| Year |
Citation |
Score |
| 2022 |
Weisman CM, Murray AW, Eddy SR. Mixing genome annotation methods in a comparative analysis inflates the apparent number of lineage-specific genes. Current Biology : Cb. PMID 35588743 DOI: 10.1016/j.cub.2022.04.085 |
0.313 |
|
| 2017 |
Weisman CM, Eddy SR. Gene Evolution: Getting Something from Nothing. Current Biology : Cb. 27: R661-R663. PMID 28697368 DOI: 10.1016/j.cub.2017.05.056 |
0.32 |
|
| 2015 |
Chen X, Jung S, Beh LY, Eddy SR, Landweber LF. Combinatorial DNA rearrangement facilitates the origin of new genes in ciliates. Genome Biology and Evolution. PMID 26338187 DOI: 10.1093/Gbe/Evv172 |
0.33 |
|
| 2013 |
Wheeler TJ, Eddy SR. nhmmer: DNA homology search with profile HMMs. Bioinformatics (Oxford, England). 29: 2487-9. PMID 23842809 DOI: 10.1093/Bioinformatics/Btt403 |
0.335 |
|
| 2013 |
Wheeler TJ, Clements J, Eddy SR, Hubley R, Jones TA, Jurka J, Smit AF, Finn RD. Dfam: a database of repetitive DNA based on profile hidden Markov models. Nucleic Acids Research. 41: D70-82. PMID 23203985 DOI: 10.1093/Nar/Gks1265 |
0.357 |
|
| 2009 |
Mistry J, Cogghill P, Eddy S, Finn R, Tate J, Bateman A. Broadening Pfam Protein Sequence Annotations Nature Precedings. DOI: 10.1038/Npre.2009.3194.1 |
0.365 |
|
| 2004 |
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR. Pack-MULE transposable elements mediate gene evolution in plants. Nature. 431: 569-73. PMID 15457261 DOI: 10.1038/Nature02953 |
0.531 |
|
| 2003 |
Hillier LW, Fulton RS, Fulton LA, Graves TA, Pepin KH, Wagner-McPherson C, Layman D, Maas J, Jaeger S, Walker R, Wylie K, Sekhon M, Becker MC, O'Laughlin MD, Schaller ME, ... ... Eddy SR, et al. The DNA sequence of human chromosome 7. Nature. 424: 157-64. PMID 12853948 DOI: 10.1038/Nature01782 |
0.33 |
|
| 2003 |
Jiang N, Bao Z, Zhang X, Hirochika H, Eddy SR, McCouch SR, Wessler SR. An active DNA transposon family in rice. Nature. 421: 163-7. PMID 12520302 DOI: 10.1038/Nature01214 |
0.521 |
|
| 2003 |
Bao Z, Eddy SR. Automated de novo identification of repeat sequence families in sequenced genomes Genome Research. 13: 1269-1276. |
0.326 |
|
| 2002 |
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, ... ... Eddy SR, et al. Initial sequencing and comparative analysis of the mouse genome. Nature. 420: 520-62. PMID 12466850 DOI: 10.1038/Nature01262 |
0.332 |
|
| 2002 |
Bao Z, Eddy SR. Automated de novo identification of repeat sequence families in sequenced genomes. Genome Research. 12: 1269-76. PMID 12176934 DOI: 10.1101/Gr.88502 |
0.514 |
|
| 2002 |
Zmasek CM, Eddy SR. RIO: analyzing proteomes by automated phylogenomics using resampled inference of orthologs. Bmc Bioinformatics. 3: 14. PMID 12028595 DOI: 10.1186/1471-2105-3-14 |
0.351 |
|
| 2001 |
Zmasek CM, Eddy SR. A simple algorithm to infer gene duplication and speciation events on a gene tree Bioinformatics. 17: 821-828. PMID 11590098 |
0.324 |
|
| 2001 |
Rivas E, Klein RJ, Jones TA, Eddy SR. Computational identification of noncoding RNAs in E. coli by comparative genomics Current Biology. 11: 1369-1373. PMID 11553332 DOI: 10.1016/S0960-9822(01)00401-8 |
0.346 |
|
| 1992 |
Eddy SR, Gold L. Artificial mobile DNA element constructed from the EcoRI endonuclease gene. Proceedings of the National Academy of Sciences of the United States of America. 89: 1544-7. PMID 1311841 DOI: 10.1073/Pnas.89.5.1544 |
0.528 |
|
| 1991 |
Eddy SR, Gold L. The phage T4 nrdB intron: a deletion mutant of a version found in the wild. Genes & Development. 5: 1032-41. PMID 2044951 DOI: 10.1101/Gad.5.6.1032 |
0.527 |
|
| 1990 |
Tuerk C, Eddy S, Parma D, Gold L. Autogenous translational operator recognized by bacteriophage T4 DNA polymerase. Journal of Molecular Biology. 213: 749-61. PMID 2359122 DOI: 10.1016/S0022-2836(05)80261-X |
0.523 |
|
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