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An-Suei Yang - Publications

Affiliations: 
1981-1987 Chemistry Johns Hopkins University, Baltimore, MD 
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Jian JW, Chen HS, Chiu YK, Peng HP, Tung CP, Chen IC, Yu CM, Tsou YL, Kuo WY, Hsu HJ, Yang AS. Effective binding to protein antigens by antibodies from antibody libraries designed with enhanced protein recognition propensities. Mabs. PMID 30526270 DOI: 10.1080/19420862.2018.1550320  0.318
2016 Jian JW, Elumalai P, Pitti T, Wu CY, Tsai KC, Chang JY, Peng HP, Yang AS. Predicting Ligand Binding Sites on Protein Surfaces by 3-Dimensional Probability Density Distributions of Interacting Atoms. Plos One. 11: e0160315. PMID 27513851 DOI: 10.1371/Journal.Pone.0160315  0.355
2014 Peng HP, Lee KH, Jian JW, Yang AS. Origins of specificity and affinity in antibody-protein interactions. Proceedings of the National Academy of Sciences of the United States of America. 111: E2656-65. PMID 24938786 DOI: 10.1073/Pnas.1401131111  0.343
2014 Mahalingam R, Peng HP, Yang AS. Prediction of fatty acid-binding residues on protein surfaces with three-dimensional probability distributions of interacting atoms. Biophysical Chemistry. 192: 10-9. PMID 24934883 DOI: 10.1016/J.Bpc.2014.05.002  0.333
2014 Mahalingam R, Peng HP, Yang AS. Prediction of FMN-binding residues with three-dimensional probability distributions of interacting atoms on protein surfaces. Journal of Theoretical Biology. 343: 154-61. PMID 24211525 DOI: 10.1016/J.Jtbi.2013.10.020  0.369
2014 Hsu HJ, Yang AS. Substrate phage display for protease substrate sequence characterization: bovine factor Xa as a model system. Methods in Molecular Biology (Clifton, N.J.). 1088: 107-24. PMID 24146400 DOI: 10.1007/978-1-62703-673-3_8  0.3
2014 Chang HJ, Yang AS. Design of phage-displayed cystine-stabilized mini-protein libraries for proteinaceous binder engineering. Methods in Molecular Biology (Clifton, N.J.). 1088: 1-17. PMID 24146393 DOI: 10.1007/978-1-62703-673-3_1  0.344
2012 Tsai KC, Jian JW, Yang EW, Hsu PC, Peng HP, Chen CT, Chen JB, Chang JY, Hsu WL, Yang AS. Prediction of carbohydrate binding sites on protein surfaces with 3-dimensional probability density distributions of interacting atoms. Plos One. 7: e40846. PMID 22848404 DOI: 10.1371/Journal.Pone.0040846  0.36
2012 Chen CT, Peng HP, Jian JW, Tsai KC, Chang JY, Yang EW, Chen JB, Ho SY, Hsu WL, Yang AS. Protein-protein interaction site predictions with three-dimensional probability distributions of interacting atoms on protein surfaces. Plos One. 7: e37706. PMID 22701576 DOI: 10.1371/Journal.Pone.0037706  0.355
2009 Chang HJ, Hsu HJ, Chang CF, Peng HP, Sun YK, Yu HM, Shih HC, Song CY, Lin YT, Chen CC, Wang CH, Yang AS. Molecular evolution of cystine-stabilized miniproteins as stable proteinaceous binders. Structure (London, England : 1993). 17: 620-31. PMID 19368895 DOI: 10.1016/J.Str.2009.01.011  0.351
2007 Peng HP, Yang AS. Modeling protein loops with knowledge-based prediction of sequence-structure alignment. Bioinformatics (Oxford, England). 23: 2836-42. PMID 17827204 DOI: 10.1093/Bioinformatics/Btm456  0.344
2007 Shao YM, Yang WB, Peng HP, Hsu MF, Tsai KC, Kuo TH, Wang AH, Liang PH, Lin CH, Yang AS, Wong CH. Structure-based design and synthesis of highly potent SARS-CoV 3CL protease inhibitors. Chembiochem : a European Journal of Chemical Biology. 8: 1654-7. PMID 17722121 DOI: 10.1002/Cbic.200700254  0.315
2006 Hsu HJ, Chang HJ, Peng HP, Huang SS, Lin MY, Yang AS. Assessing computational amino acid beta-turn propensities with a phage-displayed combinatorial library and directed evolution. Structure (London, England : 1993). 14: 1499-510. PMID 17027499 DOI: 10.1016/J.Str.2006.08.006  0.318
2004 Kuang R, Leslie CS, Yang AS. Protein backbone angle prediction with machine learning approaches. Bioinformatics (Oxford, England). 20: 1612-21. PMID 14988121 DOI: 10.1093/Bioinformatics/Bth136  0.329
2003 Yang AS, Wang LY. Local structure prediction with local structure-based sequence profiles. Bioinformatics (Oxford, England). 19: 1267-74. PMID 12835271 DOI: 10.1093/Bioinformatics/Btg151  0.312
2002 Yang AS, Wang LY. Local structure-based sequence profile database for local and global protein structure predictions. Bioinformatics (Oxford, England). 18: 1650-7. PMID 12490450 DOI: 10.1093/Bioinformatics/18.12.1650  0.33
2000 Yang AS, Honig B. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments. Journal of Molecular Biology. 301: 691-711. PMID 10966778 DOI: 10.1006/Jmbi.2000.3975  0.365
2000 Yang AS, Honig B. An integrated approach to the analysis and modeling of protein sequences and structures. II. On the relationship between sequence and structural similarity for proteins that are not obviously related in sequence Journal of Molecular Biology. 301: 679-689. PMID 10966777 DOI: 10.1006/Jmbi.2000.3974  0.334
2000 Yang AS, Honig B. An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance Journal of Molecular Biology. 301: 665-678. PMID 10966776 DOI: 10.1006/Jmbi.2000.3973  0.347
1999 Yang AS, Honig B. Sequence to structure alignment in comparative modeling using PrISM Proteins: Structure, Function and Genetics. 37: 66-72. PMID 10526354 DOI: 10.1002/(Sici)1097-0134(1999)37:3+<66::Aid-Prot10>3.0.Co;2-K  0.326
1996 Yang AS, Hitz B, Honig B. Free energy determinants of secondary structure formation: III. β-turns and their role in protein folding Journal of Molecular Biology. 259: 873-882. PMID 8683589 DOI: 10.1006/Jmbi.1996.0364  0.338
1995 Honig B, Yang AS. Free energy balance in protein folding Advances in Protein Chemistry. 46: 27-58. PMID 7771321 DOI: 10.1016/S0065-3233(08)60331-9  0.322
1994 Yang AS, Honig B. Structural origins of pH and ionic strength effects on protein stability: Acid denaturation of sperm whale apomyoglobin Journal of Molecular Biology. 237: 602-614. PMID 8158640 DOI: 10.1006/Jmbi.1994.1258  0.305
1993 Yang AS, Honig B. On the pH dependence of protein stability Journal of Molecular Biology. 231: 459-474. PMID 8510157 DOI: 10.1006/Jmbi.1993.1294  0.306
1992 Yang AS, Sharp KA, Honig B. Analysis of the heat capacity dependence of protein folding Journal of Molecular Biology. 227: 889-900. PMID 1404393 DOI: 10.1016/0022-2836(92)90229-D  0.33
1992 Yang AS, Honig B. Electrostatic effects on protein stability. Current Opinion in Structural Biology 1992, 2:40...-45 Current Opinion in Structural Biology. 2: 40-45. DOI: 10.1016/0959-440X(92)90174-6  0.321
1990 Yang AS, Gaffney BJ. EPR detection of kinetic responses to photochemically generated protein cofactors Journal of Magnetic Resonance (1969). 90: 580-583. DOI: 10.1016/0022-2364(90)90065-H  0.577
1987 Yang AS, Gaffney BJ. Determination of relative spin concentration in some high-spin ferric proteins using E/D-distribution in electron paramagnetic resonance simulations. Biophysical Journal. 51: 55-67. PMID 3026504 DOI: 10.1016/S0006-3495(87)83311-8  0.552
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