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Priya S. Shah, Ph.D. - Publications

Affiliations: 
2001-2005 Chemical Engineering Massachusetts Institute of Technology, Cambridge, MA, United States 
 2005-2011 Chemical Engineering University of California, Berkeley, Berkeley, CA, United States 
 2012-2017 Cellular and Molecular Pharmacology University of California, San Francisco, San Francisco, CA 
 2017- Chemical Engineering University of California, Davis, Davis, CA 
Area:
systems biology, biomolecular engineering
Website:
https://shahlab.ucdavis.edu/
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gonzalez Lopez Ledesma MM, Costa Navarro G, Pallares HM, Paletta A, De Maio F, Iglesias NG, Gebhard L, Oviedo Rouco S, Ojeda DS, de Borba L, Giraldo M, Rajsbaum R, Ceballos A, Krogan NJ, Shah PS, et al. Dengue virus NS5 degrades ERC1 during infection to antagonize NF-kB activation. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220005120. PMID 37252973 DOI: 10.1073/pnas.2220005120  0.506
2023 Kenaston MW, Shah PS. The Archer and the Prey: The Duality of PAF1C in Antiviral Immunity. Viruses. 15. PMID 37243120 DOI: 10.3390/v15051032  0.306
2023 Link N, Harnish JM, Hull B, Gibson S, Dietze M, Mgbike UE, Medina-Balcazar S, Shah PS, Yamamoto S. A Zika virus protein expression screen in to investigate targeted host pathways during development. Biorxiv : the Preprint Server For Biology. PMID 37163061 DOI: 10.1101/2023.04.28.538736  0.336
2023 Leon KE, Khalid MM, Flynn RA, Fontaine KA, Nguyen TT, Kumar GR, Simoneau CR, Tomar S, Jimenez-Morales D, Dunlap M, Kaye J, Shah PS, Finkbeiner S, Krogan NJ, Bertozzi C, et al. Nuclear accumulation of host transcripts during Zika Virus Infection. Plos Pathogens. 19: e1011070. PMID 36603024 DOI: 10.1371/journal.ppat.1011070  0.521
2022 Shah PS, Beesabathuni NS, Fishburn AT, Kenaston MW, Minami SA, Pham OH, Tucker I. Systems Biology of Virus-Host Protein Interactions: From Hypothesis Generation to Mechanisms of Replication and Pathogenesis. Annual Review of Virology. PMID 35576593 DOI: 10.1146/annurev-virology-100520-011851  0.326
2022 Fishburn AT, Pham OH, Kenaston MW, Beesabathuni NS, Shah PS. Let's Get Physical: Flavivirus-Host Protein-Protein Interactions in Replication and Pathogenesis. Frontiers in Microbiology. 13: 847588. PMID 35308381 DOI: 10.3389/fmicb.2022.847588  0.315
2019 Link N, Chung H, Jolly A, Withers M, Tepe B, Arenkiel BR, Shah PS, Krogan NJ, Aydin H, Geckinli BB, Tos T, Isikay S, Tuysuz B, Mochida GH, Thomas AX, et al. Mutations in ANKLE2, a ZIKA Virus Target, Disrupt an Asymmetric Cell Division Pathway in Drosophila Neuroblasts to Cause Microcephaly. Developmental Cell. PMID 31735666 DOI: 10.1016/J.Devcel.2019.10.009  0.511
2019 Li M, Johnson JR, Truong B, Kim G, Weinbren N, Dittmar M, Shah PS, Von Dollen J, Newton BW, Jang GM, Krogan NJ, Cherry S, Ramage H. Identification of antiviral roles for the exon-junction complex and nonsense-mediated decay in flaviviral infection. Nature Microbiology. PMID 30833725 DOI: 10.1038/S41564-019-0375-Z  0.596
2018 Petit MJ, Shah PS. Mapping Arbovirus-Vector Interactions Using Systems Biology Techniques. Frontiers in Cellular and Infection Microbiology. 8: 440. PMID 30666300 DOI: 10.3389/Fcimb.2018.00440  0.333
2018 Shah PS, Link N, Jang GM, Sharp PP, Zhu T, Swaney DL, Johnson JR, Von Dollen J, Ramage HR, Satkamp L, Newton B, Hüttenhain R, Petit MJ, Baum T, Everitt A, et al. Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis. Cell. 175: 1931-1945.e18. PMID 30550790 DOI: 10.1016/J.Cell.2018.11.028  0.668
2018 Fontaine KA, Leon KE, Khalid MM, Tomar S, Jimenez-Morales D, Dunlap M, Kaye JA, Shah PS, Finkbeiner S, Krogan NJ, Ott M. The Cellular NMD Pathway Restricts Zika Virus Infection and Is Targeted by the Viral Capsid Protein. Mbio. 9. PMID 30401782 DOI: 10.1128/Mbio.02126-18  0.573
2018 Eckhardt M, Zhang W, Gross AM, Von Dollen J, Johnson JR, Franks-Skiba KE, Swaney DL, Johnson TL, Jang GM, Shah PS, Brand TM, Archambault J, Kreisberg JF, Grandis JR, Ideker T, et al. Multiple Routes to Oncogenesis are Promoted by the Human Papillomavirus-Host Protein Network. Cancer Discovery. PMID 30209081 DOI: 10.1158/2159-8290.Cd-17-1018  0.512
2016 De Maio FA, Risso G, Iglesias NG, Shah P, Pozzi B, Gebhard LG, Mammi P, Mancini E, Yanovsky MJ, Andino R, Krogan N, Srebrow A, Gamarnik AV. The Dengue Virus NS5 Protein Intrudes in the Cellular Spliceosome and Modulates Splicing. Plos Pathogens. 12: e1005841. PMID 27575636 DOI: 10.1371/Journal.Ppat.1005841  0.683
2016 Heaton NS, Moshkina N, Fenouil R, Gardner TJ, Aguirre S, Shah PS, Zhao N, Manganaro L, Hultquist JF, Noel J, Sachs DH, Hamilton J, Leon PE, Chawdury A, Tripathi S, et al. Targeting Viral Proteostasis Limits Influenza Virus, HIV, and Dengue Virus Infection. Immunity. 44: 46-58. PMID 26789921 DOI: 10.1016/J.Immuni.2015.12.017  0.599
2016 Heaton NS, Moshkina N, Fenouil R, Gardner TJ, Aguirre S, Shah PS, Zhao N, Manganaro L, Hultquist JF, Noel J, Sachs D, Hamilton J, Leon PE, Chawdury A, Tripathi S, et al. Corrections to Targeting Viral Proteostasis Limits Influenza Virus, HIV, and Dengue Virus Infection. (Immunity 44, 46-58, January 19, 2016) Immunity. 44: 438. DOI: 10.1016/J.Immuni.2016.01.016  0.577
2015 Shah PS, Wojcechowskyj JA, Eckhardt M, Krogan NJ. Comparative mapping of host-pathogen protein-protein interactions. Current Opinion in Microbiology. 27: 62-68. PMID 26275922 DOI: 10.1016/J.Mib.2015.07.008  0.515
2015 Ramage HR, Kumar GR, Verschueren E, Johnson JR, Von Dollen J, Johnson T, Newton B, Shah P, Horner J, Krogan NJ, Ott M. A combined proteomics/genomics approach links hepatitis C virus infection with nonsense-mediated mRNA decay. Molecular Cell. 57: 329-40. PMID 25616068 DOI: 10.1016/J.Molcel.2014.12.028  0.534
2013 Miller-Jensen K, Skupsky R, Shah PS, Arkin AP, Schaffer DV. Genetic selection for context-dependent stochastic phenotypes: Sp1 and TATA mutations increase phenotypic noise in HIV-1 gene expression. Plos Computational Biology. 9: e1003135. PMID 23874178 DOI: 10.1371/Journal.Pcbi.1003135  0.562
2012 Shah PS, Schaffer DV. Response to "HIV Escape From RNAi Antivirals: Yet Another Houdini Action?" Molecular Therapy. Nucleic Acids. 1: e28. PMID 28187853 DOI: 10.1038/mtna.2012.23  0.462
2012 Shah PS, Schaffer DV. Response to "HIV Escape From RNAi Antivirals: Yet Another Houdini Action?". Molecular Therapy. Nucleic Acids. 1: e28. PMID 23344080 DOI: 10.1038/Mtna.2012.23  0.535
2012 Ashton RS, Conway A, Pangarkar C, Bergen J, Lim KI, Shah P, Bissell M, Schaffer DV. Astrocytes regulate adult hippocampal neurogenesis through ephrin-B signaling. Nature Neuroscience. 15: 1399-406. PMID 22983209 DOI: 10.1038/Nn.3212  0.607
2012 Shah PS, Pham NP, Schaffer DV. HIV develops indirect cross-resistance to combinatorial RNAi targeting two distinct and spatially distant sites. Molecular Therapy : the Journal of the American Society of Gene Therapy. 20: 840-8. PMID 22294151 DOI: 10.1038/Mt.2012.3  0.572
2011 Shah PS, Schaffer DV. Antiviral RNAi: translating science towards therapeutic success. Pharmaceutical Research. 28: 2966-82. PMID 21826573 DOI: 10.1007/S11095-011-0549-8  0.54
2010 Aviran S, Shah PS, Schaffer DV, Arkin AP. Computational models of HIV-1 resistance to gene therapy elucidate therapy design principles. Plos Computational Biology. 6. PMID 20711350 DOI: 10.1371/Journal.Pcbi.1000883  0.562
2010 Shah PS, Schaffer DV. Gene therapy takes a cue from HAART: combinatorial antiviral therapeutics reach the clinic. Science Translational Medicine. 2: 36ps30. PMID 20555021 DOI: 10.1126/Scitranslmed.3001298  0.515
2009 Burnett JC, Miller-Jensen K, Shah PS, Arkin AP, Schaffer DV. Control of stochastic gene expression by host factors at the HIV promoter. Plos Pathogens. 5: e1000260. PMID 19132086 DOI: 10.1371/Journal.Ppat.1000260  0.641
2008 Leonard JN, Shah PS, Burnett JC, Schaffer DV. HIV evades RNA interference directed at TAR by an indirect compensatory mechanism. Cell Host & Microbe. 4: 484-94. PMID 18996348 DOI: 10.1016/J.Chom.2008.09.008  0.705
2004 Vahedi-Faridi A, Brault PA, Shah P, Kim YW, Dunham WR, Funk MO. Interaction between Non-Heme Iron of Lipoxygenases and Cumene Hydroperoxide: Basis for Enzyme Activation, Inactivation, and Inhibition Journal of the American Chemical Society. 126: 2006-2015. PMID 14971933 DOI: 10.1021/Ja0390855  0.598
2002 Brault PA, Kariapper MS, Pham CV, Flowers RA, Gunning WT, Shah P, Funk MO. Protein micelles from lipoxygenase 3. Biomacromolecules. 3: 649-54. PMID 12099806 DOI: 10.1021/Bm010149I  0.605
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