Stefan Aigner, Ph.D. - Related publications

University of Colorado, Boulder, Boulder, CO, United States 
RNA (ribozyme) catalysis
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25 most relevant papers in past 60 days:
Year Citation  Score
2022 Aditham A, Shi H, Guo J, Zeng H, Zhou Y, Wade SD, Huang J, Liu J, Wang X. Chemically Modified mocRNAs for Highly Efficient Protein Expression in Mammalian Cells. Acs Chemical Biology. PMID 34995053 DOI: 10.1021/acschembio.1c00569   
2022 Malla S, Prasad Bhattarai D, Groza P, Melguizo-Sanchis D, Atanasoai I, Martinez-Gamero C, Román ÁC, Zhu D, Lee DF, Kutter C, Aguilo F. ZFP207 sustains pluripotency by coordinating OCT4 stability, alternative splicing and RNA export. Embo Reports. e53191. PMID 35037361 DOI: 10.15252/embr.202153191   
2022 Wright DJ, Hall NAL, Irish N, Man AL, Glynn W, Mould A, Angeles AL, Angiolini E, Swarbreck D, Gharbi K, Tunbridge EM, Haerty W. Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes. Bmc Genomics. 23: 42. PMID 35012468 DOI: 10.1186/s12864-021-08261-2   
2022 He XY, Fang X, Luo BY, Qiu GF. Identification and characterization of a new germline-specific marker vasa gene and its promoter in the giant freshwater prawn Macrobrachium rosenbergii. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 110716. PMID 34999221 DOI: 10.1016/j.cbpb.2022.110716   
2022 Yan Q, Chen Y, Liu H, Li G, Liang C, Hao Z. Effects of alternative splicing events and transcriptome changes on kidney stone formation. Urolithiasis. PMID 34997271 DOI: 10.1007/s00240-021-01293-z   
2022 Zhou X, Gao F, Lu M, Liu Z, Wang M, Cao J, Ke X, Yi M. DDX43 recruits TRIF or IPS-1 as an adaptor and activates the IFN-β pathway in Nile tilapia (Oreochromis niloticus). Molecular Immunology. 143: 7-16. PMID 34990938 DOI: 10.1016/j.molimm.2021.12.020   
2022 Nikonova E, Mukherjee A, Kamble K, Barz C, Nongthomba U, Spletter ML. Rbfox1 is required for myofibril development and maintaining fiber type-specific isoform expression in muscles. Life Science Alliance. 5. PMID 34996845 DOI: 10.26508/lsa.202101342   
2022 Xu SM, Curry-Hyde A, Sytnyk V, Janitz M. RNA polyadenylation patterns in the human transcriptome. Gene. 146133. PMID 34998928 DOI: 10.1016/j.gene.2021.146133   
2022 Darzacq X, Tjian R. Weak multivalent biomolecular interactions: a strength versus numbers tug of war with implications for phase partitioning. Rna (New York, N.Y.). 28: 48-51. PMID 34772790 DOI: 10.1261/rna.079004.121   
2022 Dhingra DM, Ooi AT, Ruff DW. Simultaneous DNA, RNA, and Protein Analysis from Single Cells Using a High-Throughput Microfluidic Workflow for Resolution of Genotype-to-Phenotype Modalities. Methods in Molecular Biology (Clifton, N.J.). 2386: 289-307. PMID 34766277 DOI: 10.1007/978-1-0716-1771-7_17   
2022 Paira S, Das B. Determination of the Stability and Intracellular (Intra-Nuclear) Targeting and Recruitment of Pre-HAC1 mRNA in the Saccharomyces cerevisiae During the Activation of UPR. Methods in Molecular Biology (Clifton, N.J.). 2378: 121-140. PMID 34985698 DOI: 10.1007/978-1-0716-1732-8_9   
2022 Gan J, Chen Z, Feng X, Wei Z, Zhang S, Du Y, Xu C, Zhao H. Expression profiling of lncRNAs and mRNAs in placental site trophoblastic tumor (PSTT) by microarray. International Journal of Medical Sciences. 19: 1-12. PMID 34975294 DOI: 10.7150/ijms.65002   
2022 Peng H, Guo X, He J, Duan C, Yang M, Zhang X, Zhang L, Fu R, Wang B, Wang D, Chen H, Xie M, Feng P, Dai L, Tang X, et al. Intracranial delivery of synthetic mRNA to suppress glioblastoma. Molecular Therapy Oncolytics. 24: 160-170. PMID 35024442 DOI: 10.1016/j.omto.2021.12.010   
2022 Maron MI, Casill AD, Gupta V, Roth JS, Sidoli S, Query CC, Gamble MJ, Shechter D. Type I and II PRMTs inversely regulate post-transcriptional intron detention through Sm and CHTOP methylation. Elife. 11. PMID 34984976 DOI: 10.7554/eLife.72867   
2022 Kwak Y, Kwak H. Genome-Wide Identification of Polyadenylation Dynamics with TED-Seq. Methods in Molecular Biology (Clifton, N.J.). 2404: 281-298. PMID 34694615 DOI: 10.1007/978-1-0716-1851-6_15   
2022 Huang R, Li M, Zeng Z, Zhang J, Song D, Hu P, Yan P, Xian S, Zhu X, Chang Z, Zhang J, Guo J, Yin H, Meng T, Huang Z. The Identification of Prognostic and Metastatic Alternative Splicing in Skin Cutaneous Melanoma. Cancer Control : Journal of the Moffitt Cancer Center. 29: 10732748211051554. PMID 34986671 DOI: 10.1177/10732748211051554   
2022 Campbell AM, De La Cruz Herrera CF, Marcon E, Greenblatt J, Frappier L. Epstein-Barr Virus BGLF2 commandeers RISC to interfere with cellular miRNA function. Plos Pathogens. 18: e1010235. PMID 35007297 DOI: 10.1371/journal.ppat.1010235   
2022 Sajeev N, Baral A, America AHP, Willems LAJ, Merret R, Bentsink L. The mRNA-binding proteome of a critical phase transition during Arabidopsis seed germination. The New Phytologist. 233: 251-264. PMID 34643285 DOI: 10.1111/nph.17800   
2022 Han C, Sun L, Pan Q, Sun Y, Wang W, Chen Y. Polysome profiling followed by quantitative PCR for identifying potential micropeptide encoding long non-coding RNAs in suspension cell lines. Star Protocols. 3: 101037. PMID 34977682 DOI: 10.1016/j.xpro.2021.101037   
2022 Budzak J, Jones R, Tschudi C, Kolev NG, Rudenko G. An assembly of nuclear bodies associates with the active VSG expression site in African trypanosomes. Nature Communications. 13: 101. PMID 35013170 DOI: 10.1038/s41467-021-27625-6   
2022 Chen C, Zhang X, Wang Y, Chen X, Chen W, Dan S, She S, Hu W, Dai J, Hu J, Cao Q, Liu Q, Huang Y, Qin B, Kang B, et al. Translational and post-translational control of human naïve versus primed pluripotency. Iscience. 25: 103645. PMID 35005567 DOI: 10.1016/j.isci.2021.103645   
2022 Gao Y, Lin KT, Jiang T, Yang Y, Rahman MA, Gong S, Bai J, Wang L, Sun J, Sheng L, Krainer AR, Hua Y. Systematic characterization of short intronic splicing-regulatory elements in SMN2 pre-mRNA. Nucleic Acids Research. PMID 35018432 DOI: 10.1093/nar/gkab1280   
2022 Xia J, Wang M, Zhu Y, Bu C, Li T. Differential mRNA and long noncoding RNA expression profiles in pediatric B-cell acute lymphoblastic leukemia patients. Bmc Pediatrics. 22: 10. PMID 34980027 DOI: 10.1186/s12887-021-03073-5   
2022 Tang P, Yang Y, Li G, Huang L, Wen M, Ruan W, Guo X, Zhang C, Zuo X, Luo D, Xu Y, Fu XD, Zhou Y. Alternative polyadenylation by sequential activation of distal and proximal PolyA sites. Nature Structural & Molecular Biology. PMID 35013598 DOI: 10.1038/s41594-021-00709-z   
2022 Lin Z, Liu H, Chen H, Cao H, Liu X, Zhu H, Zhao L, Chen Z. Rrp14 controls rRNA transcription via facilitating the translocation of Pol5 into the nucleolus. Cell Cycle (Georgetown, Tex.). 1-12. PMID 34974803 DOI: 10.1080/15384101.2021.2023303