Katherine R. Amato, Ph.D. - Publications

Affiliations: 
School of Integrative Biology University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Sun B, Xia Y, Davison S, Gomez A, Garber PA, Amato KR, Xu X, Xia DP, Wang X, Li JH. Assessing the Influence of Environmental Sources on the Gut Mycobiome of Tibetan Macaques. Frontiers in Microbiology. 12: 730477. PMID 34421885 DOI: 10.3389/fmicb.2021.730477  1
2021 Cortes-Ortiz L, Amato KR. Host genetics influence the gut microbiome. Science (New York, N.Y.). 373: 159-160. PMID 34244398 DOI: 10.1126/science.abj5287  0.08
2021 Amato KR, Arrieta MC, Azad MB, Bailey MT, Broussard JL, Bruggeling CE, Claud EC, Costello EK, Davenport ER, Dutilh BE, Swain Ewald HA, Ewald P, Hanlon EC, Julion W, Keshavarzian A, et al. The human gut microbiome and health inequities. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34161260 DOI: 10.1073/pnas.2017947118  0.01
2021 Mallott EK, Amato KR. Host specificity of the gut microbiome. Nature Reviews. Microbiology. PMID 34045709 DOI: 10.1038/s41579-021-00562-3  1
2021 Sun B, Xia Y, Garber PA, Amato KR, Gomez A, Xu X, Li W, Huang M, Xia D, Wang X, Li J. Captivity Is Associated With Gut Mycobiome Composition in Tibetan Macaques (). Frontiers in Microbiology. 12: 665853. PMID 33936022 DOI: 10.3389/fmicb.2021.665853  1
2021 Gomez A, Sharma AK, Mallott EK, Petrzelkova KJ, Jost Robinson CA, Yeoman CJ, Carbonero F, Pafco B, Rothman JM, Ulanov A, Vlckova K, Amato KR, Schnorr SL, Dominy NJ, Modry D, et al. Erratum for Gomez et al., "Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints". Msphere. 6. PMID 33731474 DOI: 10.1128/mSphere.00168-21  1
2021 Amato KR, Chaves ÓM, Mallott EK, Eppley TM, Abreu F, Baden AL, Barnett AA, Bicca-Marques JC, Boyle SA, Campbell CJ, Chapman CA, De la Fuente MF, Fan P, Fashing PJ, Felton A, et al. Fermented food consumption in wild nonhuman primates and its ecological drivers. American Journal of Physical Anthropology. PMID 33650680 DOI: 10.1002/ajpa.24257  1
2021 Manus MB, Kuthyar S, Perroni-Marañón AG, de la Mora AN, Amato KR. Comparing different sample collection and storage methods for field-based skin microbiome research. American Journal of Human Biology : the Official Journal of the Human Biology Council. e23584. PMID 33644952 DOI: 10.1002/ajhb.23584  1
2021 Baniel A, Amato KR, Beehner JC, Bergman TJ, Mercer A, Perlman RF, Petrullo L, Reitsema L, Sams S, Lu A, Snyder-Mackler N. Seasonal shifts in the gut microbiome indicate plastic responses to diet in wild geladas. Microbiome. 9: 26. PMID 33485388 DOI: 10.1186/s40168-020-00977-9  1
2021 Finlay BB, Amato KR, Azad M, Blaser MJ, Bosch TCG, Chu H, Dominguez-Bello MG, Ehrlich SD, Elinav E, Geva-Zatorsky N, Gros P, Guillemin K, Keck F, Korem T, McFall-Ngai MJ, et al. The hygiene hypothesis, the COVID pandemic, and consequences for the human microbiome. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33472859 DOI: 10.1073/pnas.2010217118  0.01
2021 Kuthyar S, Kowalewski MM, Roellig DM, Mallott EK, Zeng Y, Gillespie TR, Amato KR. Effects of anthropogenic habitat disturbance and infection on a sentinel species' gut bacteria. Ecology and Evolution. 11: 45-57. PMID 33437414 DOI: 10.1002/ece3.6910  1
2020 Narat V, Amato KR, Ranger N, Salmona M, Mercier-Delarue S, Rupp S, Ambata P, Njouom R, Simon F, Giles-Vernick T, LeGoff J. A multi-disciplinary comparison of great ape gut microbiota in a central African forest and European zoo. Scientific Reports. 10: 19107. PMID 33154444 DOI: 10.1038/s41598-020-75847-3  0.01
2020 Manus MB, Kuthyar S, Perroni-Marañón AG, Núñez-de la Mora A, Amato KR. Infant Skin Bacterial Communities Vary by Skin Site and Infant Age across Populations in Mexico and the United States. Msystems. 5. PMID 33144313 DOI: 10.1128/mSystems.00834-20  1
2020 Mallott EK, Amato KR. Phylosymbiosis, diet and gut microbiome-associated metabolic disease. Evolution, Medicine, and Public Health. 2020: 100-101. PMID 32983535 DOI: 10.1093/Emph/Eoaa019  1
2020 Mallott EK, Borries C, Koenig A, Amato KR, Lu A. Reproductive hormones mediate changes in the gut microbiome during pregnancy and lactation in Phayre's leaf monkeys. Scientific Reports. 10: 9961. PMID 32561791 DOI: 10.1038/S41598-020-66865-2  1
2020 Song SJ, Sanders JG, Delsuc F, Metcalf J, Amato K, Taylor MW, Mazel F, Lutz HL, Winker K, Graves GR, Humphrey G, Gilbert JA, Hackett SJ, White KP, Skeen HR, et al. Comparative Analyses of Vertebrate Gut Microbiomes Reveal Convergence between Birds and Bats. Mbio. 11. PMID 31911491 DOI: 10.1128/Mbio.02901-19  1
2020 Amato KR, Kuthyar S, Ekanayake‐Weber M, Salmi R, Snyder‐Mackler N, Wijayathunga L, Vandercone R, Lu A. Gut microbiome, diet, and conservation of endangered langurs in Sri Lanka Biotropica. DOI: 10.1111/Btp.12805  1
2019 Mallott EK, Malhi RS, Amato KR. Assessing the comparability of different DNA extraction and amplification methods in gut microbial community profiling. Access Microbiology. 1: e000060. PMID 32974545 DOI: 10.1099/acmi.0.000060  1
2019 Mann AE, Mazel F, Lemay MA, Morien E, Billy V, Kowalewski M, Di Fiore A, Link A, Goldberg TL, Tecot S, Baden AL, Gomez A, Sauther ML, Cuozzo FP, Rice GAO, ... ... Amato K, et al. Biodiversity of protists and nematodes in the wild nonhuman primate gut. The Isme Journal. PMID 31719654 DOI: 10.1038/S41396-019-0551-4  1
2019 Gupta A, Dhakan DB, Maji A, Saxena R, P K VP, Mahajan S, Pulikkan J, Kurian J, Gomez AM, Scaria J, Amato KR, Sharma AK, Sharma VK. Association of Flavonifractor plautii, a Flavonoid-Degrading Bacterium, with the Gut Microbiome of Colorectal Cancer Patients in India. Msystems. 4. PMID 31719139 DOI: 10.1128/mSystems.00438-19  0.01
2019 Frankel JS, Mallott EK, Hopper LM, Ross SR, Amato KR. The effect of captivity on the primate gut microbiome varies with host dietary niche. American Journal of Primatology. e23061. PMID 31713260 DOI: 10.1002/Ajp.23061  1
2019 Amato KR, Stumpf RM. Moving forward with the primate microbiome: Introduction to a special issue of the American Journal of Primatology. American Journal of Primatology. e23060. PMID 31608486 DOI: 10.1002/Ajp.23060  1
2019 Amato KR, Mallott EK, McDonald D, Dominy NJ, Goldberg T, Lambert JE, Swedell L, Metcalf JL, Gomez A, Britton GAO, Stumpf RM, Leigh SR, Knight R. Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny. Genome Biology. 20: 201. PMID 31590679 DOI: 10.1186/S13059-019-1807-Z  1
2019 Kuthyar S, Manus MB, Amato KR. Leveraging non-human primates for exploring the social transmission of microbes. Current Opinion in Microbiology. 50: 8-14. PMID 31585390 DOI: 10.1016/J.Mib.2019.09.001  1
2019 Amato KR, Jeyakumar T, Poinar H, Gros P. Shifting Climates, Foods, and Diseases: The Human Microbiome through Evolution. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900034. PMID 31524305 DOI: 10.1002/Bies.201900034  0.01
2019 Gomez A, Sharma AK, Mallott EK, Petrzelkova KJ, Jost Robinson CA, Yeoman CJ, Carbonero F, Pafco B, Rothman JM, Ulanov A, Vlckova K, Amato KR, Schnorr SL, Dominy NJ, Modry D, et al. Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints. Msphere. 4. PMID 31366708 DOI: 10.1128/mSphere.00271-19  1
2019 Amato KR. Missing Links: the Role of Primates in Understanding the Human Microbiome. Msystems. 4. PMID 31117024 DOI: 10.1128/mSystems.00165-19  0.01
2019 Hale VL, Tan CL, Niu K, Yang Y, Zhang Q, Knight R, Amato KR. Gut microbiota in wild and captive Guizhou snub-nosed monkeys, Rhinopithecus brelichi. American Journal of Primatology. e22989. PMID 31106872 DOI: 10.1002/Ajp.22989  1
2019 Amato KR, Maurice CF, Guillemin K, Giles-Vernick T. Multidisciplinarity in Microbiome Research: A Challenge and Opportunity to Rethink Causation, Variability, and Scale. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900007. PMID 31099415 DOI: 10.1002/Bies.201900007  0.01
2019 Dhakan DB, Maji A, Sharma AK, Saxena R, Pulikkan J, Grace T, Gomez A, Scaria J, Amato KR, Sharma VK. The unique composition of Indian gut microbiome, gene catalogue and associated faecal metabolome deciphered using multi-omics approaches. Gigascience. PMID 30698687 DOI: 10.1093/Gigascience/Giz004  1
2018 Amato KR, G Sanders J, Song SJ, Nute M, Metcalf JL, Thompson LR, Morton JT, Amir A, J McKenzie V, Humphrey G, Gogul G, Gaffney J, L Baden A, A O Britton G, P Cuozzo F, et al. Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes. The Isme Journal. PMID 29995839 DOI: 10.1038/S41396-018-0175-0  1
2018 Mallott EK, Amato KR. The microbial reproductive ecology of white-faced capuchins (Cebus capucinus). American Journal of Primatology. e22896. PMID 29984842 DOI: 10.1002/Ajp.22896  1
2018 Clayton JB, Gomez A, Amato K, Knights D, Travis DA, Blekhman R, Knight R, Leigh S, Stumpf R, Wolf T, Glander KE, Cabana F, Johnson TJ. The gut microbiome of nonhuman primates: Lessons in ecology and evolution. American Journal of Primatology. e22867. PMID 29862519 DOI: 10.1002/Ajp.22867  1
2018 Mallott EK, Amato KR, Garber PA, Malhi RS. Influence of fruit and invertebrate consumption on the gut microbiota of wild white-faced capuchins (Cebus capucinus). American Journal of Physical Anthropology. PMID 29313897 DOI: 10.1002/Ajpa.23395  1
2017 Davenport ER, Sanders JG, Song SJ, Amato KR, Clark AG, Knight R. The human microbiome in evolution. Bmc Biology. 15: 127. PMID 29282061 DOI: 10.1186/S12915-017-0454-7  1
2017 Raulo A, Ruokolainen L, Lane A, Amato K, Knight R, Leigh S, Stumpf R, White B, Nelson KE, Baden AL, Tecot SR. Social behaviour and gut microbiota in red-bellied lemurs (Eulemur rubriventer): In search of the role of immunity in the evolution of sociality. The Journal of Animal Ecology. PMID 29205327 DOI: 10.1111/1365-2656.12781  1
2017 McKenzie VJ, Song SJ, Delsuc F, Prest TL, Oliverio AM, Korpita TM, Alexiev A, Amato KR, Metcalf JL, Kowalewski M, Avenant NL, Link A, Di Fiore A, Seguin-Orlando A, Feh C, et al. The Effects of Captivity on the Mammalian Gut Microbiome. Integrative and Comparative Biology. PMID 28985326 DOI: 10.1093/Icb/Icx090  1
2017 Hale VL, Tan CL, Niu K, Yang Y, Knight R, Zhang Q, Cui D, Amato KR. Erratum to: Diet Versus Phylogeny: a Comparison of Gut Microbiota in Captive Colobine Monkey Species. Microbial Ecology. PMID 28894881 DOI: 10.1007/S00248-017-1070-3  1
2017 Springer A, Fichtel C, Al-Ghalith GA, Koch F, Amato KR, Clayton JB, Knights D, Kappeler PM. Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux's sifakas (Propithecus verreauxi). Ecology and Evolution. 7: 5732-5745. PMID 28808547 DOI: 10.1002/Ece3.3148  0.01
2017 Hale VL, Tan CL, Niu K, Yang Y, Knight R, Zhang Q, Cui D, Amato KR. Diet Versus Phylogeny: a Comparison of Gut Microbiota in Captive Colobine Monkey Species. Microbial Ecology. PMID 28735426 DOI: 10.1007/S00248-017-1041-8  1
2017 Amato KR, Van Belle S, Di Fiore A, Estrada A, Stumpf R, White B, Nelson KE, Knight R, Leigh SR. Patterns in Gut Microbiota Similarity Associated with Degree of Sociality among Sex Classes of a Neotropical Primate. Microbial Ecology. PMID 28124727 DOI: 10.1007/S00248-017-0938-6  1
2017 Estrada A, Garber PA, Rylands AB, Roos C, Fernandez-Duque E, Di Fiore A, Nekaris KA, Nijman V, Heymann EW, Lambert JE, Rovero F, Barelli C, Setchell JM, Gillespie TR, Mittermeier RA, ... ... Amato KR, et al. Impending extinction crisis of the world's primates: Why primates matter. Science Advances. 3: e1600946. PMID 28116351 DOI: 10.1126/Sciadv.1600946  1
2016 Amato KR, Ulanov A, Ju KS, Garber PA. Metabolomic data suggest regulation of black howler monkey (Alouatta pigra) diet composition at the molecular level. American Journal of Primatology. PMID 27936282 DOI: 10.1002/Ajp.22616  1
2016 Song SJ, Amir A, Metcalf JL, Amato KR, Xu ZZ, Humphrey G, Knight R. Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies. Msystems. 1. PMID 27822526 DOI: 10.1128/mSystems.00021-16  1
2016 Amato KR. An introduction to microbiome analysis for human biology applications. American Journal of Human Biology : the Official Journal of the Human Biology Council. PMID 27762069 DOI: 10.1002/Ajhb.22931  0.01
2016 Hale VL, Tan CL, Niu K, Yang Y, Cui D, Zhao H, Knight R, Amato KR. Effects of field conditions on fecal microbiota. Journal of Microbiological Methods. PMID 27686380 DOI: 10.1016/J.Mimet.2016.09.017  1
2016 Bennett G, Malone M, Sauther ML, Cuozzo FP, White B, Nelson KE, Stumpf RM, Knight R, Leigh SR, Amato KR. Host age, social group, and habitat type influence the gut microbiota of wild ring-tailed lemurs (Lemur catta). American Journal of Primatology. PMID 27177345 DOI: 10.1002/Ajp.22555  1
2016 Hastings AK, Amato KR, Wen SC, Peterson LS, Williams JV. Human metapneumovirus small hydrophobic (SH) protein downregulates type I IFN pathway signaling by affecting STAT1 expression and phosphorylation. Virology. 494: 248-256. PMID 27131212 DOI: 10.1016/J.Virol.2016.04.022  1
2016 Gomez A, Petrzelkova KJ, Burns MB, Yeoman CJ, Amato KR, Vlckova K, Modry D, Todd A, Jost Robinson CA, Remis MJ, Torralba MG, Morton E, Umaña JD, Carbonero F, Gaskins HR, et al. Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns. Cell Reports. PMID 26923597 DOI: 10.1016/J.Celrep.2016.02.013  1
2016 Amato KR. Incorporating the gut microbiota into models of human and non-human primate ecology and evolution. American Journal of Physical Anthropology. 159: S196-215. PMID 26808106 DOI: 10.1002/Ajpa.22908  0.01
2016 Amato KR, Wang S, Tan L, Hastings AK, Song W, Lovly CM, Meador CB, Ye F, Lu P, Balko JM, Colvin DC, Cates JM, Pao W, Gray NS, Chen J. EPHA2 Blockade Overcomes Acquired Resistance to EGFR Kinase Inhibitors in Lung Cancer. Cancer Research. PMID 26744526 DOI: 10.1158/0008-5472.Can-15-0717  1
2016 Amato KR, Metcalf JL, Song SJ, Hale VL, Clayton J, Ackermann G, Humphrey G, Niu K, Cui D, Zhao H, Schrenzel MD, Tan CL, Knight R, Braun J. Using the gut microbiota as a novel tool for examining colobine primate GI health Global Ecology and Conservation. 7: 225-237. DOI: 10.1016/J.Gecco.2016.06.004  1
2016 Stumpf RM, Gomez A, Amato KR, Yeoman CJ, Polk JD, Wilson BA, Nelson KE, White BA, Leigh SR. Microbiomes, metagenomics, and primate conservation: New strategies, tools, and applications Biological Conservation. 199: 56-66. DOI: 10.1016/J.Biocon.2016.03.035  1
2015 Amato KR, Martinez-Mota R, Righini N, Raguet-Schofield M, Corcione FP, Marini E, Humphrey G, Gogul G, Gaffney J, Lovelace E, Williams L, Luong A, Dominguez-Bello MG, Stumpf RM, White B, et al. Phylogenetic and ecological factors impact the gut microbiota of two Neotropical primate species. Oecologia. PMID 26597549 DOI: 10.1007/S00442-015-3507-Z  1
2015 Amato KR, Yeoman CJ, Cerda G, A Schmitt C, Cramer JD, Miller ME, Gomez A, R Turner T, Wilson BA, Stumpf RM, Nelson KE, White BA, Knight R, Leigh SR. Variable responses of human and non-human primate gut microbiomes to a Western diet. Microbiome. 3: 53. PMID 26568112 DOI: 10.1186/S40168-015-0120-7  1
2015 Hale VL, Tan CL, Knight R, Amato KR. Effect of preservation method on spider monkey (Ateles geoffroyi) fecal microbiota over 8 weeks. Journal of Microbiological Methods. 113: 16-26. PMID 25819008 DOI: 10.1016/J.Mimet.2015.03.021  1
2015 Wang S, Amato KR, Song W, Youngblood V, Lee K, Boothby M, Brantley-Sieders DM, Chen J. Regulation of endothelial cell proliferation and vascular assembly through distinct mTORC2 signaling pathways. Molecular and Cellular Biology. 35: 1299-313. PMID 25582201 DOI: 10.1128/MCB.00306-14  0.01
2015 Amato KR, Leigh SR, Kent A, Mackie RI, Yeoman CJ, Stumpf RM, Wilson BA, Nelson KE, White BA, Garber PA. The gut microbiota appears to compensate for seasonal diet variation in the wild black howler monkey (Alouatta pigra). Microbial Ecology. 69: 434-43. PMID 25524570 DOI: 10.1007/S00248-014-0554-7  1
2014 Amato KR, Leigh SR, Kent A, Mackie RI, Yeoman CJ, Stumpf RM, Wilson BA, Nelson KE, White BA, Garber PA. The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra). American Journal of Physical Anthropology. 155: 652-64. PMID 25252073 DOI: 10.1002/Ajpa.22621  1
2014 Amato KR, Garber PA. Nutrition and foraging strategies of the black howler monkey (Alouatta pigra) in Palenque National Park, Mexico. American Journal of Primatology. 76: 774-87. PMID 24763976 DOI: 10.1002/Ajp.22268  1
2014 Amato KR, Wang S, Hastings AK, Youngblood VM, Santapuram PR, Chen H, Cates JM, Colvin DC, Ye F, Brantley-Sieders DM, Cook RS, Tan L, Gray NS, Chen J. Genetic and pharmacologic inhibition of EPHA2 promotes apoptosis in NSCLC. The Journal of Clinical Investigation. 124: 2037-49. PMID 24713656 DOI: 10.1172/Jci72522  1
2013 Amato KR, Van Belle S, Wilkinson B. A comparison of scan and focal sampling for the description of wild primate activity, diet and intragroup spatial relationships. Folia Primatologica; International Journal of Primatology. 84: 87-101. PMID 23548732 DOI: 10.1159/000348305  1
2013 Amato KR, Yeoman CJ, Kent A, Righini N, Carbonero F, Estrada A, Gaskins HR, Stumpf RM, Yildirim S, Torralba M, Gillis M, Wilson BA, Nelson KE, White BA, Leigh SR. Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes. The Isme Journal. 7: 1344-53. PMID 23486247 DOI: 10.1038/Ismej.2013.16  1
2011 Chmielecki J, Foo J, Oxnard GR, Hutchinson K, Ohashi K, Somwar R, Wang L, Amato KR, Arcila M, Sos ML, Socci ND, Viale A, de Stanchina E, Ginsberg MS, Thomas RK, et al. Optimization of dosing for EGFR-mutant non-small cell lung cancer with evolutionary cancer modeling. Science Translational Medicine. 3: 90ra59. PMID 21734175 DOI: 10.1126/Scitranslmed.3002356  1
2011 Nakamura N, Amato KR, Garber P, Estrada A, Mackie RI, Gaskins HR. Analysis of the hydrogenotrophic microbiota of wild and captive black howler monkeys (Alouatta pigra) in palenque national park, Mexico. American Journal of Primatology. 73: 909-19. PMID 21557284 DOI: 10.1002/Ajp.20961  1
2008 Amato KR, Emel SL, Lindgren CA, Sullan KM, Wright PR, Gilbert JJ. Covering behavior of two co-occurring Jamaican sea urchins: Differences in the amount of covering and selection of covering material Bulletin of Marine Science. 82: 255-261.  1
1984 Amato KR, Sallan SE, Lipton JM. Combination chemotherapy in relapsed childhood acute lymphoblastic leukemia. Cancer Treatment Reports. 68: 411-2. PMID 6583001  0.01
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