| Year |
Citation |
Score |
| 2023 |
Ansari I, Solé-Boldo L, Ridnik M, Gutekunst J, Gilliam O, Korshko M, Liwinski T, Jickeli B, Weinberg-Corem N, Shoshkes-Carmel M, Pikarsky E, Elinav E, Lyko F, Bergman Y. TET2 and TET3 loss disrupts small intestine differentiation and homeostasis. Nature Communications. 14: 4005. PMID 37414790 DOI: 10.1038/s41467-023-39512-3 |
0.411 |
|
| 2022 |
Falick Michaeli T, Sabag O, Fok R, Azria B, Monin J, Nevo Y, Gielchinsky Y, Berman BP, Cedar H, Bergman Y. Muscle injury causes long-term changes in stem-cell DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 119: e2212306119. PMID 36534800 DOI: 10.1073/pnas.2212306119 |
0.334 |
|
| 2021 |
Blumenfeld B, Masika H, Farago M, Yehuda Y, Halaseh L, Vardi O, Rapoport R, Levin-Klein R, Cedar H, Bergman Y, Simon I. Chromosomal coordination and differential structure of asynchronous replicating regions. Nature Communications. 12: 1035. PMID 33589603 DOI: 10.1038/s41467-021-21348-4 |
0.326 |
|
| 2020 |
Ansari I, Raddatz G, Gutekunst J, Ridnik M, Cohen D, Abu-Remaileh M, Tuganbaev T, Shapiro H, Pikarsky E, Elinav E, Lyko F, Bergman Y. The microbiota programs DNA methylation to control intestinal homeostasis and inflammation. Nature Microbiology. PMID 32015497 DOI: 10.1038/S41564-019-0659-3 |
0.704 |
|
| 2019 |
Falick Michaeli T, Spiro A, Sabag O, Karavani G, Yagel S, Eventov-Friedman S, Cedar H, Bergman Y, Gielchinsky Y. Determining gestational age using genome methylation profile: A novel approach for fetal medicine. Prenatal Diagnosis. PMID 31330572 DOI: 10.1002/Pd.5535 |
0.339 |
|
| 2018 |
Mor N, Rais Y, Sheban D, Peles S, Aguilera-Castrejon A, Zviran A, Elinger D, Viukov S, Geula S, Krupalnik V, Zerbib M, Chomsky E, Lasman L, Shani T, Bayerl J, ... ... Bergman Y, et al. Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency. Cell Stem Cell. PMID 30122475 DOI: 10.1016/J.Stem.2018.07.004 |
0.446 |
|
| 2018 |
Bormann F, Rodríguez-Paredes M, Lasitschka F, Edelmann D, Musch T, Benner A, Bergman Y, Dieter SM, Ball CR, Glimm H, Linhart HG, Lyko F. Cell-of-Origin DNA Methylation Signatures Are Maintained during Colorectal Carcinogenesis. Cell Reports. 23: 3407-3418. PMID 29898408 DOI: 10.1016/J.Celrep.2018.05.045 |
0.458 |
|
| 2017 |
Masika H, Farago M, Hecht M, Condiotti R, Makedonski K, Buganim Y, Burstyn-Cohen T, Bergman Y, Cedar H. Programming asynchronous replication in stem cells. Nature Structural & Molecular Biology. PMID 29131141 DOI: 10.1038/Nsmb.3503 |
0.446 |
|
| 2017 |
Levin-Klein R, Fraenkel S, Lichtenstein M, Matheson LS, Bartok O, Nevo Y, Kadener S, Corcoran AE, Cedar H, Bergman Y. Clonally stable Vκ allelic choice instructs Igκ repertoire. Nature Communications. 8: 15575. PMID 28555639 DOI: 10.1038/Ncomms15575 |
0.449 |
|
| 2017 |
Bormann F, Rodríguez-Paredes M, Bergman Y, Linhart HG, Lyko F. Abstract 4350: Cell-of-origin differentiation stages define methylation-based subtypes of human colorectal cancer Cancer Research. 77: 4350-4350. DOI: 10.1158/1538-7445.Am2017-4350 |
0.434 |
|
| 2016 |
Orlanski S, Labi V, Reizel Y, Spiro A, Lichtenstein M, Levin-Klein R, Koralov SB, Skversky Y, Rajewsky K, Cedar H, Bergman Y. Tissue-specific DNA demethylation is required for proper B-cell differentiation and function. Proceedings of the National Academy of Sciences of the United States of America. PMID 27091986 DOI: 10.1073/Pnas.1604365113 |
0.484 |
|
| 2016 |
Aran D, Abu-Remaileh M, Levy R, Meron N, Toperoff G, Edrei Y, Bergman Y, Hellman A. Embryonic Stem Cell (ES)-Specific Enhancers Specify the Expression Potential of ES Genes in Cancer. Plos Genetics. 12: e1005840. PMID 26886256 DOI: 10.1371/Journal.Pgen.1005840 |
0.734 |
|
| 2016 |
Aran D, Abu-Remaileh M, Levy R, Meron N, Toperoff G, Edrei Y, Bergman Y, Hellman A. Embryonic Stem Cell (ES)-Specific Enhancers Specify the Expression Potential of ES Genes in Cancer Plos Genetics. 12. DOI: 10.1371/journal.pgen.1005840 |
0.689 |
|
| 2015 |
Abu-Remaileh M, Bender S, Raddatz G, Ansari I, Cohen D, Gutekunst J, Musch T, Linhart H, Breiling A, Pikarsky E, Bergman Y, Lyko F. Chronic inflammation induces a novel epigenetic program that is conserved in intestinal adenomas and in colorectal cancer. Cancer Research. 75: 2120-30. PMID 25808873 DOI: 10.1158/0008-5472.Can-14-3295 |
0.696 |
|
| 2014 |
Levin-Klein R, Bergman Y. Epigenetic regulation of monoallelic rearrangement (allelic exclusion) of antigen receptor genes. Frontiers in Immunology. 5: 625. PMID 25538709 DOI: 10.3389/Fimmu.2014.00625 |
0.493 |
|
| 2014 |
Levin-Klein R, Kirillov A, Rosenbluh C, Cedar H, Bergman Y. A novel pax5-binding regulatory element in the igκ locus. Frontiers in Immunology. 5: 240. PMID 24904588 DOI: 10.3389/Fimmu.2014.00240 |
0.376 |
|
| 2014 |
Ludwig G, Nejman D, Hecht M, Orlanski S, Abu-Remaileh M, Yanuka O, Sandler O, Marx A, Roberts D, Benvenisty N, Bergman Y, Mendelsohn M, Cedar H. Aberrant DNA methylation in ES cells. Plos One. 9: e96090. PMID 24852222 DOI: 10.1371/Journal.Pone.0096090 |
0.728 |
|
| 2014 |
Popowski M, Templeton TD, Lee BK, Rhee C, Li H, Miner C, Dekker JD, Orlanski S, Bergman Y, Iyer VR, Webb CF, Tucker H. Bright/Arid3A acts as a barrier to somatic cell reprogramming through direct regulation of Oct4, Sox2, and Nanog. Stem Cell Reports. 2: 26-35. PMID 24511468 DOI: 10.1016/J.Stemcr.2013.12.002 |
0.436 |
|
| 2013 |
Bergman Y, Cedar H. DNA methylation dynamics in health and disease. Nature Structural & Molecular Biology. 20: 274-81. PMID 23463312 DOI: 10.1038/Nsmb.2518 |
0.417 |
|
| 2013 |
Bergman Y, Cedar H. Erratum: DNA methylation dynamics in health and disease Nature Structural & Molecular Biology. 20: 1236-1236. DOI: 10.1038/Nsmb1013-1236A |
0.304 |
|
| 2012 |
Farago M, Rosenbluh C, Tevlin M, Fraenkel S, Schlesinger S, Masika H, Gouzman M, Teng G, Schatz D, Rais Y, Hanna JH, Mildner A, Jung S, Mostoslavsky G, Cedar H, ... Bergman Y, et al. Clonal allelic predetermination of immunoglobulin-κ rearrangement Nature. 490: 561-565. PMID 23023124 DOI: 10.1038/Nature11496 |
0.643 |
|
| 2012 |
Cedar H, Bergman Y. Programming of DNA methylation patterns. Annual Review of Biochemistry. 81: 97-117. PMID 22404632 DOI: 10.1146/Annurev-Biochem-052610-091920 |
0.502 |
|
| 2012 |
Levin‐Klein R, Bergman Y. Epigenetics of the Immune System Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.201100013 |
0.486 |
|
| 2011 |
Cedar H, Bergman Y. Epigenetics of haematopoietic cell development. Nature Reviews. Immunology. 11: 478-88. PMID 21660052 DOI: 10.1038/Nri2991 |
0.514 |
|
| 2010 |
Bergman Y, Cedar H. Epigenetic control of recombination in the immune system. Seminars in Immunology. 22: 323-9. PMID 20832333 DOI: 10.1016/J.Smim.2010.07.003 |
0.481 |
|
| 2010 |
Abu-Remaileh M, Gerson A, Farago M, Nathan G, Alkalay I, Zins Rousso S, Gur M, Fainsod A, Bergman Y. Oct-3/4 regulates stem cell identity and cell fate decisions by modulating Wnt/β-catenin signalling. The Embo Journal. 29: 3236-48. PMID 20736927 DOI: 10.1038/Emboj.2010.200 |
0.676 |
|
| 2009 |
Cedar H, Bergman Y. Epigenetic silencing during early lineage commitment Stembook. PMID 20614588 DOI: 10.3824/Stembook.1.42.1 |
0.511 |
|
| 2009 |
Schlesinger S, Selig S, Bergman Y, Cedar H. Allelic inactivation of rDNA loci. Genes & Development. 23: 2437-47. PMID 19833769 DOI: 10.1101/Gad.544509 |
0.465 |
|
| 2009 |
Cedar H, Bergman Y. Linking DNA methylation and histone modification: patterns and paradigms. Nature Reviews. Genetics. 10: 295-304. PMID 19308066 DOI: 10.1038/Nrg2540 |
0.453 |
|
| 2008 |
Epsztejn-Litman S, Feldman N, Abu-Remaileh M, Shufaro Y, Gerson A, Ueda J, Deplus R, Fuks F, Shinkai Y, Cedar H, Bergman Y. De novo DNA methylation promoted by G9a prevents reprogramming of embryonically silenced genes. Nature Structural & Molecular Biology. 15: 1176-83. PMID 18953337 DOI: 10.1038/Nsmb.1476 |
0.72 |
|
| 2008 |
Cedar H, Bergman Y. Choreography of Ig allelic exclusion. Current Opinion in Immunology. 20: 308-17. PMID 18400481 DOI: 10.1016/J.Coi.2008.02.002 |
0.463 |
|
| 2007 |
Fraenkel S, Mostoslavsky R, Novobrantseva TI, Pelanda R, Chaudhuri J, Esposito G, Jung S, Alt FW, Rajewsky K, Cedar H, Bergman Y. Allelic 'choice' governs somatic hypermutation in vivo at the immunoglobulin kappa-chain locus. Nature Immunology. 8: 715-22. PMID 17546032 DOI: 10.1038/Ni1476 |
0.567 |
|
| 2007 |
Schlesinger Y, Straussman R, Keshet I, Farkash S, Hecht M, Zimmerman J, Eden E, Yakhini Z, Ben-Shushan E, Reubinoff BE, Bergman Y, Simon I, Cedar H. Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer. Nature Genetics. 39: 232-6. PMID 17200670 DOI: 10.1038/Ng1950 |
0.455 |
|
| 2006 |
Fraenkel S, Bergman Y. Variability and exclusion in host and parasite: epigenetic regulation of Ig and var expression. Journal of Immunology (Baltimore, Md. : 1950). 177: 5767-74. PMID 17056499 DOI: 10.4049/Jimmunol.177.9.5767 |
0.378 |
|
| 2006 |
Feldman N, Gerson A, Fang J, Li E, Zhang Y, Shinkai Y, Cedar H, Bergman Y. G9a-mediated irreversible epigenetic inactivation of Oct-3/4 during early embryogenesis. Nature Cell Biology. 8: 188-94. PMID 16415856 DOI: 10.1038/Ncb1353 |
0.476 |
|
| 2005 |
Goldmit M, Ji Y, Skok J, Roldan E, Jung S, Cedar H, Bergman Y. Epigenetic ontogeny of the Igk locus during B cell development. Nature Immunology. 6: 198-203. PMID 15619624 DOI: 10.1038/Ni1154 |
0.466 |
|
| 2004 |
Bergman Y, Cedar H. A stepwise epigenetic process controls immunoglobulin allelic exclusion. Nature Reviews. Immunology. 4: 753-61. PMID 15459667 DOI: 10.1038/Nri1458 |
0.512 |
|
| 2004 |
Goldmit M, Bergman Y. Monoallelic gene expression: a repertoire of recurrent themes. Immunological Reviews. 200: 197-214. PMID 15242406 DOI: 10.1111/J.0105-2896.2004.00158.X |
0.506 |
|
| 2003 |
Gidekel S, Pizov G, Bergman Y, Pikarsky E. Oct-3/4 is a dose-dependent oncogenic fate determinant. Cancer Cell. 4: 361-70. PMID 14667503 DOI: 10.1016/S1535-6108(03)00270-8 |
0.393 |
|
| 2003 |
Ji Y, Zhang J, Lee AI, Cedar H, Bergman Y. A multistep mechanism for the activation of rearrangement in the immune system. Proceedings of the National Academy of Sciences of the United States of America. 100: 7557-62. PMID 12802019 DOI: 10.1073/Pnas.0932635100 |
0.496 |
|
| 2003 |
Bergman Y, Fisher A, Cedar H. Epigenetic mechanisms that regulate antigen receptor gene expression. Current Opinion in Immunology. 15: 176-81. PMID 12633667 DOI: 10.1016/S0952-7915(03)00016-5 |
0.423 |
|
| 2003 |
Singh N, Bergman Y, Cedar H, Chess A. Biallelic germline transcription at the kappa immunoglobulin locus. The Journal of Experimental Medicine. 197: 743-50. PMID 12629064 DOI: 10.1084/Jem.20021392 |
0.459 |
|
| 2002 |
Goldmit M, Schlissel M, Cedar H, Bergman Y. Differential accessibility at the kappa chain locus plays a role in allelic exclusion. The Embo Journal. 21: 5255-61. PMID 12356741 DOI: 10.1093/Emboj/Cdf518 |
0.456 |
|
| 2002 |
Gidekel S, Bergman Y. A unique developmental pattern of Oct-3/4 DNA methylation is controlled by a cis-demodification element. The Journal of Biological Chemistry. 277: 34521-30. PMID 12110668 DOI: 10.1074/Jbc.M203338200 |
0.52 |
|
| 2001 |
Mostoslavsky R, Singh N, Tenzen T, Goldmit M, Gabay C, Elizur S, Qi P, Reubinoff BE, Chess A, Cedar H, Bergman Y. Asynchronous replication and allelic exclusion in the immune system. Nature. 414: 221-5. PMID 11700561 DOI: 10.1038/35102606 |
0.413 |
|
| 2000 |
Barnea E, Bergman Y. Synergy of SF1 and RAR in activation of Oct-3/4 promoter. Journal of Biological Chemistry. 275: 6608-6619. PMID 10692469 DOI: 10.1074/Jbc.275.9.6608 |
0.42 |
|
| 1999 |
Mostoslavsky R, Kirillov A, Ji YH, Goldmit M, Holzmann M, Wirth T, Cedar H, Bergman Y. Demethylation and the establishment of kappa allelic exclusion. Cold Spring Harbor Symposia On Quantitative Biology. 64: 197-206. PMID 11232285 DOI: 10.1101/Sqb.1999.64.197 |
0.3 |
|
| 1999 |
Bergman Y. Allelic exclusion in B and T lymphopoiesis. Seminars in Immunology. 11: 319-328. PMID 10497086 DOI: 10.1006/Smim.1999.0188 |
0.348 |
|
| 1999 |
Cedar H, Bergman Y. Developmental regulation of immune system gene rearrangement. Current Opinion in Immunology. 11: 64-9. PMID 10047543 DOI: 10.1016/S0952-7915(99)80012-0 |
0.425 |
|
| 1998 |
Mostoslavsky R, Singh N, Kirillov A, Pelanda R, Cedar H, Chess A, Bergman Y. Kappa chain monoallelic demethylation and the establishment of allelic exclusion. Genes & Development. 12: 1801-11. PMID 9637682 DOI: 10.1101/Gad.12.12.1801 |
0.408 |
|
| 1998 |
Bergman Y, Mostoslavsky R. DNA demethylation: turning genes on. Biological Chemistry. 379: 401-7. PMID 9628330 DOI: 10.1515/BCHM.1998.379.4-5.401 |
0.363 |
|
| 1998 |
Ben-Shushan E, Thompson JR, Gudas LJ, Bergman Y. Rex-1, a gene encoding a transcription factor expressed in the early embryo, is regulated via Oct-3/4 and Oct-6 binding to an octamer site and a novel protein, Rox-1, binding to an adjacent site Molecular and Cellular Biology. 18: 1866-1878. PMID 9528758 DOI: 10.1128/Mcb.18.4.1866 |
0.422 |
|
| 1998 |
Kistler B, Baumann B, Bergman Y, Wirth T. RelB is a key player for both kappa B-dependent transcription and demethylation in B cells. Immunobiology. 198: 24-34. PMID 9442375 DOI: 10.1016/S0171-2985(97)80024-1 |
0.367 |
|
| 1997 |
Mostoslavsky R, Bergman Y. DNA methylation: regulation of gene expression and role in the immune system. Biochimica Et Biophysica Acta. 1333. PMID 9294017 DOI: 10.1016/S0304-419X(97)00010-3 |
0.462 |
|
| 1996 |
Kirillov A, Kistler B, Mostoslavsky R, Cedar H, Wirth T, Bergman Y. A role for nuclear NF-kappaB in B-cell-specific demethylation of the Igkappa locus. Nature Genetics. 13: 435-41. PMID 8696338 DOI: 10.1038/Ng0895-435 |
0.431 |
|
| 1996 |
Reich L, Sharir H, Ber R, Wirth T, Bergman Y, Laskov R. Coordinate suppression of myeloma-specific genes and expression of fibroblast-specific genes in myeloma X fibroblast somatic cell hybrids. Somatic Cell and Molecular Genetics. 22: 1-20. PMID 8643990 DOI: 10.1007/BF02374372 |
0.374 |
|
| 1995 |
Ben-Shushan E, Sharir H, Pikarsky E, Bergman Y. A dynamic balance between ARP-1/COUP-TFII, EAR-3/COUP-TFI, and retinoic acid receptor:retinoid X receptor heterodimers regulates Oct-3/4 expression in embryonal carcinoma cells. Molecular and Cellular Biology. 15: 1034-1048. PMID 7823919 DOI: 10.1128/Mcb.15.2.1034 |
0.384 |
|
| 1994 |
Pikarsky E, Sharir H, Ben-Shushan E, Bergman Y. Retinoic acid represses Oct-3/4 gene expression through several retinoic acid-responsive elements located in the promoter-enhancer region. Molecular and Cellular Biology. 14: 1026-1038. PMID 8289783 DOI: 10.1128/Mcb.14.2.1026 |
0.386 |
|
| 1994 |
Lichtenstein M, Keini G, Cedar H, Bergman Y. B cell-specific demethylation: a novel role for the intronic kappa chain enhancer sequence. Cell. 76: 913-23. PMID 8124725 DOI: 10.1016/0092-8674(94)90365-4 |
0.457 |
|
| 1993 |
Ben-Shushan E, Pikarsky E, Klar A, Bergman Y. Extinction of Oct-3/4 gene expression in embryonal carcinoma x fibroblast somatic cell hybrids is accompanied by changes in the methylation status, chromatin structure, and transcriptional activity of the Oct-3/4 upstream region. Molecular and Cellular Biology. 13: 891-901. PMID 7678695 DOI: 10.1128/Mcb.13.2.891 |
0.491 |
|
| 1990 |
Frank D, Lichtenstein M, Paroush Z, Bergman Y, Shani M, Razin A, Cedar H. Demethylation of genes in animal cells. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 326: 241-51. PMID 1968661 DOI: 10.1098/Rstb.1990.0008 |
0.473 |
|
| 1990 |
Bergman Y, Strich B, Sharir H, Ber R, Laskov R. Extinction of Ig genes expression in myeloma x fibroblast somatic cell hybrids is accompanied by repression of the oct-2 gene encoding a B-cell specific transcription factor. The Embo Journal. 9: 849-855. DOI: 10.1002/J.1460-2075.1990.Tb08182.X |
0.459 |
|
| 1989 |
Greenberg A, Hijazzi M, Sharir H, Cohen L, Bergman Y, Ber R, Laskov R. Extinction of expression of the translocated myc gene in somatic cell hybrids between mouse myeloma and L-cells. International Journal of Cancer. 43: 87-92. PMID 2492015 DOI: 10.1002/IJC.2910430118 |
0.325 |
|
| 1988 |
Liu JK, Bergman Y, Zaret KS. The mouse albumin promoter and a distal upstream site are simultaneously DNase I hypersensitive in liver chromatin and bind similar liver-abundant factors in vitro Genes &Amp; Development. 2: 528-541. PMID 3384331 DOI: 10.1101/Gad.2.5.528 |
0.353 |
|
| 1987 |
Einat P, Bergman Y, Yaffe D, Shani M. Expression in transgenic mice of two genes of different tissue specificity integrated into a single chromosomal site Genes &Amp; Development. 1: 1075-1084. PMID 3123313 DOI: 10.1101/Gad.1.10.1075 |
0.351 |
|
| 1984 |
Bergman Y, Rice D, Grosschedl R, Baltimore D. Two regulatory elements for immunoglobulin κ light chain gene expression Proceedings of the National Academy of Sciences of the United States of America. 81: 7041-7045. PMID 6438631 DOI: 10.1073/Pnas.81.22.7041 |
0.527 |
|
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