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Nicholas K. Conrad, Ph.D. - Publications

Affiliations: 
2002 Johns Hopkins University, Baltimore, MD 
Area:
Molecular Biology
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Devlin AM, Shukla A, Ruiz JC, Barnes SD, Govindan A, Hunter OV, Scarborough AM, D'Orso I, Conrad NK. The PNUTS-PP1 complex acts as an intrinsic barrier to herpesvirus KSHV gene expression and replication. Nature Communications. 13: 7447. PMID 36460671 DOI: 10.1038/s41467-022-35268-4  0.526
2021 Scarborough AM, Flaherty JN, Hunter OV, Liu K, Kumar A, Xing C, Tu BP, Conrad NK. SAM homeostasis is regulated by CFI-mediated splicing of MAT2A. Elife. 10. PMID 33949310 DOI: 10.7554/eLife.64930  0.305
2020 Ruiz JC, Devlin A, Kim J, Conrad NK. Kaposi's sarcoma-associated herpesvirus fine-tunes the temporal expression of late genes by manipulating a host RNA quality control pathway. Journal of Virology. PMID 32376621 DOI: 10.1128/Jvi.00287-20  0.595
2020 Rosado-González GT, Devlin A, Conrad N. PNUTS and CDK12 enhance KSHV gene expression independently of RNA quality control pathways The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.02714  0.532
2019 Ruiz JC, Hunter OV, Conrad NK. Kaposi's sarcoma-associated herpesvirus ORF57 protein protects viral transcripts from specific nuclear RNA decay pathways by preventing hMTR4 recruitment. Plos Pathogens. 15: e1007596. PMID 30785952 DOI: 10.1371/Journal.Ppat.1007596  0.653
2018 Zhang L, Wang J, Muñoz-Moreno R, Kim M, Sakthivel R, Mo W, Shao D, Anantharaman A, García-Sastre A, Conrad NK, Fontoura BMA. Influenza Virus NS1 Protein RNA-Interactome Reveals Intron Targeting. Journal of Virology. PMID 30258002 DOI: 10.1128/Jvi.01634-18  0.574
2018 Doxtader KA, Wang P, Scarborough AM, Seo D, Conrad NK, Nam Y. Structural Basis for Regulation of METTL16, an S-Adenosylmethionine Homeostasis Factor. Molecular Cell. PMID 30197297 DOI: 10.1016/J.Molcel.2018.07.025  0.533
2018 Pendleton KE, Park SK, Hunter OV, Bresson SM, Conrad NK. Balance between MAT2A intron detention and splicing is determined co-transcriptionally. Rna (New York, N.Y.). PMID 29563249 DOI: 10.1261/Rna.064899.117  0.615
2017 Chorghade S, Seimetz J, Emmons R, Yang J, Bresson SM, Lisio M, Parise G, Conrad NK, Kalsotra A. Poly(A) tail length regulates PABPC1 expression to tune translation in the heart. Elife. 6. PMID 28653618 DOI: 10.7554/Elife.24139  0.361
2017 Pendleton KE, Chen B, Liu K, Hunter OV, Xie Y, Tu BP, Conrad NK. The U6 snRNA m(6)A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention. Cell. 169: 824-835.e14. PMID 28525753 DOI: 10.1016/J.Cell.2017.05.003  0.486
2017 Anantharaman A, Tripathi V, Khan A, Yoon JH, Singh DK, Gholamalamdari O, Guang S, Ohlson J, Wahlstedt H, Öhman M, Jantsch MF, Conrad NK, Ma J, Gorospe M, Prasanth SG, et al. ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins. Nucleic Acids Research. PMID 28053121 DOI: 10.1093/Nar/Gkw1304  0.656
2017 Chorghade S, Seimetz J, Emmons R, Yang J, Bresson SM, Lisio MD, Parise G, Conrad NK, Kalsotra A. Author response: Poly(A) tail length regulates PABPC1 expression to tune translation in the heart Elife. DOI: 10.7554/Elife.24139.022  0.309
2016 Conrad NK. New insights into the expression and functions of the Kaposi's sarcoma-associated herpesvirus long noncoding PAN RNA. Virus Research. 212: 53-63. PMID 26103097 DOI: 10.1016/J.Virusres.2015.06.012  0.673
2015 Bresson SM, Hunter OV, Hunter AC, Conrad NK. Canonical Poly(A) Polymerase Activity Promotes the Decay of a Wide Variety of Mammalian Nuclear RNAs. Plos Genetics. 11: e1005610. PMID 26484760 DOI: 10.1371/Journal.Pgen.1005610  0.62
2015 Sei E, Wang T, Hunter OV, Xie Y, Conrad NK. HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma-associated herpesvirus ORF57 protein and host pre-mRNA metabolism. Plos Pathogens. 11: e1004652. PMID 25710169 DOI: 10.1371/Journal.Ppat.1004652  0.632
2015 Stubbs SH, Conrad NK. Depletion of REF/Aly alters gene expression and reduces RNA polymerase II occupancy Nucleic Acids Research. 43: 504-519. PMID 25477387 DOI: 10.1093/Nar/Gku1278  0.658
2014 Stubbs SH, Conrad NK. Analysis of RNA-protein interactions by cell mixing Methods in Enzymology. 539: 67-80. PMID 24581439 DOI: 10.1016/B978-0-12-420120-0.00005-0  0.597
2014 Sei E, Conrad NK. UV cross-linking of interacting RNA and protein in cultured cells Methods in Enzymology. 539: 53-66. PMID 24581438 DOI: 10.1016/B978-0-12-420120-0.00004-9  0.614
2014 Conrad NK. The emerging role of triple helices in RNA biology Wiley Interdisciplinary Reviews: Rna. 5: 15-29. PMID 24115594 DOI: 10.1002/Wrna.1194  0.643
2013 Bresson SM, Conrad NK. The Human Nuclear Poly(A)-Binding Protein Promotes RNA Hyperadenylation and Decay Plos Genetics. 9. PMID 24146636 DOI: 10.1371/Journal.Pgen.1003893  0.674
2013 Hunter OV, Sei E, Blake Richardson R, Conrad NK. Chromatin Immunoprecipitation and Microarray Analysis Suggest Functional Cooperation between Kaposi's Sarcoma-Associated Herpesvirus ORF57 and K-bZIP Journal of Virology. 87: 4005-4016. PMID 23365430 DOI: 10.1128/Jvi.03459-12  0.49
2012 Grammel M, Hang H, Conrad NK. Chemical Reporters for Monitoring RNA Synthesis and Poly(A) Tail Dynamics Chembiochem. 13: 1112-1115. PMID 22513998 DOI: 10.1002/Cbic.201200091  0.63
2012 Stubbs SH, Hunter OV, Hoover A, Conrad NK. Viral factors reveal a role for REF/Aly in nuclear RNA stability Molecular and Cellular Biology. 32: 1260-1270. PMID 22290432 DOI: 10.1128/Mcb.06420-11  0.668
2011 Sei E, Conrad NK. Delineation of a core RNA element required for Kaposi's sarcoma-associated herpesvirus ORF57 binding and activity Virology. 419: 107-116. PMID 21889182 DOI: 10.1016/J.Virol.2011.08.006  0.633
2010 Sahin BB, Patel D, Conrad NK. Kaposi's sarcoma-associated herpesvirus ORF57 protein binds and protects a nuclear noncoding RNA from cellular RNA decay pathways. Plos Pathogens. 6: e1000799. PMID 20221435 DOI: 10.1371/Journal.Ppat.1000799  0.686
2009 Conrad NK. Chapter 6 Posttranscriptional Gene Regulation in Kaposi's Sarcoma-Associated Herpesvirus Advances in Applied Microbiology. 68: 241-261. PMID 19426857 DOI: 10.1016/S0065-2164(09)01206-4  0.488
2008 Conrad NK. Chapter 15 Co-Immunoprecipitation Techniques for Assessing RNA-Protein Interactions In Vivo Methods in Enzymology. 449: 317-342. PMID 19215765 DOI: 10.1016/S0076-6879(08)02415-4  0.658
2007 Conrad NK, Shu MD, Uyhazi KE, Steitz JA. Mutational analysis of a viral RNA element that counteracts rapid RNA decay by interaction with the polyadenylate tail. Proceedings of the National Academy of Sciences of the United States of America. 104: 10412-7. PMID 17563387 DOI: 10.1073/Pnas.0704187104  0.537
2006 Conrad NK, Fok V, Cazalla D, Borah S, Steitz JA. The challenge of viral snRNPs. Cold Spring Harbor Symposia On Quantitative Biology. 71: 377-84. PMID 17381320 DOI: 10.1101/Sqb.2006.71.057  0.608
2006 Conrad NK, Mili S, Marshall EL, Shu MD, Steitz JA. Identification of a rapid mammalian deadenylation-dependent decay pathway and its inhibition by a viral RNA element. Molecular Cell. 24: 943-53. PMID 17189195 DOI: 10.1016/J.Molcel.2006.10.029  0.629
2005 Conrad NK, Steitz JA. A Kaposi's sarcoma virus RNA element that increases the nuclear abundance of intronless transcripts. The Embo Journal. 24: 1831-41. PMID 15861127 DOI: 10.1038/Sj.Emboj.7600662  0.6
2001 Steinmetz EJ, Conrad NK, Brow DA, Corden JL. RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts Nature. 413: 327-331. PMID 11565036 DOI: 10.1038/35095090  0.742
2000 Conrad NK, Wilson SM, Steinmetz EJ, Patturajan M, Brow DA, Swanson MS, Corden JL. A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II. Genetics. 154: 557-71. PMID 10655211  0.714
2000 Conrad NK, Wilson SM, Steinmetz EJ, Brow DA, Swanson MS, Corden JL. A NRD1-NAB3 COMPLEX ASSOCIATED WITH YEAST RNA POLYMERASE II Biochemical Society Transactions. 28: A442-A442. DOI: 10.1042/Bst028A442B  0.694
1999 Patturajan M, Conrad NK, Bregman DB, Corden JL. Yeast carboxyl-terminal domain kinase I positively and negatively regulates RNA polymerase II carboxyl-terminal domain phosphorylation Journal of Biological Chemistry. 274: 27823-27828. PMID 10488128 DOI: 10.1074/Jbc.274.39.27823  0.611
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