| Year |
Citation |
Score |
| 2024 |
Zhang X, Marand AP, Yan H, Schmitz RJ. scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing. Genome Biology. 25: 90. PMID 38589969 DOI: 10.1186/s13059-024-03235-5 |
0.674 |
|
| 2024 |
Mendieta JP, Tu X, Jiang D, Yan H, Zhang X, Marand AP, Zhong S, Schmitz RJ. Investigating the -Regulatory Basis of C and C Photosynthesis in Grasses at Single-Cell Resolution. Biorxiv : the Preprint Server For Biology. PMID 38405933 DOI: 10.1101/2024.01.05.574340 |
0.543 |
|
| 2024 |
Yan H, Mendieta JP, Zhang X, Marand AP, Liang Y, Luo Z, Roulé T, Wagner D, Tu X, Wang Y, Zhong S, Wessler SR, Schmitz RJ. Evolution of cell-type-specific accessible chromatin regions and the -regulatory elements that drive lineage-specific innovation. Biorxiv : the Preprint Server For Biology. PMID 38260561 DOI: 10.1101/2024.01.08.574753 |
0.658 |
|
| 2023 |
Kieft R, Zhang Y, Yan H, Schmitz RJ, Sabatini R. Protein Phosphatase PP1 Regulation of Pol II Phosphorylation is Linked to Transcription Termination and Allelic Exclusion of VSG Genes and TERRA in Trypanosomes. Biorxiv : the Preprint Server For Biology. PMID 37905150 DOI: 10.1101/2023.10.21.563358 |
0.52 |
|
| 2023 |
Zhang X, Marand AP, Yan H, Schmitz RJ. Massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing. Biorxiv : the Preprint Server For Biology. PMID 37786710 DOI: 10.1101/2023.09.17.558155 |
0.674 |
|
| 2023 |
Mendieta JP, Sangra A, Yan H, Minow MAA, Schmitz RJ. Exploring Plant Cis-Regulatory Elements at Single-Cell Resolution: Overcoming Biological and Computational Challenges to Advance Plant Research. The Plant Journal : For Cell and Molecular Biology. PMID 37309871 DOI: 10.1111/tpj.16351 |
0.585 |
|
| 2023 |
Kieft R, Zhang Y, Yan H, Schmitz RJ, Sabatini R. Knockout of protein phosphatase 1 in Leishmania major reveals its role during RNA polymerase II transcription termination. Nucleic Acids Research. PMID 37194692 DOI: 10.1093/nar/gkad394 |
0.507 |
|
| 2022 |
Yan H, Lee J, Song Q, Li Q, Schiefelbein J, Zhao B, Li S. Identification of new marker genes from plant single-cell RNA-seq data using interpretable machine learning methods. The New Phytologist. PMID 35211979 DOI: 10.1111/nph.18053 |
0.365 |
|
| 2021 |
Li S, Yan H, Lee J. Identification of Gene Regulatory Networks from Single-Cell Expression Data. Methods in Molecular Biology (Clifton, N.J.). 2328: 153-170. PMID 34251624 DOI: 10.1007/978-1-0716-1534-8_9 |
0.431 |
|
| 2020 |
Jiménez-Ruiz J, Ramírez-Tejero JA, Fernández-Pozo N, Leyva-Pérez MO, Yan H, Rosa R, Belaj A, Montes E, Rodríguez-Ariza MO, Navarro F, Barroso JB, Beuzón CR, Valpuesta V, Bombarely A, Luque F. Transposon activation is a major driver in the genome evolution of cultivated olive trees (Olea europaea L.). The Plant Genome. 13: e20010. PMID 33016633 DOI: 10.1002/tpg2.20010 |
0.332 |
|
| 2020 |
Yan H, Bombarely A, Li S. DeepTE: a computational method for de novo classification of transposons with convolutional neural network. Bioinformatics (Oxford, England). PMID 32415954 DOI: 10.1093/Bioinformatics/Btaa519 |
0.388 |
|
| 2019 |
Huang L, Feng G, Yan H, Zhang Z, Bushman BS, Wang J, Bombarely A, Li M, Yang Z, Nie G, Xie W, Xu L, Chen P, Zhao X, Jiang W, et al. Genome assembly provides insights into the genome evolution and flowering regulation of orchardgrass. Plant Biotechnology Journal. PMID 31276273 DOI: 10.1111/Pbi.13205 |
0.362 |
|
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