Yun Zhang - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 

47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Lee HJ, Liang J, Chaudhary S, Moon S, Yu Z, Wu T, Liu H, Choi MK, Zhang Y, Lu H. Automated cell annotation in multi-cell images using an improved CRF_ID algorithm. Biorxiv : the Preprint Server For Biology. PMID 37333322 DOI: 10.1101/2023.06.07.543949  0.645
2023 Wu T, Ge M, Wu M, Duan F, Liang J, Chen M, Gracida X, Liu H, Yang W, Dar AR, Li C, Butcher RA, Saltzman AL, Zhang Y. Pathogenic bacteria modulate pheromone response to promote mating. Nature. 613: 324-331. PMID 36599989 DOI: 10.1038/s41586-022-05561-9  0.671
2022 Lambert AW, Fiore C, Chutake Y, Verhaar ER, Strasser PC, Chen MW, Farouq D, Das S, Li X, Eaton EN, Zhang Y, Liu Donaher J, Engstrom I, Reinhardt F, Yuan B, et al. ΔNp63/p73 drive metastatic colonization by controlling a regenerative epithelial stem cell program in quasi-mesenchymal cancer stem cells. Developmental Cell. 57: 2714-2730.e8. PMID 36538894 DOI: 10.1016/j.devcel.2022.11.015  0.378
2022 Zhang Y, Donaher JL, Das S, Li X, Reinhardt F, Krall JA, Lambert AW, Thiru P, Keys HR, Khan M, Hofree M, Wilson MM, Yedier-Bayram O, Lack NA, Onder TT, et al. Genome-wide CRISPR screen identifies PRC2 and KMT2D-COMPASS as regulators of distinct EMT trajectories that contribute differentially to metastasis. Nature Cell Biology. PMID 35411083 DOI: 10.1038/s41556-022-00877-0  0.385
2022 Liu H, Wu T, Canales XG, Wu M, Choi MK, Duan F, Calarco JA, Zhang Y. Forgetting generates a novel state that is reactivatable. Science Advances. 8: eabi9071. PMID 35148188 DOI: 10.1126/sciadv.abi9071  0.651
2022 Yang W, Wu T, Tu S, Qin Y, Shen C, Li J, Choi MK, Duan F, Zhang Y. Redundant neural circuits regulate olfactory integration. Plos Genetics. 18: e1010029. PMID 35100258 DOI: 10.1371/journal.pgen.1010029  0.62
2021 Wasson JA, Harris G, Keppler-Ross S, Brock TJ, Dar AR, Butcher RA, Fischer SEJ, Kagias K, Clardy J, Zhang Y, Mango SE. Neuronal control of maternal provisioning in response to social cues. Science Advances. 7. PMID 34417172 DOI: 10.1126/sciadv.abf8782  0.756
2021 Morud J, Hardege I, Liu H, Wu T, Choi MK, Basu S, Zhang Y, Schafer WR. Deorphanization of novel biogenic amine-gated ion channels identifies a new serotonin receptor for learning. Current Biology : Cb. PMID 34388373 DOI: 10.1016/j.cub.2021.07.036  0.635
2020 Liu H, Zhang Y. What can a worm learn in a bacteria-rich habitat? Journal of Neurogenetics. 1-9. PMID 33054485 DOI: 10.1080/01677063.2020.1829614  0.435
2020 Pereira AG, Gracida X, Kagias K, Zhang Y. aversive olfactory learning generates diverse intergenerational effects. Journal of Neurogenetics. 1-11. PMID 32940103 DOI: 10.1080/01677063.2020.1819265  0.751
2020 Choi MK, Liu H, Wu T, Yang W, Zhang Y. NMDAR-mediated modulation of gap junction circuit regulates olfactory learning in C. elegans. Nature Communications. 11: 3467. PMID 32651378 DOI: 10.1038/S41467-020-17218-0  0.675
2019 Wu T, Duan F, Yang W, Liu H, Caballero A, Fernandes de Abreu DA, Dar AR, Alcedo J, Ch'ng Q, Butcher RA, Zhang Y. Pheromones Modulate Learning by Regulating the Balanced Signals of Two Insulin-like Peptides. Neuron. PMID 31676170 DOI: 10.1016/J.Neuron.2019.09.006  0.683
2019 Rashidian M, LaFleur MW, Verschoor VL, Dongre A, Zhang Y, Nguyen TH, Kolifrath S, Aref AR, Lau CJ, Paweletz CP, Bu X, Freeman GJ, Barrasa MI, Weinberg RA, Sharpe AH, et al. Immuno-PET identifies the myeloid compartment as a key contributor to the outcome of the antitumor response under PD-1 blockade. Proceedings of the National Academy of Sciences of the United States of America. PMID 31375632 DOI: 10.1073/Pnas.1905005116  0.35
2019 Harris G, Wu T, Linfield G, Choi MK, Liu H, Zhang Y. Molecular and cellular modulators for multisensory integration in C. elegans. Plos Genetics. 15: e1007706. PMID 30849079 DOI: 10.1371/Journal.Pgen.1007706  0.742
2019 Donato A, Kagias K, Zhang Y, Hilliard MA. Neuronal sub-compartmentalization: a strategy to optimize neuronal function. Biological Reviews of the Cambridge Philosophical Society. PMID 30609235 DOI: 10.1111/Brv.12487  0.74
2018 Zhang Y, Weinberg RA. Epithelial-to-mesenchymal transition in cancer: complexity and opportunities. Frontiers of Medicine. PMID 30043221 DOI: 10.1007/S11684-018-0656-6  0.392
2018 Hao Y, Yang W, Ren J, Hall Q, Zhang Y, Kaplan JM. Thioredoxin shapes the sensory response to produced nitric oxide. Elife. 7. PMID 30014846 DOI: 10.7554/Elife.36833  0.321
2017 Liu H, Yang W, Wu T, Duan F, Soucy E, Jin X, Zhang Y. Cholinergic Sensorimotor Integration Regulates Olfactory Steering. Neuron. PMID 29290549 DOI: 10.1016/J.Neuron.2017.12.003  0.694
2017 Gracida X, Dion MF, Harris G, Zhang Y, Calarco JA. An Elongin-Cullin-SOCS Box Complex Regulates Stress-Induced Serotonergic Neuromodulation. Cell Reports. 21: 3089-3101. PMID 29241538 DOI: 10.1016/J.Celrep.2017.11.042  0.591
2017 Yu J, Yang W, Liu H, Hao Y, Zhang Y. An Aversive Response to Osmotic Upshift in Caenorhabditis elegans. Eneuro. 4. PMID 28451641 DOI: 10.1523/ENEURO.0282-16.2017  0.427
2017 Ghosh DD, Nitabach MN, Zhang Y, Harris G. Multisensory integration in C. elegans. Current Opinion in Neurobiology. 43: 110-118. PMID 28273525 DOI: 10.1016/J.Conb.2017.01.005  0.578
2016 Shen Y, Wen Q, Liu H, Zhong C, Qin Y, Harris G, Kawano T, Wu M, Xu T, Samuel AD, Zhang Y. An extrasynaptic GABAergic signal modulates a pattern of forward movement in Caenorhabditis elegans. Elife. 5. PMID 27138642 DOI: 10.7554/Elife.14197  0.747
2016 Shen Y, Wen Q, Liu H, Zhong C, Qin Y, Harris G, Kawano T, Wu M, Xu T, Samuel AD, Zhang Y. Author response: An extrasynaptic GABAergic signal modulates a pattern of forward movement in Caenorhabditis elegans Elife. DOI: 10.7554/Elife.14197.028  0.72
2015 Chen X, Song C, Liu Y, Qu L, Liu D, Zhang Y, Liu M. Development of an ELISA Based on Fusion VP2332-452 Antigen for Detecting Antibodies against Aleutian Mink Disease Virus. Journal of Clinical Microbiology. PMID 26582828 DOI: 10.1128/JCM.02625-15  0.317
2015 Allen EN, Ren J, Zhang Y, Alcedo J. Sensory systems: their impact on C. elegans survival. Neuroscience. 296: 15-25. PMID 24997267 DOI: 10.1016/j.neuroscience.2014.06.054  0.32
2014 Shen Y, Zhang J, Calarco JA, Zhang Y. EOL-1, the homolog of the mammalian Dom3Z, regulates olfactory learning in C. elegans. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 13364-70. PMID 25274815 DOI: 10.1523/JNEUROSCI.0230-14.2014  0.355
2014 Harris G, Shen Y, Ha H, Donato A, Wallis S, Zhang X, Zhang Y. Dissecting the signaling mechanisms underlying recognition and preference of food odors Journal of Neuroscience. 34: 9389-9403. PMID 25009271 DOI: 10.1523/Jneurosci.0012-14.2014  0.621
2014 Luo L, Wen Q, Ren J, Hendricks M, Gershow M, Qin Y, Greenwood J, Soucy ER, Klein M, Smith-Parker HK, Calvo AC, Colón-Ramos DA, Samuel AD, Zhang Y. Dynamic encoding of perception, memory, and movement in a C. elegans chemotaxis circuit. Neuron. 82: 1115-28. PMID 24908490 DOI: 10.1016/J.Neuron.2014.05.010  0.727
2014 Mao D, Zhang Y, Lu H, Zhang H. Molecular basis underlying inhibition of metastasis of gastric cancer by anti-VEGFa treatment. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 35: 8217-23. PMID 24850176 DOI: 10.1007/s13277-014-2095-6  0.41
2014 Fernandes de Abreu DA, Caballero A, Fardel P, Stroustrup N, Chen Z, Lee K, Keyes WD, Nash ZM, López-Moyado IF, Vaggi F, Cornils A, Regenass M, Neagu A, Ostojic I, Liu C, ... ... Zhang Y, et al. An insulin-to-insulin regulatory network orchestrates phenotypic specificity in development and physiology. Plos Genetics. 10: e1004225. PMID 24675767 DOI: 10.1371/Journal.Pgen.1004225  0.526
2014 Luo L, Cook N, Venkatachalam V, Martinez-Velazquez LA, Zhang X, Calvo AC, Hawk J, MacInnis BL, Frank M, Ng JH, Klein M, Gershow M, Hammarlund M, Goodman MB, Colón-Ramos DA, ... Zhang Y, et al. Bidirectional thermotaxis in Caenorhabditis elegans is mediated by distinct sensorimotor strategies driven by the AFD thermosensory neurons. Proceedings of the National Academy of Sciences of the United States of America. 111: 2776-81. PMID 24550307 DOI: 10.1073/Pnas.1315205111  0.62
2013 Hendricks M, Zhang Y. Complex RIA calcium dynamics and its function in navigational behavior. Worm. 2: e25546. PMID 24778936 DOI: 10.4161/worm.25546  0.452
2013 Mao D, Zhang Y, Lu H, Fu X. Association between X-ray repair cross-complementing group 1 Arg194Trp polymorphism and colorectal cancer risk. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 34: 2529-38. PMID 23857281 DOI: 10.1007/s13277-013-0760-9  0.396
2013 Chen Z, Hendricks M, Cornils A, Maier W, Alcedo J, Zhang Y. Two insulin-like peptides antagonistically regulate aversive olfactory learning in C. elegans. Neuron. 77: 572-85. PMID 23395381 DOI: 10.1016/j.neuron.2012.11.025  0.608
2013 Qin Y, Zhang X, Zhang Y. A neuronal signaling pathway of CaMKII and Gqα regulates experience-dependent transcription of tph-1. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 925-35. PMID 23325232 DOI: 10.1523/Jneurosci.2355-12.2013  0.715
2013 Lee H, Crane MM, Zhang Y, Lu H. Quantitative screening of genes regulating tryptophan hydroxylase transcription in Caenorhabditis elegans using microfluidics and an adaptive algorithm. Integrative Biology : Quantitative Biosciences From Nano to Macro. 5: 372-80. PMID 23168494 DOI: 10.1039/C2Ib20078C  0.505
2013 Alcedo J, Zhang Y. Molecular and Cellular Circuits Underlying Caenorhabditis elegans Olfactory Plasticity Handbook of Behavioral Neuroscience. 22: 112-123. DOI: 10.1016/B978-0-12-415823-8.00010-1  0.353
2012 Zhang X, Zhang Y. DBL-1, a TGF-β, is essential for Caenorhabditis elegans aversive olfactory learning. Proceedings of the National Academy of Sciences of the United States of America. 109: 17081-6. PMID 23019581 DOI: 10.1073/Pnas.1205982109  0.471
2012 Hendricks M, Ha H, Maffey N, Zhang Y. Compartmentalized calcium dynamics in a C. elegans interneuron encode head movement. Nature. 487: 99-103. PMID 22722842 DOI: 10.1038/Nature11081  0.59
2011 Cornils A, Gloeck M, Chen Z, Zhang Y, Alcedo J. Specific insulin-like peptides encode sensory information to regulate distinct developmental processes Development. 138: 1183-1193. PMID 21343369 DOI: 10.1242/Dev.060905  0.388
2010 Ha HI, Hendricks M, Shen Y, Gabel CV, Fang-Yen C, Qin Y, Colón-Ramos D, Shen K, Samuel AD, Zhang Y. Functional organization of a neural network for aversive olfactory learning in Caenorhabditis elegans. Neuron. 68: 1173-86. PMID 21172617 DOI: 10.1016/J.Neuron.2010.11.025  0.771
2009 Zhang X, Zhang Y. Neural-immune communication in Caenorhabditis elegans. Cell Host & Microbe. 5: 425-9. PMID 19454346 DOI: 10.1016/j.chom.2009.05.003  0.445
2008 Luo L, Gabel CV, Ha HI, Zhang Y, Samuel AD. Olfactory behavior of swimming C. elegans analyzed by measuring motile responses to temporal variations of odorants. Journal of Neurophysiology. 99: 2617-25. PMID 18367700 DOI: 10.1152/Jn.00053.2008  0.37
2007 Pradel E, Zhang Y, Pujol N, Matsuyama T, Bargmann CI, Ewbank JJ. Detection and avoidance of a natural product from the pathogenic bacterium Serratia marcescens by Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 104: 2295-300. PMID 17267603 DOI: 10.1073/pnas.0610281104  0.562
2005 Zhang Y, Lu H, Bargmann CI. Pathogenic bacteria induce aversive olfactory learning in Caenorhabditis elegans. Nature. 438: 179-84. PMID 16281027 DOI: 10.1038/Nature04216  0.675
2002 Zhang Y, Chalfie M. MTD-1, a touch-cell-specific membrane protein with a subtle effect on touch sensitivity. Mechanisms of Development. 119: 3-7. PMID 12385749 DOI: 10.1016/S0925-4773(02)00293-9  0.597
2002 Zhang Y, Ma C, Delohery T, Nasipak B, Foat BC, Bounoutas A, Bussemaker HJ, Kim SK, Chalfie M. Identification of genes expressed in C. elegans touch receptor neurons. Nature. 418: 331-5. PMID 12124626 DOI: 10.1038/Nature00891  0.576
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