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Tae-Kun Seo, Ph.D. - Publications

Affiliations: 
University of Tokyo, Bunkyō-ku, Tōkyō-to, Japan 
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Seo TK, Redelings BD, Thorne JL. Correlations between alignment gaps and nucleotide substitution or amino acid replacement. Proceedings of the National Academy of Sciences of the United States of America. 119: e2204435119. PMID 35972964 DOI: 10.1073/pnas.2204435119  0.607
2021 Seo TK, Gascuel O, Thorne JL. Measuring Phylogenetic Information of Incomplete Sequence Data. Systematic Biology. PMID 34469581 DOI: 10.1093/sysbio/syab073  0.6
2017 Seo TK, Thorne JL. Information Criteria for Comparing Partition Schemes. Systematic Biology. PMID 29309694 DOI: 10.1093/Sysbio/Syx097  0.562
2012 Park E, Hwang DS, Lee JS, Song JI, Seo TK, Won YJ. Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record. Molecular Phylogenetics and Evolution. 62: 329-45. PMID 22040765 DOI: 10.1016/J.Ympev.2011.10.008  0.38
2010 Seo TK. Classification of nucleotide sequences using support vector machines. Journal of Molecular Evolution. 71: 250-67. PMID 20740280 DOI: 10.1007/S00239-010-9380-9  0.374
2009 Seo TK, Kishino H. Statistical comparison of nucleotide, amino acid, and codon substitution models for evolutionary analysis of protein-coding sequences. Systematic Biology. 58: 199-210. PMID 20525578 DOI: 10.1093/Sysbio/Syp015  0.399
2008 Xiang QY, Thorne JL, Seo TK, Zhang W, Thomas DT, Ricklefs RE. Rates of nucleotide substitution in Cornaceae (Cornales)-Pattern of variation and underlying causal factors. Molecular Phylogenetics and Evolution. 49: 327-42. PMID 18682295 DOI: 10.1016/J.Ympev.2008.07.010  0.61
2008 Seo TK, Kishino H. Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins. Systematic Biology. 57: 367-77. PMID 18570032 DOI: 10.1080/10635150802158670  0.421
2008 Seo TK. Calculating bootstrap probabilities of phylogeny using multilocus sequence data. Molecular Biology and Evolution. 25: 960-71. PMID 18281270 DOI: 10.1093/Molbev/Msn043  0.426
2005 Seo TK, Kishino H, Thorne JL. Incorporating gene-specific variation when inferring and evaluating optimal evolutionary tree topologies from multilocus sequence data. Proceedings of the National Academy of Sciences of the United States of America. 102: 4436-41. PMID 15764703 DOI: 10.1073/Pnas.0408313102  0.591
2004 Seo TK, Kishino H, Thorne JL. Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences. Molecular Biology and Evolution. 21: 1201-13. PMID 15014159 DOI: 10.1093/Molbev/Msh088  0.607
2002 Seo TK, Thorne JL, Hasegawa M, Kishino H. Estimation of effective population size of HIV-1 within a host: a pseudomaximum-likelihood approach. Genetics. 160: 1283-93. PMID 11973287  0.556
2002 Seo TK, Thorne JL, Hasegawa M, Kishino H. A viral sampling design for testing the molecular clock and for estimating evolutionary rates and divergence times. Bioinformatics (Oxford, England). 18: 115-23. PMID 11836219 DOI: 10.1093/Bioinformatics/18.1.115  0.611
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