li X, Yang X, Yan J, Nagato Y, Sakai H, Shen B, Li J. A transposable element insertion within ZmGE2 gene is associated with increase in embryo to endosperm ratio in maize. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 125: 1463-71. PMID 22772589 DOI: 10.1007/s00122-012-1926-3  0.404
2012 Wen W, Franco J, Chavez-Tovar VH, Yan J, Taba S. Genetic characterization of a core set of a tropical maize race Tuxpeño for further use in maize improvement. Plos One. 7: e32626. PMID 22412898 DOI: 10.1371/journal.pone.0032626  0.359
2012 Wen W, Franco J, Chavez-Tovar VH, Yan J, Taba S. Genetic characterization of a core set of a tropical maize race Tuxpeño for further use in maize improvement. Plos One. 7: e32626. PMID 22412898 DOI: 10.1371/journal.pone.0032626  0.359
2012 Zhou Y, Han Y, Li Z, Fu Y, Fu Z, Xu S, Li J, Yan J, Yang X. ZmcrtRB3 encodes a carotenoid hydroxylase that affects the accumulation of α-carotene in maize kernel. Journal of Integrative Plant Biology. 54: 260-9. PMID 22348777 DOI: 10.1111/j.1744-7909.2012.01106.x  0.303
2012 Ali F, Yan J. Disease resistance in maize and the role of molecular breeding in defending against global threat. Journal of Integrative Plant Biology. 54: 134-51. PMID 22333113 DOI: 10.1111/j.1744-7909.2012.01105.x  0.371
2012 Zhang X, Tang B, Yu F, Li L, Wang M, Xue Y, Zhang Z, Yan J, Yue B, Zheng Y, Qiu F. Identification of Major QTL for Waterlogging Tolerance Using Genome-Wide Association and Linkage Mapping of Maize Seedlings Plant Molecular Biology Reporter. 31: 594-606. DOI: 10.1007/s11105-012-0526-3  0.403
2011 Li L, Li H, Li Q, Yang X, Zheng D, Warburton M, Chai Y, Zhang P, Guo Y, Yan J, Li J. An 11-bp insertion in Zea mays fatb reduces the palmitic acid content of fatty acids in maize grain. Plos One. 6: e24699. PMID 21931818 DOI: 10.1371/journal.pone.0024699  0.345
2011 Yang X, Xu Y, Shah T, Li H, Han Z, Li J, Yan J. Comparison of SSRs and SNPs in assessment of genetic relatedness in maize. Genetica. 139: 1045-54. PMID 21904888 DOI: 10.1007/s10709-011-9606-9  0.414
2011 Yang X, Xu Y, Shah T, Li H, Han Z, Li J, Yan J. Comparison of SSRs and SNPs in assessment of genetic relatedness in maize. Genetica. 139: 1045-54. PMID 21904888 DOI: 10.1007/s10709-011-9606-9  0.414
2011 Setter TL, Yan J, Warburton M, Ribaut JM, Xu Y, Sawkins M, Buckler ES, Zhang Z, Gore MA. Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought. Journal of Experimental Botany. 62: 701-16. PMID 21084430 DOI: 10.1093/Jxb/Erq308  0.352
2011 Yan J, Warburton M, Crouch J. Association Mapping for Enhancing Maize (Zea mays L.) Genetic Improvement Crop Science. 51: 433-449. DOI: 10.2135/CROPSCI2010.04.0233  0.32
2010 Crossa J, Campos Gde L, Pérez P, Gianola D, Burgueño J, Araus JL, Makumbi D, Singh RP, Dreisigacker S, Yan J, Arief V, Banziger M, Braun HJ. Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers. Genetics. 186: 713-24. PMID 20813882 DOI: 10.1534/Genetics.110.118521  0.383
2010 Li L, Li H, Li J, Xu S, Yang X, Li J, Yan J. A genome-wide survey of maize lipid-related genes: candidate genes mining, digital gene expression profiling and co-location with QTL for maize kernel oil. Science China. Life Sciences. 53: 690-700. PMID 20602272 DOI: 10.1007/s11427-010-4007-3  0.324
2010 Yang X, Yan J, Shah T, Warburton ML, Li Q, Li L, Gao Y, Chai Y, Fu Z, Zhou Y, Xu S, Bai G, Meng Y, Zheng Y, Li J. Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 121: 417-31. PMID 20349034 DOI: 10.1007/s00122-010-1320-y  0.455
2010 Li Q, Yang X, Bai G, Warburton ML, Mahuku G, Gore M, Dai J, Li J, Yan J. Cloning and characterization of a putative GS3 ortholog involved in maize kernel development. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 753-63. PMID 19898828 DOI: 10.1007/S00122-009-1196-X  0.384
2010 Yang X, Guo Y, Yan J, Zhang J, Song T, Rocheford T, Li JS. Major and minor QTL and epistasis contribute to fatty acid compositions and oil concentration in high-oil maize. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 665-78. PMID 19856173 DOI: 10.1007/s00122-009-1184-1  0.306
2010 Wen W, Taba S, Shah T, Chavez Tovar VH, Yan J. Detection of genetic integrity of conserved maize (Zea mays L.) germplasm in genebanks using SNP markers Genetic Resources and Crop Evolution. 58: 189-207. DOI: 10.1007/s10722-010-9562-8  0.304
2009 Yan J, Shah T, Warburton ML, Buckler ES, McMullen MD, Crouch J. Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers. Plos One. 4: e8451. PMID 20041112 DOI: 10.1371/Journal.Pone.0008451  0.344
2009 Tang J, Yan J, Ma X, Teng W, Wu W, Dai J, Dhillon BS, Melchinger AE, Li J. Dissection of the genetic basis of heterosis in an elite maize hybrid by QTL mapping in an immortalized F2 population. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 333-40. PMID 19936698 DOI: 10.1007/s00122-009-1213-0  0.353
2009 Lu Y, Yan J, Guimarães CT, Taba S, Hao Z, Gao S, Chen S, Li J, Zhang S, Vivek BS, Magorokosho C, Mugo S, Makumbi D, Parentoni SN, Shah T, et al. Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 93-115. PMID 19823800 DOI: 10.1007/S00122-009-1162-7  0.411
2009 Xu Y, Skinner DJ, Wu H, Palacios-Rojas N, Araus JL, Yan J, Gao S, Warburton ML, Crouch JH. Advances in maize genomics and their value for enhancing genetic gains from breeding. International Journal of Plant Genomics. 2009: 957602. PMID 19688107 DOI: 10.1155/2009/957602  0.496
2007 Tang J, Ma X, Teng W, Yan J, Wu W, Dai J, Li J. Detection of quantitative trait loci and heterotic loci for plant height using an immortalized F2 population in maize Chinese Science Bulletin. 52: 477-483. DOI: 10.1007/S11434-007-0098-Z  0.304
2006 Yan JB, Tang JH, Meng YJ, Ma XQ, Teng WT, Chander S, Li L, Li JS. Improving QTL mapping resolution based on genotypic sampling--a case using a RIL population. Yi Chuan Xue Bao = Acta Genetica Sinica. 33: 617-24. PMID 16875319 DOI: 10.1016/S0379-4172(06)60091-7  0.319
2006 Ju C, Zhang F, Gao Y, Zhang W, Yan J, Dai J, Li J. Cloning, chromosome mapping and expression analysis of an R2R3-MYB gene under-expressed in maize hybrid. Molecular Biology Reports. 33: 103-10. PMID 16817019 DOI: 10.1007/s11033-006-0016-5  0.336
2006 Yan J, Tang H, Huang Y, Zheng Y, Subhash C, Li J. A genome scan for quantitative trait loci affecting grain yield and its components of maize both in single-and two-locus levels Science Bulletin. 51: 1452-1461. DOI: 10.1007/S11434-006-1452-2  0.386
2006 Yan J, Tang H, Huang Y, Zheng Y, Li J. Quantitative trait loci mapping and epistatic analysis for grain yield and yield components using molecular markers with an elite maize hybrid Euphytica. 149: 121-131. DOI: 10.1007/s10681-005-9060-9  0.352
2005 Tang H, Yan JB, Huang YQ, Zheng YL, Li JS. [QTL mapping of five agronomic traits in maize]. Yi Chuan Xue Bao = Acta Genetica Sinica. 32: 203-9. PMID 15759869  0.374
2004 Yan JB, Tang H, Huang YQ, Zheng YL, Li JS. [Comparative analyses of QTL for important agronomic traits between maize and rice]. Yi Chuan Xue Bao = Acta Genetica Sinica. 31: 1401-7. PMID 15633647  0.484
2003 Yan JB, Tang H, Huang YQ, Zheng YL, Li JS. [Genetic analysis of segregation distortion of molecular markers in maize F2 population]. Yi Chuan Xue Bao = Acta Genetica Sinica. 30: 913-8. PMID 14669507  0.369
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