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Prasenjit Mukherjee, Ph.D. - Publications

Affiliations: 
2008 The University of Mississippi, USA 
Area:
Pharmaceutical Chemistry
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16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Martin E, Mukherjee P, Tian L, Sullivan D. Abstract SY20-02: Discovering tool compounds and chemistry leads by highly accurate kinase virtual screening.: Cancer Research. 73. DOI: 10.1158/1538-7445.Am2013-Sy20-02  0.332
2012 Mukherjee P, Martin E. Profile-QSAR and Surrogate AutoShim protein-family modeling of proteases. Journal of Chemical Information and Modeling. 52: 2430-40. PMID 22607621 DOI: 10.1021/ci300059d  0.349
2012 Martin E, Mukherjee P. Kinase-kernel models: accurate in silico screening of 4 million compounds across the entire human kinome. Journal of Chemical Information and Modeling. 52: 156-70. PMID 22133092 DOI: 10.1021/Ci200314J  0.323
2011 Martin E, Mukherjee P, Sullivan D, Jansen J. Profile-QSAR: a novel meta-QSAR method that combines activities across the kinase family to accurately predict affinity, selectivity, and cellular activity. Journal of Chemical Information and Modeling. 51: 1942-56. PMID 21667971 DOI: 10.1021/Ci1005004  0.351
2011 Mukherjee P, Shah F, Desai P, Avery M. Inhibitors of SARS-3CLpro: virtual screening, biological evaluation, and molecular dynamics simulation studies. Journal of Chemical Information and Modeling. 51: 1376-92. PMID 21604711 DOI: 10.1021/Ci1004916  0.6
2011 Shah F, Mukherjee P, Gut J, Legac J, Rosenthal PJ, Tekwani BL, Avery MA. Identification of novel malarial cysteine protease inhibitors using structure-based virtual screening of a focused cysteine protease inhibitor library. Journal of Chemical Information and Modeling. 51: 852-64. PMID 21428453 DOI: 10.1021/Ci200029Y  0.64
2010 Mukherjee P, Desai P, Zhou YD, Avery M. Targeting the BH3 domain mediated protein-protein interaction of Bcl-xL through virtual screening. Journal of Chemical Information and Modeling. 50: 906-23. PMID 20392095 DOI: 10.1021/Ci1000373  0.571
2010 Shah F, Mukherjee P, Desai P, Avery M. Computational approaches for the discovery of cysteine protease inhibitors against malaria and SARS. Current Computer-Aided Drug Design. 6: 1-23. PMID 20370692 DOI: 10.2174/157340910790980142  0.611
2009 Pradhan A, Tripathi AK, Desai PV, Mukherjee PK, Avery MA, Walker LA, Tekwani BL. Structure and function of Plasmodium falciparum malate dehydrogenase: role of critical amino acids in co-substrate binding pocket. Biochimie. 91: 1509-17. PMID 19772885 DOI: 10.1016/J.Biochi.2009.09.005  0.535
2009 Shah F, Zhang SQ, Kandhari SP, Mukherjee P, Chittiboyina A, Avery MA, Avery BA. In vitro erythrocytic uptake studies of artemisinin and selected derivatives using LC-MS and 2D-QSAR analysis of uptake in parasitized erythrocytes. Bioorganic & Medicinal Chemistry. 17: 5325-31. PMID 19497754 DOI: 10.1016/J.Bmc.2009.05.026  0.63
2009 Pradhan A, Mukherjee P, Tripathi AK, Avery MA, Walker LA, Tekwani BL. Analysis of quaternary structure of a [LDH-like] malate dehydrogenase of Plasmodium falciparum with oligomeric mutants. Molecular and Cellular Biochemistry. 325: 141-8. PMID 19184366 DOI: 10.1007/S11010-009-0028-2  0.574
2008 Srivastava A, Mukherjee P, Desai PV, Avery MA, Tekwani BL. Structural analysis of farnesyl pyrophosphate synthase from parasitic protozoa, a potential chemotherapeutic target. Infectious Disorders Drug Targets. 8: 16-30. PMID 18473904 DOI: 10.2174/187152608784139587  0.615
2008 Mukherjee P, Desai PV, Srivastava A, Tekwani BL, Avery MA. Probing the structures of leishmanial farnesyl pyrophosphate synthases: homology modeling and docking studies. Journal of Chemical Information and Modeling. 48: 1026-40. PMID 18419114 DOI: 10.1021/Ci700355Z  0.601
2008 Mukherjee P, Pradhan A, Shah F, Tekwani BL, Avery MA. Structural insights into the Plasmodium falciparum histone deacetylase 1 (PfHDAC-1): A novel target for the development of antimalarial therapy. Bioorganic & Medicinal Chemistry. 16: 5254-65. PMID 18362073 DOI: 10.1016/J.Bmc.2008.03.005  0.621
2008 Mukherjee P, Desai P, Ross L, White EL, Avery MA. Structure-based virtual screening against SARS-3CL(pro) to identify novel non-peptidic hits. Bioorganic & Medicinal Chemistry. 16: 4138-49. PMID 18343121 DOI: 10.1016/J.Bmc.2008.01.011  0.624
2008 Choi SR, Mukherjee P, Avery MA. The fight against drug-resistant malaria: novel plasmodial targets and antimalarial drugs. Current Medicinal Chemistry. 15: 161-71. PMID 18220771 DOI: 10.2174/092986708783330575  0.632
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