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Wei Niu - Publications

Affiliations: 
2015- Chemical and Biomolecular Engineering The University of Nebraska - Lincoln, Lincoln, NE 
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56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Gao T, Guo J, Niu W. Genetic Code Expansion in Pseudomonas putida KT2440. Methods in Molecular Biology (Clifton, N.J.). 2760: 209-217. PMID 38468091 DOI: 10.1007/978-1-0716-3658-9_13  0.627
2024 Agosto-Maldonado A, Guo J, Niu W. Engineering carboxylic acid reductases and unspecific peroxygenases for flavor and fragrance biosynthesis. Journal of Biotechnology. 385: 1-12. PMID 38428504 DOI: 10.1016/j.jbiotec.2024.02.013  0.609
2023 Cao Y, Niu W, Guo J, Guo J, Liu H, Liu H, Xian M. Production of Optically Pure ()-3-Hydroxy-γ-butyrolactone from d-Xylose Using Engineered . Journal of Agricultural and Food Chemistry. PMID 38088131 DOI: 10.1021/acs.jafc.3c06589  0.593
2023 Waldrop SP, Niu W, Guo J. Engineering of SH2 Domains for the Recognition of Protein Tyrosine O-Sulfation Sites. Methods in Molecular Biology (Clifton, N.J.). 2705: 293-305. PMID 37668981 DOI: 10.1007/978-1-0716-3393-9_16  0.569
2023 He X, Chen Y, Guo J, Niu W. Site-Specific Incorporation of Sulfotyrosine into Proteins in Mammalian Cells. Methods in Molecular Biology (Clifton, N.J.). 2676: 233-243. PMID 37277637 DOI: 10.1007/978-1-0716-3251-2_17  0.571
2023 Chen Y, Gao T, He X, Niu W, Guo J. Genetic Code Expansion in Mammalian Cells Through Quadruplet Codon Decoding. Methods in Molecular Biology (Clifton, N.J.). 2676: 181-190. PMID 37277633 DOI: 10.1007/978-1-0716-3251-2_13  0.565
2023 Niu W, Guo J. Co-translational Installation of Posttranslational Modifications by Non-canonical Amino Acid Mutagenesis. Chembiochem : a European Journal of Chemical Biology. e202300039. PMID 36853967 DOI: 10.1002/cbic.202300039  0.601
2023 Ma B, Niu W, Guo J. Proximity-enhanced protein crosslinking through an alkene-tetrazine reaction. Bioorganic Chemistry. 132: 106359. PMID 36642019 DOI: 10.1016/j.bioorg.2023.106359  0.582
2022 He X, Gao T, Chen Y, Liu K, Guo J, Niu W. Genetic Code Expansion in KT2440. Acs Synthetic Biology. PMID 36287825 DOI: 10.1021/acssynbio.2c00325  0.621
2022 Chen Y, He X, Ma B, Liu K, Gao T, Niu W, Guo J. Noncanonical amino acid mutagenesis in response to recoding signal-enhanced quadruplet codons. Nucleic Acids Research. PMID 35657094 DOI: 10.1093/nar/gkac474  0.604
2022 Mueller J, Willett H, Feist AM, Niu W. Engineering Pseudomonas putida for improved utilization of syringyl aromatics. Biotechnology and Bioengineering. PMID 35524438 DOI: 10.1002/bit.28131  0.724
2022 Lim HG, Rychel K, Sastry AV, Bentley GJ, Mueller J, Schindel HS, Larsen PE, Laible PD, Guss AM, Niu W, Johnson CW, Beckham GT, Feist AM, Palsson BO. Machine-learning from Pseudomonas putida KT2440 transcriptomes reveals its transcriptional regulatory network. Metabolic Engineering. PMID 35489688 DOI: 10.1016/j.ymben.2022.04.004  0.673
2022 He X, Ma B, Chen Y, Guo J, Niu W. Genetic encoding of a nonhydrolyzable phosphotyrosine analog in mammalian cells. Chemical Communications (Cambridge, England). PMID 35474127 DOI: 10.1039/d2cc01578a  0.551
2021 He X, Guo J, Niu W. Studying Protein Tyrosine O-Sulfation in Mammalian Cells with Genetically Encoded Sulfotyrosine. Current Protocols. 1: e301. PMID 34767302 DOI: 10.1002/cpz1.301  0.565
2021 Guo J, Niu W. Genetic Code Expansion Through Quadruplet Codon Decoding. Journal of Molecular Biology. 167346. PMID 34762896 DOI: 10.1016/j.jmb.2021.167346  0.582
2021 Lawrie J, Waldrop S, Morozov A, Niu W, Guo J. Engineering of a Small Protein Scaffold To Recognize Sulfotyrosine with High Specificity. Acs Chemical Biology. PMID 34251168 DOI: 10.1021/acschembio.1c00382  0.584
2020 He X, Chen Y, Beltran DG, Kelly M, Ma B, Lawrie J, Wang F, Dodds E, Zhang L, Guo J, Niu W. Functional genetic encoding of sulfotyrosine in mammalian cells. Nature Communications. 11: 4820. PMID 32973160 DOI: 10.1038/s41467-020-18629-9  0.568
2020 Kramer L, Le X, Rodriguez M, Wilson MA, Guo J, Niu W. Engineering Carboxylic Acid Reductase (CAR) through A Whole-Cell Growth-Coupled NADPH Recycling Strategy. Acs Synthetic Biology. PMID 32589835 DOI: 10.1021/Acssynbio.0C00290  0.784
2020 Roman-Arocho GM, Shang X, Niu W, Guo J. Design of fluorescent protein-based sensors through a general protection-deprotection strategy. Methods in Enzymology. 640: 63-82. PMID 32560806 DOI: 10.1016/Bs.Mie.2020.04.003  0.602
2020 Niu W, Willett H, Mueller J, He X, Kramer L, Ma B, Guo J. Direct biosynthesis of adipic acid from lignin-derived aromatics using engineered Pseudomonas putida KT2440. Metabolic Engineering. PMID 32130971 DOI: 10.1016/J.Ymben.2020.02.006  0.786
2019 Nogales J, Mueller J, Gudmundsson S, Canalejo FJ, Duque E, Monk J, Feist AM, Ramos JL, Niu W, Palsson BO. High-quality genome-scale metabolic modeling of Pseudomonas putida highlights its broad metabolic capabilities. Environmental Microbiology. PMID 31657101 DOI: 10.1111/1462-2920.14843  0.687
2019 Kramer L, Le X, Hankore ED, Wilson MA, Guo J, Niu W. Engineering and Characterization of Hybrid Carboxylic Acid Reductases. Journal of Biotechnology. PMID 31430496 DOI: 10.1016/J.Jbiotec.2019.08.008  0.776
2019 Lawrie J, Niu W, Guo J. Engineering of a sulfotyrosine-recognizing small protein scaffold for the study of protein tyrosine O-sulfation. Methods in Enzymology. 622: 67-89. PMID 31155066 DOI: 10.1016/Bs.Mie.2019.02.004  0.624
2019 Hankore ED, Zhang L, Chen Y, Liu K, Niu W, Guo J. Genetic incorporation of noncanonical amino acids using two mutually orthogonal quadruplet codons. Acs Synthetic Biology. PMID 30995842 DOI: 10.1021/Acssynbio.9B00051  0.661
2019 Cao Y, Zhang R, Liu W, Zhao G, Niu W, Guo J, Xian M, Liu H. Manipulation of the precursor supply for high-level production of longifolene by metabolically engineered Escherichia coli. Scientific Reports. 9: 95. PMID 30643175 DOI: 10.1038/S41598-018-36495-W  0.629
2019 Niu W, Kramer L, Mueller J, Liu K, Guo J. Metabolic engineering of for the stereospecific biosynthesis of 1,2-propanediol through lactic acid. Metabolic Engineering Communications. 8: e00082. PMID 30591904 DOI: 10.1016/J.Mec.2018.E00082  0.779
2018 Liu Y, He X, Lim W, Mueller J, Lawrie J, Kramer L, Guo J, Niu W. Deciphering molecular details in the assembly of alpha-type carboxysome. Scientific Reports. 8: 15062. PMID 30305640 DOI: 10.1038/S41598-018-33074-X  0.752
2018 Chen Y, Wan Y, Wang N, Yuan Z, Niu W, Li Q, Guo J. Controlling the replication of a genomically recoded HIV-1 with a functional quadruplet codon in mammalian cells. Acs Synthetic Biology. PMID 29787233 DOI: 10.1021/Acssynbio.8B00096  0.607
2018 Kramer L, Hankore E, Liu Y, Liu K, Jimenez E, Guo J, Niu W. Characterization of Carboxylic Acid Reductases for Biocatalytic Synthesis of Industrial Chemicals. Chembiochem : a European Journal of Chemical Biology. PMID 29659112 DOI: 10.1002/Cbic.201800157  0.795
2018 Shang X, Chen Y, Wang N, Niu W, Guo J. Oxidation-induced generation of a mild electrophile for proximity-enhanced protein-protein crosslinking. Chemical Communications (Cambridge, England). 54: 4172-4175. PMID 29629441 DOI: 10.1039/C8Cc01639A  0.581
2018 Lawrie J, Song X, Niu W, Guo J. A high throughput approach for the generation of orthogonally interacting protein pairs. Scientific Reports. 8: 867. PMID 29343761 DOI: 10.1038/S41598-018-19281-6  0.591
2017 Shang X, Lai R, Song X, Li H, Niu W, Guo J. An improved photo-induced fluorogenic alkene-tetrazole reaction for protein labeling. Bioconjugate Chemistry. PMID 29022697 DOI: 10.1021/Acs.Bioconjchem.7B00562  0.594
2017 Wang N, Yuan Z, Niu W, Li Q, Guo J. Synthetic biology approach for the development of conditionally replicating HIV-1 vaccine. Journal of Chemical Technology and Biotechnology (Oxford, Oxfordshire : 1986). 92: 455-462. PMID 28983143 DOI: 10.1002/Jctb.5174  0.542
2017 Shang X, Wang N, Cerny R, Niu W, Guo J. Fluorescent Protein-Based Turn-On Probe through a General Protection-Deprotection Design Strategy. Acs Sensors. 2: 961-966. PMID 28750537 DOI: 10.1021/Acssensors.7B00223  0.589
2017 Shang X, Song X, Faller C, Lai R, Li H, Cerny R, Niu W, Guo J. Fluorogenic protein labeling using a genetically encoded unstrained alkene. Chemical Science. 8: 1141-1145. PMID 28451254 DOI: 10.1039/C6Sc03635J  0.627
2017 Niu W, Guo J. Novel Fluorescence-Based Biosensors Incorporating Unnatural Amino Acids. Methods in Enzymology. 589: 191-219. PMID 28336064 DOI: 10.1016/Bs.Mie.2017.01.012  0.649
2017 Yuan Z, Wang N, Kang G, Niu W, Li Q, Guo J. Controlling multi-cycle replication of live-attenuated HIV-1 using an unnatural genetic switch. Acs Synthetic Biology. PMID 28106981 DOI: 10.1021/Acssynbio.6B00373  0.547
2016 Ju T, Niu W, Guo J. Evolution of Src Homology 2 (SH2) Domain to Recognize Sulfotyrosine. Acs Chemical Biology. PMID 27428792 DOI: 10.1021/Acschembio.6B00555  0.599
2016 Cao Y, Cheng T, Zhao G, Niu W, Guo J, Xian M, Liu H. Metabolic engineering of Escherichia coli for the production of hydroxy fatty acids from glucose. Bmc Biotechnology. 16: 26. PMID 26956722 DOI: 10.1186/S12896-016-0257-X  0.631
2016 Wang N, Shang X, Cerny R, Niu W, Guo J. Systematic Evolution and Study of UAGN Decoding tRNAs in a Genomically Recoded Bacteria. Scientific Reports. 6: 21898. PMID 26906548 DOI: 10.1038/Srep21898  0.581
2016 Tong W, Xu Y, Xian M, Niu W, Guo J, Liu H, Zhao G. Biosynthetic pathway for acrylic acid from glycerol in recombinant Escherichia coli. Applied Microbiology and Biotechnology. PMID 26782744 DOI: 10.1007/S00253-015-7272-Z  0.629
2016 Song X, Shang X, Ju T, Cerny R, Niu W, Guo J. A photoactivatable Src homology 2 (SH2) domain Rsc Advances. 6: 51120-51124. DOI: 10.1039/C6Ra06211C  0.546
2015 Cao Y, Niu W, Guo J, Xian M, Liu H. Biotechnological production of 1,2,4-butanetriol: An efficient process to synthesize energetic material precursor from renewable biomass. Scientific Reports. 5: 18149. PMID 26670289 DOI: 10.1038/Srep18149  0.634
2015 Niu W, Guo J. Stereospecific microbial conversion of lactic acid into 1,2-propanediol. Acs Synthetic Biology. 4: 378-82. PMID 25007409 DOI: 10.1021/Sb500240P  0.667
2015 Wang N, Ju T, Niu W, Guo J. Fine-tuning interaction between aminoacyl-tRNA synthetase and tRNA for efficient synthesis of proteins containing unnatural amino acids. Acs Synthetic Biology. 4: 207-12. PMID 24847685 DOI: 10.1021/Sb500195W  0.663
2014 Wang N, Li Y, Niu W, Sun M, Cerny R, Li Q, Guo J. Construction of a live-attenuated HIV-1 vaccine through genetic code expansion. Angewandte Chemie (International Ed. in English). 53: 4867-71. PMID 24715496 DOI: 10.1002/Anie.201402092  0.552
2013 Niu W, Guo J. Expanding the chemistry of fluorescent protein biosensors through genetic incorporation of unnatural amino acids. Molecular Biosystems. 9: 2961-70. PMID 24080788 DOI: 10.1039/C3Mb70204A  0.617
2013 Wang G, Xu Z, Chen Z, Niu W, Zhou Y, Guo J, Tan L. Sequential binding of large molecules to hairy MOFs. Chemical Communications (Cambridge, England). 49: 6641-3. PMID 23770742 DOI: 10.1039/C3Cc42711K  0.552
2013 Niu W, Schultz PG, Guo J. An expanded genetic code in mammalian cells with a functional quadruplet codon. Acs Chemical Biology. 8: 1640-5. PMID 23662731 DOI: 10.1021/Cb4001662  0.651
2013 Ju T, Niu W, Cerny R, Bollman J, Roy A, Guo J. Molecular recognition of sulfotyrosine and phosphotyrosine by the Src homology 2 domain. Molecular Biosystems. 9: 1829-32. PMID 23567872 DOI: 10.1039/C3Mb70061E  0.581
2012 Wang F, Niu W, Guo J, Schultz PG. Unnatural amino acid mutagenesis of fluorescent proteins. Angewandte Chemie (International Ed. in English). 51: 10132-5. PMID 22951916 DOI: 10.1002/Anie.201204668  0.634
2012 Park CM, Niu W, Liu C, Biggs TD, Guo J, Xian M. A proline-based phosphine template for Staudinger ligation. Organic Letters. 14: 4694-7. PMID 22924811 DOI: 10.1021/Ol3022484  0.565
2012 Park CM, Niu W, Liu C, Biggs TD, Guo J, Xian M. Erratum: A proline-based phosphine template for staudinger ligation (Organic Letters (4694)) Organic Letters. 14. DOI: 10.1021/Ol3024538  0.534
2011 Yim H, Haselbeck R, Niu W, Pujol-Baxley C, Burgard A, Boldt J, Khandurina J, Trawick JD, Osterhout RE, Stephen R, Estadilla J, Teisan S, Schreyer HB, Andrae S, Yang TH, et al. Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol. Nature Chemical Biology. 7: 445-52. PMID 21602812 DOI: 10.1038/Nchembio.580  0.42
2003 Niu W, Molefe MN, Frost JW. Microbial synthesis of the energetic material precursor 1,2,4-butanetriol. Journal of the American Chemical Society. 125: 12998-9. PMID 14570452 DOI: 10.1021/Ja036391+  0.704
2002 Niu W, Draths KM, Frost JW. Benzene-free synthesis of adipic acid. Biotechnology Progress. 18: 201-11. PMID 11934286 DOI: 10.1021/Bp010179X  0.619
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