☰

Nicolas Le Novère - Publications

Affiliations: 
1992-1999 Institut Pasteur, Paris, Paris, France 
 1999-2001 University of Cambridge, Cambridge, England, United Kingdom 
 2001-2003 Institut Pasteur, Paris, Paris, France 
 2003-2012 EMBL-European Bioinformatics Institute 
 2012- Babraham Institute, Babraham, England, United Kingdom 
Tree Info Similar researchers PubMed Report error

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Li L, Lai M, Cole S, Le Novère N, Edelstein SJ. Neurogranin stimulates Ca2+/calmodulin-dependent kinase II by suppressing calcineurin activity at specific calcium spike frequencies. Plos Computational Biology. 16: e1006991. PMID 32049957 DOI: 10.1371/Journal.Pcbi.1006991  0.306
2018 Waltemath D, Bergmann FT, Chaouiya C, Czauderna T, Gleeson P, Goble C, Golebiewski M, Hucka M, Juty N, Krebs O, Le Novère N, Mi H, Moraru II, Myers CJ, Nickerson D, et al. Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE). Standards in Genomic Sciences. 13: 17. PMID 30117501 DOI: 10.1186/S40793-018-0320-4  0.565
2016 Schreiber F, Bader GD, Gleeson P, Golebiewski M, Hucka M, Le Novère N, Myers C, Nickerson D, Sommer B, Walthemath D. Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016. Journal of Integrative Bioinformatics. 13: 289. PMID 28187405 DOI: 10.2390/Biecoll-Jib-2016-289  0.566
2016 Rodriguez N, Pettit JB, Dalle Pezze P, Li L, Henry A, van Iersel MP, Jalowicki G, Kutmon M, Natarajan KN, Tolnay D, Stefan MI, Evelo CT, Le Novère N. The systems biology format converter. Bmc Bioinformatics. 17: 154. PMID 27044654 DOI: 10.1186/S12859-016-1000-2  0.656
2015 Seeliger C, Le Novère N. Enabling surface dependent diffusion in spatial simulations using Smoldyn. Bmc Research Notes. 8: 752. PMID 26647064 DOI: 10.1186/S13104-015-1723-6  0.711
2015 Hucka M, Bergmann FT, Dräger A, Hoops S, Keating SM, Le Novère N, Myers CJ, Olivier BG, Sahle S, Schaff JC, Smith LP, Waltemath D, Wilkinson DJ. Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions. Journal of Integrative Bioinformatics. 12: 271. PMID 26528569 DOI: 10.2390/Biecoll-Jib-2015-271  0.613
2015 Schreiber F, Bader GD, Golebiewski M, Hucka M, Kormeier B, Le Novère N, Myers C, Nickerson D, Sommer B, Waltemath D, Weise S. Specifications of Standards in Systems and Synthetic Biology. Journal of Integrative Bioinformatics. 12: 258. PMID 26528556 DOI: 10.2390/Biecoll-Jib-2015-258  0.596
2015 Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, et al. Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831. PMID 26467284 DOI: 10.15252/Msb.20156157  0.556
2015 Rodriguez N, Thomas A, Watanabe L, Vazirabad IY, Kofia V, Gómez HF, Mittag F, Matthes J, Rudolph J, Wrzodek F, Netz E, Diamantikos A, Eichner J, Keller R, Wrzodek C, et al. JSBML 1.0: providing a smorgasbord of options to encode systems biology models. Bioinformatics (Oxford, England). PMID 26079347 DOI: 10.1093/Bioinformatics/Btv341  0.594
2015 Hucka M, Nickerson DP, Bader GD, Bergmann FT, Cooper J, Demir E, Garny A, Golebiewski M, Myers CJ, Schreiber F, Waltemath D, Le Novère N. Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative. Frontiers in Bioengineering and Biotechnology. 3: 19. PMID 25759811 DOI: 10.3389/Fbioe.2015.00019  0.6
2015 Chelliah V, Juty N, Ajmera I, Ali R, Dumousseau M, Glont M, Hucka M, Jalowicki G, Keating S, Knight-Schrijver V, Lloret-Villas A, Natarajan KN, Pettit JB, Rodriguez N, Schubert M, et al. BioModels: ten-year anniversary. Nucleic Acids Research. 43: D542-8. PMID 25414348 DOI: 10.1093/Nar/Gku1181  0.618
2014 Bergmann FT, Adams R, Moodie S, Cooper J, Glont M, Golebiewski M, Hucka M, Laibe C, Miller AK, Nickerson DP, Olivier BG, Rodriguez N, Sauro HM, Scharm M, Soiland-Reyes S, et al. COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project. Bmc Bioinformatics. 15: 369. PMID 25494900 DOI: 10.1186/S12859-014-0369-Z  0.619
2013 Mattioni M, Le Novère N. Integration of biochemical and electrical signaling-multiscale model of the medium spiny neuron of the striatum. Plos One. 8: e66811. PMID 23843966 DOI: 10.1371/Journal.Pone.0066811  0.752
2013 Stefan MI, Le Novère N. Cooperative binding. Plos Computational Biology. 9: e1003106. PMID 23843752 DOI: 10.1371/journal.pcbi.1003106  0.605
2012 Li L, Stefan MI, Le Novère N. Calcium input frequency, duration and amplitude differentially modulate the relative activation of calcineurin and CaMKII. Plos One. 7: e43810. PMID 22962589 DOI: 10.1371/Journal.Pone.0043810  0.634
2012 Mattioni M, Cohen U, Le Novère N. Neuronvisio: A Graphical User Interface with 3D Capabilities for NEURON. Frontiers in Neuroinformatics. 6: 20. PMID 22685429 DOI: 10.3389/Fninf.2012.00020  0.746
2012 Stefan MI, Marshall DP, Le Novère N. Structural analysis and stochastic modelling suggest a mechanism for calmodulin trapping by CaMKII. Plos One. 7: e29406. PMID 22279535 DOI: 10.1371/Journal.Pone.0029406  0.628
2012 Demir E, Cary MP, Paley S, Fukuda K, Lemer C, Vastrik I, Wu G, D'Eustachio P, Schaefer C, Luciano J, Schacherer F, Martinez-Flores I, Hu Z, Jimenez-Jacinto V, Joshi-Tope G, et al. The BioPAX community standard for pathway data sharing (Nature Biotechnology (2010) 28, (935-942)) Nature Biotechnology. 30: 365. DOI: 10.1038/Nbt0412-365C  0.536
2011 Le Novère N, Hucka M, Anwar N, Bader GD, Demir E, Moodie S, Sorokin A. Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE). Standards in Genomic Sciences. 5: 230-42. PMID 22180826 DOI: 10.4056/Sigs.5279417  0.598
2011 Waltemath D, Adams R, Bergmann FT, Hucka M, Kolpakov F, Miller AK, Moraru II, Nickerson D, Sahle S, Snoep JL, Le Novère N. Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language. Bmc Systems Biology. 5: 198. PMID 22172142 DOI: 10.1186/1752-0509-5-198  0.599
2010 Baldi BF, Hoyer C, Le Novère N. Schizophrenic: forever young? Genome Medicine. 2: 32. PMID 20497602 DOI: 10.1186/Gm153  0.721
2010 Tolle DP, Le Novère N. Brownian diffusion of AMPA receptors is sufficient to explain fast onset of LTP. Bmc Systems Biology. 4: 25. PMID 20233407 DOI: 10.1186/1752-0509-4-25  0.731
2010 Tolle DP, Le Novère N. Meredys, a multi-compartment reaction-diffusion simulator using multistate realistic molecular complexes. Bmc Systems Biology. 4: 24. PMID 20233406 DOI: 10.1186/1752-0509-4-24  0.745
2010 Edelstein SJ, Stefan MI, Le Novère N. Ligand depletion in vivo modulates the dynamic range and cooperativity of signal transduction. Plos One. 5: e8449. PMID 20052284 DOI: 10.1371/Journal.Pone.0008449  0.629
2009 Le Novère N, Hucka M, Mi H, Moodie S, Schreiber F, Sorokin A, Demir E, Wegner K, Aladjem MI, Wimalaratne SM, Bergman FT, Gauges R, Ghazal P, Kawaji H, Li L, et al. The Systems Biology Graphical Notation. Nature Biotechnology. 27: 735-41. PMID 19668183 DOI: 10.1038/Nbt.1558  0.61
2009 Stefan MI, Edelstein SJ, Le Novère N. Computing phenomenologic Adair-Klotz constants from microscopic MWC parameters. Bmc Systems Biology. 3: 68. PMID 19602261 DOI: 10.1186/1752-0509-3-68  0.653
2008 Guerlet G, Taly A, Prado de Carvalho L, Martz A, Jiang R, Specht A, Le Novère N, Grutter T. Comparative models of P2X2 receptor support inter-subunit ATP-binding sites. Biochemical and Biophysical Research Communications. 375: 405-9. PMID 18718445 DOI: 10.1016/J.Bbrc.2008.08.030  0.622
2008 Stefan MI, Edelstein SJ, Le Novère N. An allosteric model of calmodulin explains differential activation of PP2B and CaMKII. Proceedings of the National Academy of Sciences of the United States of America. 105: 10768-73. PMID 18669651 DOI: 10.1073/Pnas.0804672105  0.623
2008 Stefan MI, Edelstein SJ, Le Novère N. An allosteric model of calmodulin explains differential activation of PP2B and CaMKII (Proceedings of the National Academy of Sciences of the United States of America (2008) 105, 31, (10768-10773) DOI: 10.1073/pnas.0804672105) Proceedings of the National Academy of Sciences of the United States of America. 105: 19024. DOI: 10.1073/pnas.0810309105  0.615
2007 Shapiro BE, Finney A, Hucka M, Bornstein B, Funahashi A, Jouraku A, Keating SM, Le Novère N, Matthews J, Schilstra MJ. SBML models and MathSBML Introduction to Systems Biology. 395-421. DOI: 10.1007/978-1-59745-531-2_20  0.584
2003 Champtiaux N, Gotti C, Cordero-Erausquin M, David DJ, Przybylski C, Léna C, Clementi F, Moretti M, Rossi FM, Le Novère N, McIntosh JM, Gardier AM, Changeux JP. Subunit composition of functional nicotinic receptors in dopaminergic neurons investigated with knock-out mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 7820-9. PMID 12944511 DOI: 10.1523/Jneurosci.23-21-07820.2003  0.701
2000 Shimizu TS, Le Novère N, Levin MD, Beavil AJ, Sutton BJ, Bray D. Molecular model of a lattice of signalling proteins involved in bacterial chemotaxis. Nature Cell Biology. 2: 792-6. PMID 11056533 DOI: 10.1038/35041030  0.484
1999 Lukas RJ, Changeux JP, Le Novère N, Albuquerque EX, Balfour DJ, Berg DK, Bertrand D, Chiappinelli VA, Clarke PB, Collins AC, Dani JA, Grady SR, Kellar KJ, Lindstrom JM, Marks MJ, et al. International Union of Pharmacology. XX. Current status of the nomenclature for nicotinic acetylcholine receptors and their subunits. Pharmacological Reviews. 51: 397-401. PMID 10353988  0.492
Show low-probability matches.