Janet S. Sinsheimer - Publications

Affiliations: 
University of California, Los Angeles, Los Angeles, CA 
Area:
Mathematics, Biostatistics Biology

107 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chu BB, Ko S, Zhou JJ, Jensen A, Zhou H, Sinsheimer JS, Lange K. Multivariate Genome-wide Association Analysis by Iterative Hard Thresholding. Bioinformatics (Oxford, England). PMID 37067496 DOI: 10.1093/bioinformatics/btad193  0.491
2021 Stutz TC, Sinsheimer JS, Sehl M, Xu J. Computational tools for assessing gene therapy under branching process models of mutation. Bulletin of Mathematical Biology. 84: 15. PMID 34870755 DOI: 10.1007/s11538-021-00969-2  0.614
2021 Chu BB, Sobel EM, Wasiolek R, Ko S, Sinsheimer JS, Zhou H, Lange K. A fast Data-Driven method for genotype imputation, phasing, and local ancestry inference: MendelImpute.jl. Bioinformatics (Oxford, England). PMID 34289008 DOI: 10.1093/bioinformatics/btab489  0.479
2021 Chu BB, Sobel EM, Wasiolek R, Ko S, Sinsheimer JS, Zhou H, Lange K. A fast Data-Driven method for genotype imputation, phasing, and local ancestry inference: MendelImpute.jl. Bioinformatics (Oxford, England). PMID 34289008 DOI: 10.1093/bioinformatics/btab489  0.479
2021 Landeros A, Ji X, Lange K, Stutz TC, Xu J, Sehl ME, Sinsheimer JS. An examination of school reopening strategies during the SARS-CoV-2 pandemic. Plos One. 16: e0251242. PMID 34014947 DOI: 10.1371/journal.pone.0251242  0.717
2021 Ji SS, German CA, Lange K, Sinsheimer JS, Zhou H, Zhou J, Sobel EM. Modern simulation utilities for genetic analysis. Bmc Bioinformatics. 22: 228. PMID 33941078 DOI: 10.1186/s12859-021-04086-8  0.5
2021 Stutz TC, Landeros A, Xu J, Sinsheimer JS, Sehl M, Lange K. Stochastic simulation algorithms for Interacting Particle Systems. Plos One. 16: e0247046. PMID 33651796 DOI: 10.1371/journal.pone.0247046  0.685
2020 Landeros A, Ji X, Lange KL, Stutz TC, Xu J, Sehl ME, Sinsheimer JS. An Examination of School Reopening Strategies during the SARS-CoV-2 Pandemic. Medrxiv : the Preprint Server For Health Sciences. PMID 32793918 DOI: 10.1101/2020.08.05.20169086  0.714
2020 Chu BB, Keys KL, German CA, Zhou H, Zhou JJ, Sobel EM, Sinsheimer JS, Lange K. Iterative hard thresholding in genome-wide association studies: Generalized linear models, prior weights, and double sparsity. Gigascience. 9. PMID 32491161 DOI: 10.1093/Gigascience/Giaa044  0.578
2020 Levine AJ, Soontornniyomkij V, Masliah E, Sinsheimer JS, Ji SS, Horvath S, Singer EJ, Kallianpur A, Moore DJ. A candidate gene study of intermediate histopathological phenotypes in HIV-associated neurocognitive disorders. Journal of Neurovirology. PMID 32394397 DOI: 10.1007/S13365-020-00846-Z  0.328
2020 vonHoldt BM, DeCandia AL, Heppenheimer E, Janowitz-Koch I, Shi R, Zhou H, German CA, Brzeski KE, Cassidy KA, Stahler DR, Sinsheimer JS. Heritability of inter-pack aggression in a wild pedigreed population of North American gray wolves. Molecular Ecology. PMID 31905256 DOI: 10.1111/Mec.15349  0.352
2019 German CA, Sinsheimer JS, Klimentidis YC, Zhou H, Zhou JJ. Ordered multinomial regression for genetic association analysis of ordinal phenotypes at Biobank scale. Genetic Epidemiology. PMID 31879980 DOI: 10.1002/Gepi.22276  0.362
2019 Zhou H, Sinsheimer JS, Bates DM, Chu BB, German CA, Ji SS, Keys KL, Kim J, Ko S, Mosher GD, Papp JC, Sobel EM, Zhai J, Zhou JJ, Lange K. OPENMENDEL: a cooperative programming project for statistical genetics. Human Genetics. PMID 30915546 DOI: 10.1007/S00439-019-02001-Z  0.559
2018 Bolanos R, Martinez-Maza O, Zhang ZF, Hussain S, Sehl M, Sinsheimer JS, D'Souza G, Jenkins F, Wolinsky S, Detels R. Decreased levels of the serum inflammatory biomarkers, sGP130, IL-6, sCRP and BAFF, are associated with increased likelihood of AIDS related Kaposi's sarcoma in men who have sex with men. Cancer Research Frontiers. 4: 45-59. PMID 33521162 DOI: 10.17980/2018.45  0.585
2018 Landeros A, Stutz T, Keys KL, Alekseyenko A, Sinsheimer JS, Lange K, Sehl ME. BioSimulator.jl: Stochastic simulation in Julia. Computer Methods and Programs in Biomedicine. 167: 23-35. PMID 30501857 DOI: 10.1016/J.Cmpb.2018.09.009  0.701
2018 Lake JA, Larsen J, Tran DT, Sinsheimer JS. Uncovering the Genomic Origins of Life. Genome Biology and Evolution. PMID 29947758 DOI: 10.1093/Gbe/Evy129  0.546
2017 Lorenzo Bermejo J, Boekstegers F, González Silos R, Marcelain K, Baez Benavides P, Barahona Ponce C, Müller B, Ferreccio C, Koshiol J, Fischer C, Peil B, Sinsheimer J, Fuentes Guajardo M, Barajas O, Gonzalez-Jose R, et al. Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile. Plos Genetics. 13: e1006756. PMID 28542165 DOI: 10.1371/Journal.Pgen.1006756  0.301
2017 Cybis GB, Sinsheimer JS, Bedford T, Rambaut A, Lemey P, Suchard MA. Bayesian nonparametric clustering in phylogenetics: modeling antigenic evolution in influenza. Statistics in Medicine. PMID 28098392 DOI: 10.1002/Sim.7196  0.61
2016 Fejzo MS, Myhre R, Colodro-Conde L, Macgibbon K, Sinsheimer JS, Reddy MV, Pajukanta P, Nyholt DR, Wright MJ, Martin NG, Engel SM, Medland SE, Magnus P, Mullin PM. Hyperemesis gravidarum associated with RYR2 genetic analysis of hyperemesis gravidarum reveals association with intracellular calcium release channel (RYR2). Molecular and Cellular Endocrinology. PMID 27663074 DOI: 10.1016/J.Mce.2016.09.017  0.323
2016 Janowitz Koch I, Clark MM, Thompson MJ, Deere-Machemer KA, Wang J, Duarte L, Gnanadesikan GE, McCoy EL, Rubbi L, Stahler DR, Pellegrini M, Ostrander EA, Wayne RK, Sinsheimer JS, vonHoldt BM. The concerted impact of domestication and transposon insertions on methylation patterns between dogs and grey wolves. Molecular Ecology. 25: 1838-55. PMID 27112634 DOI: 10.1111/Mec.13480  0.303
2016 Lake JA, Larsen J, Sarna B, de la Haba RR, Pu Y, Koo H, Zhao J, Sinsheimer JS. Rings Reconcile Genotypic and Phenotypic Evolution within the Proteobacteria. Genome Biology and Evolution. 8: 578. PMID 26966240 DOI: 10.1093/gbe/evw030  0.502
2015 Cybis GB, Sinsheimer JS, Bedford T, Mather AE, Lemey P, Suchard MA. ASSESSING PHENOTYPIC CORRELATION THROUGH THE MULTIVARIATE PHYLOGENETIC LATENT LIABILITY MODEL. The Annals of Applied Statistics. 9: 969-991. PMID 27053974 DOI: 10.1214/15-Aoas821  0.655
2015 Lake JA, Larsen J, Sarna B, de la Haba RR, Pu Y, Koo H, Zhao J, Sinsheimer JS. Rings Reconcile Genotypic and Phenotypic Evolution within the Proteobacteria. Genome Biology and Evolution. PMID 26659922 DOI: 10.1093/Gbe/Evv221  0.596
2015 Clark MM, Blangero J, Dyer TD, Sobel EM, Sinsheimer JS. The Quantitative-MFG Test: A Linear Mixed Effect Model to Detect Maternal-Offspring Gene Interactions. Annals of Human Genetics. PMID 26567478 DOI: 10.1111/Ahg.12137  0.407
2015 Huertas-Vazquez A, Nelson CP, Sinsheimer JS, Reinier K, Uy-Evanado A, Teodorescu C, Ayala J, Hall AS, Gunson K, Jui J, Samani NJ, Chugh SS. Cumulative effects of common genetic variants on risk of sudden cardiac death. Ijc Heart & Vasculature. 7: 88-91. PMID 26114160 DOI: 10.1016/J.Ijcha.2015.03.001  0.314
2015 Gilbert PS, Chang J, Pan C, Sobel EM, Sinsheimer JS, Faircloth BC, Alfaro ME. Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes. Molecular Phylogenetics and Evolution. 92: 140-146. PMID 26079130 DOI: 10.1016/J.Ympev.2015.05.027  0.307
2015 Rickabaugh TM, Baxter RM, Sehl M, Sinsheimer JS, Hultin PM, Hultin LE, Quach A, Martínez-Maza O, Horvath S, Vilain E, Jamieson BD. Acceleration of age-associated methylation patterns in HIV-1-infected adults. Plos One. 10: e0119201. PMID 25807146 DOI: 10.1371/Journal.Pone.0119201  0.631
2015 Han E, Sinsheimer JS, Novembre J. Fast and accurate site frequency spectrum estimation from low coverage sequence data. Bioinformatics (Oxford, England). 31: 720-7. PMID 25359894 DOI: 10.1093/Bioinformatics/Btu725  0.322
2014 Palmer CG, Boudreault P, Baldwin EE, Sinsheimer JS. Impact of genetic counseling and Connexin-26 and Connexin-30 testing on deaf identity and comprehension of genetic test results in a sample of deaf adults: a prospective, longitudinal study. Plos One. 9: e111512. PMID 25375116 DOI: 10.1371/Journal.Pone.0111512  0.307
2014 Lange K, Papp JC, Sinsheimer JS, Sobel EM. Next Generation Statistical Genetics: Modeling, Penalization, and Optimization in High-Dimensional Data. Annual Review of Statistics and Its Application. 1: 279-300. PMID 24955378 DOI: 10.1146/annurev-statistics-022513-115638  0.542
2014 Han E, Sinsheimer JS, Novembre J. Characterizing bias in population genetic inferences from low-coverage sequencing data Molecular Biology and Evolution. 31: 723-735. PMID 24288159 DOI: 10.1093/Molbev/Mst229  0.358
2013 Lake JA, Sinsheimer JS. The deep roots of the rings of life. Genome Biology and Evolution. 5: 2440-8. PMID 24281049 DOI: 10.1093/Gbe/Evt194  0.556
2013 Lange K, Papp JC, Sinsheimer JS, Sripracha R, Zhou H, Sobel EM. Mendel: the Swiss army knife of genetic analysis programs. Bioinformatics (Oxford, England). 29: 1568-70. PMID 23610370 DOI: 10.1093/Bioinformatics/Btt187  0.567
2013 Cybis GB, Sinsheimer JS, Lemey P, Suchard MA. Graph hierarchies for phylogeography. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20120206. PMID 23382428 DOI: 10.1098/Rstb.2012.0206  0.626
2012 Riley L, Zhou H, Lange K, Sinsheimer JS, Sehl ME. Determining duration of HER2-targeted therapy using stem cell extinction models. Plos One. 7: e46613. PMID 23284608 DOI: 10.1371/Journal.Pone.0046613  0.693
2012 Anastasopoulos E, Kakoulidou A, Coleman AL, Sinsheimer JS, Wilson MR, Yu F, Salonikiou A, Koskosas A, Pappas T, Founti P, Lambropoulos A, Topouzis F. Association of sequence variation in the CX3CR1 gene with geographic atrophy age-related macular degeneration in a Greek population. Current Eye Research. 37: 1148-55. PMID 22816662 DOI: 10.3109/02713683.2012.705413  0.301
2012 Sinsheimer JS, Little RJ, Lake JA. Rooting gene trees without outgroups: EP rooting. Genome Biology and Evolution. 4: 709-19. PMID 22593551 DOI: 10.1093/Gbe/Evs047  0.696
2012 Tom JA, Sinsheimer JS, Suchard MA. Does history repeat itself? Wavelets and the phylodynamics of influenza A. Molecular Biology and Evolution. 29: 1367-77. PMID 22160768 DOI: 10.1093/Molbev/Msr305  0.785
2012 Zhou JJ, Ghazalpour A, Sobel EM, Sinsheimer JS, Lange K. Quantitative trait Loci association mapping by imputation of strain origins in multifounder crosses. Genetics. 190: 459-73. PMID 22143921 DOI: 10.1534/Genetics.111.135095  0.547
2012 Hussain SK, Sehl M, Conn D, Sinsheimer JS, Dandekar U, Papp J, Zhang Z, Ganz PA. Abstract A107: Variation in the prolactin and prolactin receptor genes and familial breast cancer Cancer Prevention Research. 5: A107-A107. DOI: 10.1158/1940-6207.Prev-12-A107  0.647
2011 Childs EJ, Sobel EM, Palmer CG, Sinsheimer JS. Detection of intergenerational genetic effects with application to HLA-B matching as a risk factor for schizophrenia. Human Heredity. 72: 161-72. PMID 22004985 DOI: 10.1159/000332051  0.756
2011 Sehl M, Zhou H, Sinsheimer JS, Lange KL. Extinction models for cancer stem cell therapy. Mathematical Biosciences. 234: 132-46. PMID 22001354 DOI: 10.1016/J.Mbs.2011.09.005  0.7
2011 Bocklandt S, Lin W, Sehl ME, Sánchez FJ, Sinsheimer JS, Horvath S, Vilain E. Epigenetic predictor of age. Plos One. 6: e14821. PMID 21731603 DOI: 10.1371/Journal.Pone.0014821  0.629
2011 Zhou JJ, Pelka S, Lange K, Palmer CG, Sinsheimer JS. Dissecting prenatal, postnatal, and inherited effects: ART and design. Genetic Epidemiology. 35: 437-46. PMID 21638309 DOI: 10.1002/Gepi.20591  0.569
2011 Zhou H, Alexander DH, Sehl ME, Sinsheimer JS, Sobel EM, Lange K. Penalized regression for genome-wide association screening of sequence data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 106-17. PMID 21121038  0.662
2011 Rhodes SL, Sinsheimer JS, Bordelon Y, Bronstein JM, Ritz B. Replication of GWAS associations for GAK and MAPT in Parkinson's disease. Annals of Human Genetics. 75: 195-200. PMID 21058943 DOI: 10.1111/J.1469-1809.2010.00616.X  0.309
2010 Tom JA, Sinsheimer JS, Suchard MA. Reuse, Recycle, Reweigh: Combating Influenza through Efficient Sequential Bayesian Computation for Massive Data. The Annals of Applied Statistics. 4: 1722-1748. PMID 26681992 DOI: 10.1214/10-Aoas349  0.776
2010 Sinsheimer JS, Elston RC, Fu WJ. Gene-gene interaction in maternal and perinatal research. Journal of Biomedicine & Biotechnology. 2010. PMID 20798776 DOI: 10.1155/2010/853612  0.349
2010 Zhou H, Sehl ME, Sinsheimer JS, Lange K. Association screening of common and rare genetic variants by penalized regression. Bioinformatics (Oxford, England). 26: 2375-82. PMID 20693321 DOI: 10.1093/Bioinformatics/Btq448  0.723
2010 Childs EJ, Palmer CG, Lange K, Sinsheimer JS. Modeling maternal-offspring gene-gene interactions: the extended-MFG test. Genetic Epidemiology. 34: 512-21. PMID 20552637 DOI: 10.1002/Gepi.20508  0.793
2010 Cantor RM, Lange K, Sinsheimer JS. Prioritizing GWAS results: A review of statistical methods and recommendations for their application. American Journal of Human Genetics. 86: 6-22. PMID 20074509 DOI: 10.1016/J.Ajhg.2009.11.017  0.582
2010 Riley LA, Zhou H, Lange K, Sinsheimer JS, Sehl ME. Abstract 104: Breast cancer stem cell extinction models: Implications for HER2 targeted therapy Cancer Research. 70: 104-104. DOI: 10.1158/1538-7445.Am10-104  0.699
2009 Sehl ME, Sinsheimer JS, Zhou H, Lange KL. Differential destruction of stem cells: implications for targeted cancer stem cell therapy. Cancer Research. 69: 9481-9. PMID 19996291 DOI: 10.1158/0008-5472.Can-09-2070  0.697
2009 Bonneaud C, Sinsheimer JS, Richard M, Chastel O, Sorci G. Mhc polymorphisms fail to explain the heritability of phytohaemagglutinin-induced skin swelling in a wild passerine. Biology Letters. 5: 784-7. PMID 19671600 DOI: 10.1098/Rsbl.2009.0435  0.321
2009 Crandall CJ, Sehl ME, Crawford SL, Gold EB, Habel LA, Butler LM, Sowers MR, Greendale GA, Sinsheimer JS. Sex steroid metabolism polymorphisms and mammographic density in pre- and early perimenopausal women. Breast Cancer Research : Bcr. 11: R51. PMID 19630952 DOI: 10.1186/Bcr2340  0.63
2009 Sinsheimer J. Statistical genetic approaches for mapping ophthalmic trait and disease genes. American Journal of Ophthalmology. 148: 183-5. PMID 19619719 DOI: 10.1016/J.Ajo.2009.02.004  0.399
2009 Zhou JJ, Lange K, Papp JC, Sinsheimer JS. A heterozygote-homozygote test of Hardy-Weinberg equilibrium. European Journal of Human Genetics : Ejhg. 17: 1495-500. PMID 19367317 DOI: 10.1038/Ejhg.2009.57  0.583
2009 Sehl ME, Langer LR, Papp JC, Kwan L, Seldon JL, Arellano G, Reiss J, Reed EF, Dandekar S, Korin Y, Sinsheimer JS, Zhang ZF, Ganz PA. Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 15: 2192-203. PMID 19276285 DOI: 10.1158/1078-0432.Ccr-08-1417  0.633
2008 Bauman LE, Sinsheimer JS, Sobel EM, Lange K. Mixed effects models for quantitative trait loci mapping with inbred strains. Genetics. 180: 1743-61. PMID 18791243 DOI: 10.1534/Genetics.108.091058  0.555
2008 Palmer CG, Mallery E, Turunen JA, Hsieh HJ, Peltonen L, Lonnqvist J, Woodward JA, Sinsheimer JS. Effect of Rhesus D incompatibility on schizophrenia depends on offspring sex. Schizophrenia Research. 104: 135-45. PMID 18692992 DOI: 10.1016/J.Schres.2008.06.022  0.59
2008 Sinsheimer JS, Plaisier CL, Huertas-Vazquez A, Aguilar-Salinas C, Tusie-Luna T, Pajukanta P, Lange K. Estimating ethnic admixture from pedigree data. American Journal of Human Genetics. 82: 748-55. PMID 18319077 DOI: 10.1016/J.Ajhg.2007.12.014  0.549
2008 Suchard MA, Lange K, Sinsheimer JS. Efficiency of Protein Production from mRNA Journal of Statistical Theory and Practice. 2: 173-182. DOI: 10.1080/15598608.2008.10411869  0.674
2007 Hsieh HJ, Palmer CG, Harney S, Chen HW, Bauman L, Brown MA, Sinsheimer JS. Using the maternal-fetal genotype incompatibility test to assess non-inherited maternal HLA-DRB1 antigen coding alleles as rheumatoid arthritis risk factors. Bmc Proceedings. 1: S124. PMID 18466466 DOI: 10.1186/1753-6561-1-S1-S124  0.584
2007 Snelling S, Sinsheimer JS, Carr A, Loughlin J. Genetic association analysis of LRCH1 as an osteoarthritis susceptibility locus. Rheumatology (Oxford, England). 46: 250-2. PMID 16891653 DOI: 10.1093/Rheumatology/Kel265  0.309
2006 Hsieh HJ, Palmer CG, Sinsheimer JS. Allowing for missing data at highly polymorphic genes when testing for maternal, offspring and maternal-fetal genotype incompatibility effects. Human Heredity. 62: 165-74. PMID 17065817 DOI: 10.1159/000096444  0.644
2006 Palmer CG, Hsieh HJ, Reed EF, Lonnqvist J, Peltonen L, Woodward JA, Sinsheimer JS. HLA-B maternal-fetal genotype matching increases risk of schizophrenia. American Journal of Human Genetics. 79: 710-5. PMID 16960807 DOI: 10.1086/507829  0.598
2006 Minassian SL, Palmer CG, Turunen JA, Paunio T, Lönnqvist J, Peltonen L, Woodward JA, Sinsheimer JS. Incorporating serotypes into family based association studies using the MFG test. Annals of Human Genetics. 70: 541-53. PMID 16759185 DOI: 10.1111/J.1469-1809.2005.00243.X  0.778
2006 Hsieh HJ, Palmer CG, Harney S, Newton JL, Wordsworth P, Brown MA, Sinsheimer JS. The v-MFG test: investigating maternal, offspring and maternal-fetal genetic incompatibility effects on disease and viability. Genetic Epidemiology. 30: 333-47. PMID 16607625 DOI: 10.1002/Gepi.20148  0.638
2005 Bauman LE, Almasy L, Blangero J, Duggirala R, Sinsheimer JS, Lange K. Fishing for pleiotropic QTLs in a polygenic sea. Annals of Human Genetics. 69: 590-611. PMID 16138917 DOI: 10.1111/J.1529-8817.2005.00181.X  0.575
2005 Suchard MA, Weiss RE, Sinsheimer JS. Models for estimating bayes factors with applications to phylogeny and tests of monophyly. Biometrics. 61: 665-73. PMID 16135017 DOI: 10.1111/J.1541-0420.2005.00352.X  0.691
2005 Lange K, Sinsheimer JS, Sobel E. Association testing with Mendel. Genetic Epidemiology. 29: 36-50. PMID 15834862 DOI: 10.1002/Gepi.20073  0.569
2005 McKenzie CA, Sinsheimer JS, Adeyemo AA, Cox RD, Southam L, Hugill A, Bouzekri N, Lathrop M, Forrester TE, Cooper RS, Ward R. SNP haplotypes in the angiotensin I-converting enzyme (ACE) gene: analysis of Nigerian family data using gamete competition models. Annals of Human Genetics. 69: 227-32. PMID 15720304 DOI: 10.1046/J.1529-8817.2004.00142.X  0.336
2005 Kraft P, Hsieh HJ, Cordell HJ, Sinsheimer J. A conditional-on-exchangeable-parental-genotypes likelihood that remains unbiased at the causal locus under multiple-affected-sibling ascertainment. Genetic Epidemiology. 29: 87-90. PMID 15712221 DOI: 10.1002/Gepi.20069  0.593
2005 Minassian SL, Palmer CG, Sinsheimer JS. An exact maternal-fetal genotype incompatibility (MFG) test. Genetic Epidemiology. 28: 83-95. PMID 15368616 DOI: 10.1002/Gepi.20027  0.763
2004 Lange K, Sinsheimer JS. The pedigree trimming problem. Human Heredity. 58: 108-11. PMID 15711090 DOI: 10.1159/000083031  0.505
2004 Kraft P, Palmer CG, Woodward AJ, Turunen JA, Minassian S, Paunio T, Lönnqvist J, Peltonen L, Sinsheimer JS. RHD maternal-fetal genotype incompatibility and schizophrenia: extending the MFG test to include multiple siblings and birth order. European Journal of Human Genetics : Ejhg. 12: 192-8. PMID 14735156 DOI: 10.1038/Sj.Ejhg.5201129  0.761
2004 Dorman KS, Sinsheimer JS, Lange K. In the garden of branching processes Siam Review. 46: 202-229. DOI: 10.1137/S0036144502417843  0.687
2004 Cantor RM, Lange K, Sinsheimer JS. Biostatistical Genetics and Genetic Epidemiology, Edited by Robert Elston, Jane Olson, and Lyle Palmer. Hoboken, NJ: John Wiley & Sons, Inc., 2002, 831 pages, U.S.$415.00 Genetic Epidemiology. 27: 84-86. DOI: 10.1002/Gepi.10324  0.526
2003 Sinsheimer JS, Suchard MA, Dorman KS, Fang F, Weiss RE. Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains. Applied Bioinformatics. 2: 131-44. PMID 15130798  0.747
2003 Suchard MA, Kitchen CM, Sinsheimer JS, Weiss RE. Hierarchical phylogenetic models for analyzing multipartite sequence data. Systematic Biology. 52: 649-64. PMID 14530132 DOI: 10.1080/10635150390238879  0.714
2003 Suchard MA, Weiss RE, Sinsheimer JS. Testing a molecular clock without an outgroup: derivations of induced priors on branch-length restrictions in a Bayesian framework. Systematic Biology. 52: 48-54. PMID 12554439 DOI: 10.1080/10635150390132713  0.709
2003 Sinsheimer JS, Palmer CG, Woodward JA. Detecting genotype combinations that increase risk for disease: maternal-fetal genotype incompatibility test. Genetic Epidemiology. 24: 1-13. PMID 12508251 DOI: 10.1002/Gepi.10211  0.364
2003 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Inferring spatial phylogenetic variation along nucleotide sequences: A multiple changepoint model Journal of the American Statistical Association. 98: 427-437. DOI: 10.1198/016214503000215  0.769
2003 Suchard MA, Weiss RE, Sinsheimer JS, Dorman KS, Patel M, McCabe ERB. Evolutionary Similarity Among Genes Journal of the American Statistical Association. 98: 653-662. DOI: 10.1198/016214503000000558  0.757
2002 Palmer CG, Turunen JA, Sinsheimer JS, Minassian S, Paunio T, Lönnqvist J, Peltonen L, Woodward JA. RHD maternal-fetal genotype incompatibility increases schizophrenia susceptibility. American Journal of Human Genetics. 71: 1312-9. PMID 12439825 DOI: 10.1086/344659  0.762
2002 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage. Systematic Biology. 51: 715-28. PMID 12396586 DOI: 10.1080/10635150290102384  0.764
2002 Schadt EE, Sinsheimer JS, Lange K. Applications of codon and rate variation models in molecular phylogeny. Molecular Biology and Evolution. 19: 1550-62. PMID 12200482 DOI: 10.1093/Oxfordjournals.Molbev.A004217  0.565
2002 Dorman KS, Kaplan AH, Sinsheimer JS. Bootstrap confidence levels for HIV-1 recombination. Journal of Molecular Evolution. 54: 200-9. PMID 11821913 DOI: 10.1007/S00239-001-0002-4  0.593
2001 Sinsheimer JS, Mckenzie CA, Keavney B, Lange K. SNPs and snails and puppy dogs' tail: Analysis of SNP haplotype data using the gamete competition model Annals of Human Genetics. 65: 483-490. PMID 11806856 DOI: 10.1017/S0003480001008843  0.565
2001 Suchard MA, Bailey JN, Elashoff DA, Sinsheimer JS. SNPing away at candidate genes Genetic Epidemiology. 21: S643-S648. PMID 11793754 DOI: 10.1002/Gepi.2001.21.S1.S643  0.649
2001 Suchard MA, Weiss RE, Sinsheimer JS. Bayesian selection of continuous-time Markov chain evolutionary models. Molecular Biology and Evolution. 18: 1001-13. PMID 11371589 DOI: 10.1093/Oxfordjournals.Molbev.A003872  0.702
2001 Patel M, Dorman KS, Zhang YH, Huang BL, Arnold AP, Sinsheimer JS, Vilain E, McCabe ER. Primate DAX1, SRY, and SOX9: evolutionary stratification of sex-determination pathway. American Journal of Human Genetics. 68: 275-80. PMID 11112659 DOI: 10.1086/316932  0.587
2000 Dorman KS, Kaplan AH, Lange K, Sinsheimer JS. Mutation takes no vacation: Can structured treatment interruptions increase the risk of drug-resistant HIV-1? Journal of Acquired Immune Deficiency Syndromes. 25: 398-402. PMID 11141239 DOI: 10.1097/00042560-200012150-00003  0.663
2000 Chitnavis J, Sinsheimer JS, Suchard MA, Clipsham K, Carr AJ. End-stage coxarthrosis and gonarthrosis. Aetiology, clinical patterns and radiological features of idiopathic osteoarthritis Rheumatology. 39: 612-619. PMID 10888705 DOI: 10.1093/Rheumatology/39.6.612  0.581
2000 Mustafa Z, Chapman K, Irven C, Carr AJ, Clipsham K, Chitnavis J, Sinsheimer JS, Bloomfield VA, McCartney M, Cox O, Sykes B, Loughlin J. Linkage analysis of candidate genes as susceptibility loci for osteoarthritis-suggestive linkage of COL9A1 to female hip osteoarthritis. Rheumatology (Oxford, England). 39: 299-306. PMID 10788539 DOI: 10.1093/Rheumatology/39.3.299  0.302
2000 Sinsheimer JS, Blangero J, Lange K. Gamete-competition models American Journal of Human Genetics. 66: 1168-1172. PMID 10712230 DOI: 10.1086/302826  0.581
1999 Pérez C C, Vial C P, Dorman KS, Wang G, Abarca V K, Sinsheimer JS, Kaplan AH. Molecular epidemiology of the human immunodeficiency virus tipe 1 in Santiago, Chile | Epidemiología molecular del virus de inmunodeficiencia humana tipo 1 en Santiago, Chile Revista Medica De Chile. 127: 1294-1304. PMID 10835715  0.525
1999 Suchard MA, Yudkin P, Sinsheimer JS, Fowler GH. General practitioners' views on genetic screening for common diseases British Journal of General Practice. 49: 45-46. PMID 10622017  0.576
1999 Bailey JN, Suchard MA, Smalley SL, Sinsheimer JS. Search for a gene x environment interaction: G x E hunt Genetic Epidemiology. 17: S491-S496. PMID 10597481 DOI: 10.1002/Gepi.1370170779  0.6
1999 Pérez C C, Vial C P, Dorman KS, Wang G, Wang G, Abarca V K, Sinsheimer JS, Kaplan AH. Epidemiología molecular del virus de inmunodeficiencia humana tipo 1 en Santiago, Chile Revista MéDica De Chile. 127. DOI: 10.4067/S0034-98871999001100002  0.595
1999 Suchard MA, Yudkin P, Sinsheimer JS. Are general practitioners willing and able to provide genetic services for common diseases? Journal of Genetic Counseling. 8: 301-311. DOI: 10.1023/A:1022934316284  0.606
1998 Schadt EE, Sinsheimer JS, Lange K. Computational advances in maximum likelihood methods for molecular phylogeny Genome Research. 8: 222-233. PMID 9521926 DOI: 10.1101/Gr.8.3.222  0.568
1997 Sinsheimer JS, Lake JA, Little RJA. Inference for phylogenies under a hybrid parsimony method: Evolutionary- symmetric transversion parsimony Biometrics. 53: 23-38. PMID 9147592 DOI: 10.2307/2533094  0.58
1996 Sinsheimer JS, Lake JA, Little RJA. Bayesian hypothesis testing of four-taxon topologies using molecular sequence data Biometrics. 52: 193-210. PMID 8934592 DOI: 10.2307/2533156  0.6
1996 Lech WJ, Wang G, Yang YL, Chee Y, Dorman K, Mccrae D, Lazzeroni LC, Erickson JW, Sinsheimer JS, Kaplan AH. In vivo sequence diversity of the protease of human immunodeficiency virus type 1: Presence of protease inhibitor-resistant variants in untreated subjects Journal of Virology. 70: 2038-2043. PMID 8627733 DOI: 10.1128/Jvi.70.3.2038-2043.1996  0.571
1993 Lange K, Sinsheimer JS. Normal/independent distributions and their applications in robust regression Journal of Computational and Graphical Statistics. 2: 175-198. DOI: 10.1080/10618600.1993.10474606  0.531
1992 Lange K, Sinsheimer JS. Calculation of genetic identity coefficients Annals of Human Genetics. 56: 339-346. PMID 1492748 DOI: 10.1111/J.1469-1809.1992.Tb01162.X  0.536
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