| Year |
Citation |
Score |
| 2023 |
Miles J, Lozano GL, Rajendhran J, Stabb EV, Handelsman J, Broderick NA. Massively parallel mutant selection identifies genetic determinants of colonization of . Biorxiv : the Preprint Server For Biology. PMID 38045230 DOI: 10.1101/2023.11.20.567573 |
0.651 |
|
| 2022 |
Chevrette MG, Thomas CS, Hurley A, Rosario-Meléndez N, Sankaran K, Tu Y, Hall A, Magesh S, Handelsman J. Microbiome composition modulates secondary metabolism in a multispecies bacterial community. Proceedings of the National Academy of Sciences of the United States of America. 119: e2212930119. PMID 36215464 DOI: 10.1073/pnas.2212930119 |
0.67 |
|
| 2022 |
Chevrette MG, Selem-Mojica N, Aguilar C, Labby K, Bustos-Diaz ED, Handelsman J, Barona-Gómez F. Evolutionary Genome Mining for the Discovery and Engineering of Natural Product Biosynthesis. Methods in Molecular Biology (Clifton, N.J.). 2489: 129-155. PMID 35524049 DOI: 10.1007/978-1-0716-2273-5_8 |
0.651 |
|
| 2022 |
Hurley A, Chevrette MG, Rosario-Meléndez N, Handelsman J. THOR's Hammer: the Antibiotic Koreenceine Drives Gene Expression in a Model Microbial Community. Mbio. e0248621. PMID 35435700 DOI: 10.1128/mbio.02486-21 |
0.684 |
|
| 2021 |
Chevrette MG, Handelsman J. Needles in haystacks: reevaluating old paradigms for the discovery of bacterial secondary metabolites. Natural Product Reports. 38: 2083-2099. PMID 34693961 DOI: 10.1039/d1np00044f |
0.67 |
|
| 2021 |
Hurley A, Chevrette MG, Acharya DD, Lozano GL, Garavito M, Heinritz J, Balderrama L, Beebe M, DenHartog ML, Corinaldi K, Engels R, Gutierrez A, Jona O, Putnam JHI, Rhodes B, ... ... Handelsman J, et al. Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery. Mbio. 12. PMID 33593964 DOI: 10.1128/mBio.03432-20 |
0.647 |
|
| 2020 |
Lozano GL, Guan C, Cao Y, Borlee BR, Broderick NA, Stabb EV, Handelsman J. A Chemical Counterpunch: Chromobacterium violaceum ATCC 31532 Produces Violacein in Response to Translation-Inhibiting Antibiotics. Mbio. 11. PMID 32430474 DOI: 10.1128/Mbio.00948-20 |
0.666 |
|
| 2020 |
Chevrette MG, Handelsman J. From Metagenomes to Molecules: Innovations in Functional Metagenomics Unlock Hidden Chemistry in the Human Microbiome. Biochemistry. PMID 31977194 DOI: 10.1021/Acs.Biochem.0C00033 |
0.647 |
|
| 2020 |
Mongui A, Lozano GL, Handelsman J, Restrepo S, Junca H. Design and validation of a transposon that promotes expression of genes in episomal DNA. Journal of Biotechnology. 310: 1-5. PMID 31954761 DOI: 10.1016/J.Jbiotec.2020.01.007 |
0.312 |
|
| 2019 |
Lozano GL, Park HB, Bravo JI, Armstrong EA, Denu JM, Stabb EV, Broderick NA, Crawford JM, Handelsman J. Bacterial analogs of plant tetrahydropyridine alkaloids mediate microbial interactions in a rhizosphere model system. Applied and Environmental Microbiology. PMID 30877115 DOI: 10.1128/Aem.03058-18 |
0.69 |
|
| 2019 |
Lozano GL, Bravo JI, Garavito Diago MF, Park HB, Hurley A, Peterson SB, Stabb EV, Crawford JM, Broderick NA, Handelsman J. Introducing THOR, a Model Microbiome for Genetic Dissection of Community Behavior. Mbio. 10. PMID 30837345 DOI: 10.1128/Mbio.02846-18 |
0.658 |
|
| 2019 |
Sivakumar R, Ranjani J, Vishnu US, Jayashree S, Lozano GL, Miles J, Broderick NA, Guan C, Gunasekaran P, Handelsman J, Rajendhran J. Evaluation of InSeq To Identify Genes Essential for PGPR2 Corn Root Colonization. G3 (Bethesda, Md.). PMID 30705119 DOI: 10.1534/G3.118.200928 |
0.362 |
|
| 2017 |
Fischer C, Trautman EP, Crawford JM, Stabb EV, Handelsman J, Broderick NA. Metabolite exchange between microbiome members produces compounds that influence Drosophila behavior. Elife. 6. PMID 28068220 DOI: 10.7554/Elife.18855 |
0.645 |
|
| 2016 |
Lozano GL, Holt J, Ravel J, Rasko DA, Thomas MG, Handelsman J. Draft Genome Sequence of Biocontrol Agent Bacillus cereus UW85. Genome Announcements. 4. PMID 27587823 DOI: 10.1128/Genomea.00910-16 |
0.326 |
|
| 2016 |
Stulberg ER, Lozano GL, Morin JB, Park H, Baraban EG, Mlot C, Heffelfinger C, Phillips GM, Rush JS, Phillips AJ, Broderick NA, Thomas MG, Stabb EV, Handelsman J. Genomic and Secondary Metabolite Analyses of Streptomyces sp. 2AW Provide Insight into the Evolution of the Cycloheximide Pathway. Frontiers in Microbiology. 7: 573. PMID 27199910 DOI: 10.3389/Fmicb.2016.00573 |
0.686 |
|
| 2016 |
Fischer CN, Trautman EP, Crawford JM, Stabb EV, Handelsman J, Broderick NA. Author response: Metabolite exchange between microbiome members produces compounds that influence Drosophila behavior Elife. DOI: 10.7554/Elife.18855.062 |
0.602 |
|
| 2015 |
Allen HK, An R, Handelsman J, Moe LA. A response regulator from a soil metagenome enhances resistance to the β-lactam antibiotic carbenicillin in Escherichia coli. Plos One. 10: e0120094. PMID 25782011 DOI: 10.1371/Journal.Pone.0120094 |
0.369 |
|
| 2015 |
Holt JF, Kiedrowski MR, Frank KL, Du J, Guan C, Broderick NA, Dunny GM, Handelsman J. Enterococcus faecalis 6-phosphogluconolactonase is required for both commensal and pathogenic interactions with Manduca sexta. Infection and Immunity. 83: 396-404. PMID 25385794 DOI: 10.1128/Iai.02442-14 |
0.36 |
|
| 2015 |
Miles J, Holt JF, Handelsman J. Allies and adversaries: Roles of the microbiome in infectious disease: Studying how nonnative pathogens and host-associated microbial communities interact help us better understand infectious diseases Microbe. 10: 375-380. DOI: 10.1128/Microbe.10.370.1 |
0.323 |
|
| 2014 |
Udikovic-Kolic N, Wichmann F, Broderick NA, Handelsman J. Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization. Proceedings of the National Academy of Sciences of the United States of America. 111: 15202-7. PMID 25288759 DOI: 10.1073/Pnas.1409836111 |
0.374 |
|
| 2014 |
Wichmann F, Udikovik-Kolic N, Andrew S, Handelsman J. Reply to "The natural environment may be the most important source of antibiotic resistance genes". Mbio. 5: e01421-14. PMID 25096881 DOI: 10.1128/Mbio.01421-14 |
0.339 |
|
| 2014 |
Shade A, Jones SE, Caporaso JG, Handelsman J, Knight R, Fierer N, Gilbert JA. Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity. Mbio. 5: e01371-14. PMID 25028427 DOI: 10.1128/Mbio.01371-14 |
0.315 |
|
| 2014 |
Wichmann F, Udikovic-Kolic N, Andrew S, Handelsman J. Diverse antibiotic resistance genes in dairy cow manure. Mbio. 5: e01017. PMID 24757214 DOI: 10.1128/Mbio.01017-13 |
0.36 |
|
| 2013 |
Blum JE, Fischer CN, Miles J, Handelsman J. Frequent replenishment sustains the beneficial microbiome of Drosophila melanogaster. Mbio. 4: e00860-13. PMID 24194543 DOI: 10.1128/Mbio.00860-13 |
0.304 |
|
| 2013 |
Shade A, Klimowicz AK, Spear RN, Linske M, Donato JJ, Hogan CS, McManus PS, Handelsman J. Streptomycin application has no detectable effect on bacterial community structure in apple orchard soil. Applied and Environmental Microbiology. 79: 6617-25. PMID 23974143 DOI: 10.1128/Aem.02017-13 |
0.398 |
|
| 2013 |
Baraban EG, Morin JB, Phillips GM, Phillips AJ, Strobel SA, Handelsman J. Xyolide, a bioactive nonenolide from an Amazonian endophytic fungus, Xylaria feejeensis. Tetrahedron Letters. 54: 4058-4060. PMID 23913990 DOI: 10.1016/J.Tetlet.2013.05.093 |
0.3 |
|
| 2013 |
Shade A, Caporaso JG, Handelsman J, Knight R, Fierer N. A meta-analysis of changes in bacterial and archaeal communities with time. The Isme Journal. 7: 1493-506. PMID 23575374 DOI: 10.1038/Ismej.2013.54 |
0.327 |
|
| 2013 |
Shade A, McManus PS, Handelsman J. Unexpected diversity during community succession in the apple flower microbiome. Mbio. 4. PMID 23443006 DOI: 10.1128/Mbio.00602-12 |
0.334 |
|
| 2012 |
Shade A, Peter H, Allison SD, Baho DL, Berga M, Bürgmann H, Huber DH, Langenheder S, Lennon JT, Martiny JB, Matulich KL, Schmidt TM, Handelsman J. Fundamentals of microbial community resistance and resilience. Frontiers in Microbiology. 3: 417. PMID 23267351 DOI: 10.3389/Fmicb.2012.00417 |
0.307 |
|
| 2012 |
Shade A, Hogan CS, Klimowicz AK, Linske M, McManus PS, Handelsman J. Culturing captures members of the soil rare biosphere. Environmental Microbiology. 14: 2247-52. PMID 22788977 DOI: 10.1111/J.1462-2920.2012.02817.X |
0.368 |
|
| 2012 |
Araujo JF, de Castro AP, Costa MM, Togawa RC, Júnior GJ, Quirino BF, Bustamante MM, Williamson L, Handelsman J, Krüger RH. Characterization of soil bacterial assemblies in Brazilian savanna-like vegetation reveals acidobacteria dominance. Microbial Ecology. 64: 760-70. PMID 22570118 DOI: 10.1007/S00248-012-0057-3 |
0.39 |
|
| 2012 |
McMahon MD, Guan C, Handelsman J, Thomas MG. Metagenomic analysis of Streptomyces lividans reveals host-dependent functional expression. Applied and Environmental Microbiology. 78: 3622-9. PMID 22427497 DOI: 10.1128/Aem.00044-12 |
0.373 |
|
| 2012 |
Shade A, Handelsman J. Beyond the Venn diagram: the hunt for a core microbiome. Environmental Microbiology. 14: 4-12. PMID 22004523 DOI: 10.1111/J.1462-2920.2011.02585.X |
0.3 |
|
| 2011 |
Rios-Velazquez C, Williamson LL, Cloud-Hansen KA, Allen HK, McMahon MD, Sabree ZL, Donato JJ, Handelsman J. Summer workshop in metagenomics: one week plus eight students equals gigabases of cloned DNA. Journal of Microbiology & Biology Education. 12: 120-6. PMID 23653755 DOI: 10.1128/Jmbe.V12I2.177 |
0.682 |
|
| 2011 |
de Castro AP, Quirino BF, Allen H, Williamson LL, Handelsman J, Krüger RH. Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content. Biotechnology Letters. 33: 2169-75. PMID 21748362 DOI: 10.1007/S10529-011-0693-6 |
0.356 |
|
| 2010 |
Schloss PD, Allen HK, Klimowicz AK, Mlot C, Gross JA, Savengsuksa S, McEllin J, Clardy J, Ruess RW, Handelsman J. Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin. Dna and Cell Biology. 29: 533-41. PMID 20626288 DOI: 10.1089/Dna.2010.1020 |
0.383 |
|
| 2010 |
Broderick NA, Vasquez E, Handelsman J, Raffa KF. Effect of clonal variation among hybrid poplars on susceptibility of gypsy moth (Lepidoptera: Lymantriidae) to Bacillus thuringiensis subsp. kurstaki. Journal of Economic Entomology. 103: 718-25. PMID 20568617 DOI: 10.1603/Ec09377 |
0.345 |
|
| 2010 |
Lang KS, Anderson JM, Schwarz S, Williamson L, Handelsman J, Singer RS. Novel florfenicol and chloramphenicol resistance gene discovered in Alaskan soil by using functional metagenomics. Applied and Environmental Microbiology. 76: 5321-6. PMID 20543056 DOI: 10.1128/Aem.00323-10 |
0.381 |
|
| 2010 |
Donato JJ, Moe LA, Converse BJ, Smart KD, Berklein FC, McManus PS, Handelsman J. Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins. Applied and Environmental Microbiology. 76: 4396-401. PMID 20453147 DOI: 10.1128/Aem.01763-09 |
0.343 |
|
| 2010 |
Allen HK, Donato J, Wang HH, Cloud-Hansen KA, Davies J, Handelsman J. Call of the wild: antibiotic resistance genes in natural environments. Nature Reviews. Microbiology. 8: 251-9. PMID 20190823 DOI: 10.1038/Nrmicro2312 |
0.305 |
|
| 2010 |
Robinson CJ, Schloss P, Ramos Y, Raffa K, Handelsman J. Robustness of the bacterial community in the cabbage white butterfly larval midgut. Microbial Ecology. 59: 199-211. PMID 19924467 DOI: 10.1007/S00248-009-9595-8 |
0.309 |
|
| 2009 |
Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Parsley LC, Goodman RM, Handelsman J. Isolation and cloning of high-molecular-weight metagenomic DNA from soil microorganisms. Cold Spring Harbor Protocols. 2009: pdb.prot5271. PMID 20147247 DOI: 10.1101/Pdb.Prot5271 |
0.754 |
|
| 2009 |
Klepzig KD, Adams AS, Handelsman J, Raffa KF. Symbioses: a key driver of insect physiological processes, ecological interactions, evolutionary diversification, and impacts on humans. Environmental Entomology. 38: 67-77. PMID 19791599 DOI: 10.1603/022.038.0109 |
0.311 |
|
| 2009 |
Broderick NA, Robinson CJ, McMahon MD, Holt J, Handelsman J, Raffa KF. Contributions of gut bacteria to Bacillus thuringiensis-induced mortality vary across a range of Lepidoptera. Bmc Biology. 7: 11. PMID 19261175 DOI: 10.1186/1741-7007-7-11 |
0.331 |
|
| 2009 |
Allen HK, Cloud-Hansen KA, Wolinski JM, Guan C, Greene S, Lu S, Boeyink M, Broderick NA, Raffa KF, Handelsman J. Resident microbiota of the gypsy moth midgut harbors antibiotic resistance determinants. Dna and Cell Biology. 28: 109-17. PMID 19206998 DOI: 10.1089/Dna.2008.0812 |
0.356 |
|
| 2009 |
Allen HK, Moe LA, Rodbumrer J, Gaarder A, Handelsman J. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil. The Isme Journal. 3: 243-51. PMID 18843302 DOI: 10.1038/Ismej.2008.86 |
0.376 |
|
| 2008 |
Borlee BR, Geske GD, Robinson CJ, Blackwell HE, Handelsman J. Quorum-sensing signals in the microbial community of the cabbage white butterfly larval midgut. The Isme Journal. 2: 1101-11. PMID 18650927 DOI: 10.1038/Ismej.2008.70 |
0.329 |
|
| 2008 |
Little AE, Robinson CJ, Peterson SB, Raffa KF, Handelsman J. Rules of engagement: interspecies interactions that regulate microbial communities. Annual Review of Microbiology. 62: 375-401. PMID 18544040 DOI: 10.1146/Annurev.Micro.030608.101423 |
0.322 |
|
| 2008 |
Handelsman J. Metagenomics is not enough. Dna and Cell Biology. 27: 219-21. PMID 18462065 DOI: 10.1089/Dna.2008.1503 |
0.305 |
|
| 2008 |
Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J. Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms. Applied and Environmental Microbiology. 74: 3302-5. PMID 18359830 DOI: 10.1128/Aem.02630-07 |
0.694 |
|
| 2008 |
Schloss PD, Handelsman J. A statistical toolbox for metagenomics: assessing functional diversity in microbial communities. Bmc Bioinformatics. 9: 34. PMID 18215273 DOI: 10.1186/1471-2105-9-34 |
0.351 |
|
| 2008 |
Isenbarger TA, Finney M, RÃos-Velázquez C, Handelsman J, Ruvkun G. Miniprimer PCR, a new lens for viewing the microbial world. Applied and Environmental Microbiology. 74: 840-9. PMID 18083877 DOI: 10.1128/Aem.01933-07 |
0.771 |
|
| 2007 |
Guan C, Ju J, Borlee BR, Williamson LL, Shen B, Raffa KF, Handelsman J. Signal mimics derived from a metagenomic analysis of the gypsy moth gut microbiota. Applied and Environmental Microbiology. 73: 3669-76. PMID 17435000 DOI: 10.1128/Aem.02617-06 |
0.344 |
|
| 2006 |
Broderick NA, Raffa KF, Handelsman J. Midgut bacteria required for Bacillus thuringiensis insecticidal activity. Proceedings of the National Academy of Sciences of the United States of America. 103: 15196-9. PMID 17005725 DOI: 10.1073/Pnas.0604865103 |
0.358 |
|
| 2006 |
Cloud-Hansen KA, Peterson SB, Stabb EV, Goldman WE, McFall-Ngai MJ, Handelsman J. Breaching the great wall: peptidoglycan and microbial interactions. Nature Reviews. Microbiology. 4: 710-6. PMID 16894338 DOI: 10.1038/Nrmicro1486 |
0.643 |
|
| 2006 |
Peterson SB, Dunn AK, Klimowicz AK, Handelsman J. Peptidoglycan from Bacillus cereus mediates commensalism with rhizosphere bacteria from the Cytophaga-Flavobacterium group. Applied and Environmental Microbiology. 72: 5421-7. PMID 16885294 DOI: 10.1128/Aem.02928-05 |
0.319 |
|
| 2006 |
Schloss PD, Handelsman J. Toward a census of bacteria in soil. Plos Computational Biology. 2: e92. PMID 16848637 DOI: 10.1371/Journal.Pcbi.0020092 |
0.374 |
|
| 2006 |
Sabree ZL, Bergendahl V, Liles MR, Burgess RR, Goodman RM, Handelsman J. Identification and characterization of the gene encoding the Acidobacterium capsulatum major sigma factor. Gene. 376: 144-51. PMID 16698197 DOI: 10.1016/J.Gene.2006.02.033 |
0.768 |
|
| 2006 |
Schloss PD, Handelsman J. Introducing TreeClimber, a test to compare microbial community structures. Applied and Environmental Microbiology. 72: 2379-84. PMID 16597933 DOI: 10.1128/Aem.72.4.2379-2384.2006 |
0.302 |
|
| 2006 |
Schloss PD, Delalibera I, Handelsman J, Raffa KF. Bacteria associated with the guts of two wood-boring beetles: Anoplophora glabripennis and Saperda vestita (Cerambycidae) Environmental Entomology. 35: 625-629. DOI: 10.1603/0046-225X-35.3.625 |
0.383 |
|
| 2006 |
Vasanthakumar A, Delalibera I, Handelsman J, Klepzig KD, Schloss PD, Raffa KF. Characterization of Gut-Associated Bacteria in Larvae and Adults of the Southern Pine Beetle, Dendroctonus frontalis Zimmermann Environmental Entomology. 35: 1710-1717. DOI: 10.1603/0046-225X(2006)35[1710:Cogbil]2.0.Co;2 |
0.34 |
|
| 2005 |
Williamson LL, Borlee BR, Schloss PD, Guan C, Allen HK, Handelsman J. Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor. Applied and Environmental Microbiology. 71: 6335-44. PMID 16204555 DOI: 10.1128/Aem.71.10.6335-6344.2005 |
0.342 |
|
| 2005 |
Schloss PD, Handelsman J. Metagenomics for studying unculturable microorganisms: cutting the Gordian knot. Genome Biology. 6: 229. PMID 16086859 DOI: 10.1186/Gb-2005-6-8-229 |
0.364 |
|
| 2005 |
Schloss PD, Handelsman J. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Applied and Environmental Microbiology. 71: 1501-6. PMID 15746353 DOI: 10.1128/Aem.71.3.1501-1506.2005 |
0.357 |
|
| 2005 |
Delalibera I, Handelsman J, Raffa KF. Contrasts in cellulolytic activities of gut microorganisms between the wood borer, Saperda vestita (Coleoptera: Cerambycidae), and the bark beetles, Ips pini and Dendroctonus frontalis (Coleoptera: Curculionidae) Environmental Entomology. 34: 541-547. DOI: 10.1603/0046-225X-34.3.541 |
0.358 |
|
| 2004 |
Schloss PD, Handelsman J. Status of the microbial census. Microbiology and Molecular Biology Reviews : Mmbr. 68: 686-91. PMID 15590780 DOI: 10.1128/Mmbr.68.4.686-691.2004 |
0.342 |
|
| 2004 |
Handelsman J. Metagenomics: application of genomics to uncultured microorganisms. Microbiology and Molecular Biology Reviews : Mmbr. 68: 669-85. PMID 15590779 DOI: 10.1128/Mmbr.68.4.669-685.2004 |
0.407 |
|
| 2004 |
Riesenfeld CS, Schloss PD, Handelsman J. Metagenomics: genomic analysis of microbial communities. Annual Review of Genetics. 38: 525-52. PMID 15568985 DOI: 10.1146/Annurev.Genet.38.072902.091216 |
0.362 |
|
| 2004 |
Schloss PD, Larget BR, Handelsman J. Integration of microbial ecology and statistics: a test to compare gene libraries. Applied and Environmental Microbiology. 70: 5485-92. PMID 15345436 DOI: 10.1128/Aem.70.9.5485-5492.2004 |
0.369 |
|
| 2004 |
Riesenfeld CS, Goodman RM, Handelsman J. Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environmental Microbiology. 6: 981-9. PMID 15305923 DOI: 10.1111/J.1462-2920.2004.00664.X |
0.598 |
|
| 2004 |
Broderick NA, Raffa KF, Goodman RM, Handelsman J. Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods. Applied and Environmental Microbiology. 70: 293-300. PMID 14711655 DOI: 10.1128/Aem.70.1.293-300.2004 |
0.575 |
|
| 2004 |
Emmert EA, Klimowicz AK, Thomas MG, Handelsman J. Genetics of zwittermicin a production by Bacillus cereus. Applied and Environmental Microbiology. 70: 104-13. PMID 14711631 DOI: 10.1128/Aem.70.1.104-113.2004 |
0.361 |
|
| 2003 |
Schloss PD, Handelsman J. Biotechnological prospects from metagenomics. Current Opinion in Biotechnology. 14: 303-10. PMID 12849784 DOI: 10.1016/S0958-1669(03)00067-3 |
0.344 |
|
| 2003 |
Liles MR, Manske BF, Bintrim SB, Handelsman J, Goodman RM. A census of rRNA genes and linked genomic sequences within a soil metagenomic library. Applied and Environmental Microbiology. 69: 2684-91. PMID 12732537 DOI: 10.1128/Aem.69.5.2684-2691.2003 |
0.719 |
|
| 2003 |
Dunn AK, Klimowicz AK, Handelsman J. Use of a promoter trap to identify Bacillus cereus genes regulated by tomato seed exudate and a rhizosphere resident, Pseudomonas aureofaciens. Applied and Environmental Microbiology. 69: 1197-205. PMID 12571047 DOI: 10.1128/Aem.69.2.1197-1205.2003 |
0.364 |
|
| 2003 |
Broderick NA, Goodman RM, Handelsman J, Raffa KF. Effect of Host Diet and Insect Source on Synergy of Gypsy Moth (Lepidoptera: Lymantriidae) Mortality toBacillus thuringiensissubsp.kurstakiby Zwittermicin A Environmental Entomology. 32: 387-391. DOI: 10.1603/0046-225X-32.2.387 |
0.5 |
|
| 2002 |
Dunn AK, Handelsman J. Toward an understanding of microbial communities through analysis of communication networks. Antonie Van Leeuwenhoek. 81: 565-74. PMID 12448752 DOI: 10.1023/A:1020565807627 |
0.338 |
|
| 2002 |
Gillespie DE, Brady SF, Bettermann AD, Cianciotto NP, Liles MR, Rondon MR, Clardy J, Goodman RM, Handelsman J. Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA. Applied and Environmental Microbiology. 68: 4301-6. PMID 12200279 DOI: 10.1128/Aem.68.9.4301-4306.2002 |
0.77 |
|
| 2002 |
Handelsman J, Liles M, Mann D, Riesenfeld C, Goodman RM. Cloning the metagenome: Culture-independent access to thediversity and functions of the uncultivated microbial world Methods in Microbiology. 33: 241-255. DOI: 10.1016/S0580-9517(02)33014-9 |
0.671 |
|
| 2001 |
Brady SF, Chao CJ, Handelsman J, Clardy J. Cloning and heterologous expression of a natural product biosynthetic gene cluster from eDNA. Organic Letters. 3: 1981-4. PMID 11418029 DOI: 10.1021/Ol015949K |
0.33 |
|
| 2001 |
Simon HM, Smith KP, Dodsworth JA, Guenthner B, Handelsman J, Goodman RM. Influence of tomato genotype on growth of inoculated and indigenous bacteria in the spermosphere. Applied and Environmental Microbiology. 67: 514-20. PMID 11157211 DOI: 10.1128/Aem.67.2.514-520.2001 |
0.51 |
|
| 2000 |
Kazmar ER, Goodman RM, Grau CR, Johnson DW, Nordheim EV, Undersander DJ, Handelsman J. Regression Analyses for Evaluating the Influence of Bacillus cereus on Alfalfa Yield Under Variable Disease Intensity. Phytopathology. 90: 657-65. PMID 18944546 DOI: 10.1094/Phyto.2000.90.6.657 |
0.522 |
|
| 2000 |
Rondon MR, August PR, Bettermann AD, Brady SF, Grossman TH, Liles MR, Loiacono KA, Lynch BA, MacNeil IA, Minor C, Tiong CL, Gilman M, Osburne MS, Clardy J, Handelsman J, et al. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms. Applied and Environmental Microbiology. 66: 2541-7. PMID 10831436 DOI: 10.1128/Aem.66.6.2541-2547.2000 |
0.733 |
|
| 2000 |
Bittinger MA, Handelsman J. Identification of genes in the RosR regulon of Rhizobium etli. Journal of Bacteriology. 182: 1706-13. PMID 10692377 DOI: 10.1128/Jb.182.6.1706-1713.2000 |
0.344 |
|
| 2000 |
Broderick NA, Goodman RM, Raffa KF, Handelsman J. Synergy Between Zwittermicin A andBacillus thuringiensissubsp.kurstakiAgainst Gypsy Moth (Lepidoptera: Lymantriidae) Environmental Entomology. 29: 101-107. DOI: 10.1603/0046-225X-29.1.101 |
0.451 |
|
| 1999 |
Raffel SJ, Kazmar ER, Winberg R, Oplinger ES, Handelsman J, Goodman RM, Grau CR. First Report of Root Rot of Soybeans Caused by Corynespora cassiicola in Wisconsin. Plant Disease. 83: 696. PMID 30845632 DOI: 10.1094/Pdis.1999.83.7.696B |
0.52 |
|
| 1999 |
Stohl EA, Milner JL, Handelsman J. Zwittermicin A biosynthetic cluster Gene. 237: 403-411. PMID 10521664 DOI: 10.1016/S0378-1119(99)00315-7 |
0.336 |
|
| 1999 |
Rondon MR, Goodman RM, Handelsman J. The Earth's bounty: assessing and accessing soil microbial diversity. Trends in Biotechnology. 17: 403-9. PMID 10481172 DOI: 10.1016/S0167-7799(99)01352-9 |
0.584 |
|
| 1999 |
Stohl EA, Brady SF, Clardy J, Handelsman J. ZmaR, a novel and widespread antibiotic resistance determinant that acetylates zwittermicin A. Journal of Bacteriology. 181: 5455-60. PMID 10464220 DOI: 10.1128/Jb.181.17.5455-5460.1999 |
0.313 |
|
| 1999 |
Rondon MR, Raffel SJ, Goodman RM, Handelsman J. Toward functional genomics in bacteria: analysis of gene expression in Escherichia coli from a bacterial artificial chromosome library of Bacillus cereus. Proceedings of the National Academy of Sciences of the United States of America. 96: 6451-5. PMID 10339608 DOI: 10.1073/Pnas.96.11.6451 |
0.581 |
|
| 1999 |
Smith KP, Handelsman J, Goodman RM. Genetic basis in plants for interactions with disease-suppressive bacteria. Proceedings of the National Academy of Sciences of the United States of America. 96: 4786-90. PMID 10220371 DOI: 10.1073/Pnas.96.9.4786 |
0.549 |
|
| 1999 |
Shang H, Chen J, Handelsman J, Goodman RM. Behavior of pythium Torulosum zoospores during their interaction with tobacco roots and Bacillus cereus. Current Microbiology. 38: 199-204. PMID 10069854 DOI: 10.1007/Pl00006787 |
0.537 |
|
| 1999 |
Emmert EA, Handelsman J. Biocontrol of plant disease: a (gram-) positive perspective. Fems Microbiology Letters. 171: 1-9. PMID 9987836 DOI: 10.1111/J.1574-6968.1999.Tb13405.X |
0.312 |
|
| 1999 |
Dunn AK, Handelsman J. A vector for promoter trapping in Bacillus cereus. Gene. 226: 297-305. PMID 9931504 DOI: 10.1016/S0378-1119(98)00544-7 |
0.311 |
|
| 1998 |
Handelsman J, Rondon MR, Brady SF, Clardy J, Goodman RM. Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chemistry & Biology. 5: R245-9. PMID 9818143 DOI: 10.1016/S1074-5521(98)90108-9 |
0.555 |
|
| 1998 |
O'Connell KP, Raffel SJ, Saville BJ, Handelsman J. Mutants of Rhizobium tropici strain CIAT899 that do not induce chlorosis in plants. Microbiology (Reading, England). 144: 2607-17. PMID 9782510 DOI: 10.1099/00221287-144-9-2607 |
0.317 |
|
| 1998 |
Silo-Suh LA, Stabb EV, Raffel SJ, Handelsman J. Target range of zwittermicin A, an aminopolyol antibiotic from Bacillus cereus. Current Microbiology. 37: 6-11. PMID 9625782 DOI: 10.1007/S002849900328 |
0.665 |
|
| 1998 |
Stabb EV, Handelsman J. Genetic analysis of zwittermicin A resistance in Escherichia coli: effects on membrane potential and RNA polymerase. Molecular Microbiology. 27: 311-22. PMID 9484887 DOI: 10.1046/J.1365-2958.1998.00678.X |
0.649 |
|
| 1998 |
Rosas JC, Castro JA, Robleto EA, Handelsman J. A method for screening Phaseolus vulgaris L. germplasm for preferential nodulation with a selected Rhizobium etli strain Plant and Soil. 203: 71-78. DOI: 10.1023/A:1004346114558 |
0.326 |
|
| 1997 |
Smith KP, Handelsman J, Goodman RM. Modeling dose-response relationships in biological control: partitioning host responses to the pathogen and biocontrol agent. Phytopathology. 87: 720-9. PMID 18945094 DOI: 10.1094/Phyto.1997.87.7.720 |
0.521 |
|
| 1997 |
Bittinger MA, Milner JL, Saville BJ, Handelsman J. rosR, A determinant of nodulation competitiveness in Rhizobium etli Molecular Plant-Microbe Interactions. 10: 180-186. PMID 9057324 DOI: 10.1094/Mpmi.1997.10.2.180 |
0.326 |
|
| 1997 |
Bintrim SB, Donohue TJ, Handelsman J, Roberts GP, Goodman RM. Molecular phylogeny of Archaea from soil. Proceedings of the National Academy of Sciences of the United States of America. 94: 277-82. PMID 8990199 DOI: 10.1073/Pnas.94.1.277 |
0.591 |
|
| 1996 |
Handelsman J, Stabb EV. Biocontrol of Soilborne Plant Pathogens. The Plant Cell. 8: 1855-1869. PMID 12239367 DOI: 10.1105/Tpc.8.10.1855 |
0.664 |
|
| 1996 |
Raffel SJ, Stabb EV, Milner JL, Handelsman J. Genotypic and phenotypic analysis of zwittermicin A-producing strains of Bacillus cereus Microbiology. 142: 3425-3436. PMID 9004505 DOI: 10.1099/13500872-142-12-3425 |
0.657 |
|
| 1996 |
Milner JL, Silo-Suh L, Lee JC, Haiyin HE, Clardy J, Handelsman JO. Production of kanosamine by Bacillus cereus UW85 Applied and Environmental Microbiology. 62: 3061-3065. PMID 8702302 DOI: 10.1128/Aem.62.8.3061-3065.1996 |
0.351 |
|
| 1996 |
Gilbert GS, Clayton MK, Handelsman J, Parke JL. Use of Cluster and Discriminant Analyses to Compare Rhizosphere Bacterial Communities Following Biological Perturbation Microbial Ecology. 32: 123-47. PMID 8688005 DOI: 10.1007/Bf00185884 |
0.365 |
|
| 1996 |
CHEN J, JACOBSON LM, HANDELSMAN J, GOODMAN RM. Compatibility of systemic acquired resistance and microbial biocontrol for suppression of plant disease in a laboratory assay Molecular Ecology. 5: 73-80. DOI: 10.1111/J.1365-294X.1996.Tb00292.X |
0.538 |
|
| 1996 |
O'Connell KP, Goodman RM, Handelsman J. Engineering the rhizosphere: Expressing a bias Trends in Biotechnology. 14: 83-88. DOI: 10.1016/0167-7799(96)80928-0 |
0.551 |
|
| 1995 |
Milner JL, Raffel SJ, Lethbridge BJ, Handelsman J. Culture conditions that influence accumulation of zwittermicin A by Bacillus cereus UW85 Applied Microbiology and Biotechnology. 43: 685-691. PMID 7546606 DOI: 10.1007/Bf00164774 |
0.31 |
|
| 1995 |
Osburn RM, Milner JL, Oplinger ES, Smith RS, Handelsman J. Effect of Bacillus cereus UW85 on the yield of soybean at two field sites in Wisconsin. Plant Disease. 79: 551-556. DOI: 10.1094/Pd-79-0551 |
0.301 |
|
| 1994 |
Silo-Suh LA, Lethbridge BJ, Raffel SJ, He H, Clardy J, Handelsman J. Biological activities of two fungistatic antibiotics produced by Bacillus cereus UW85. Applied and Environmental Microbiology. 60: 2023-30. PMID 8031096 DOI: 10.1128/Aem.60.6.2023-2030.1994 |
0.324 |
|
| 1994 |
Stabb EV, Jacobson LM, Handelsman J. Zwittermicin A-producing strains of Bacillus cereus from diverse soils Applied and Environmental Microbiology. 60: 4404-4412. PMID 7811080 DOI: 10.1128/Aem.60.12.4404-4412.1994 |
0.674 |
|
| 1993 |
O'connell KP, Handelsman J. Foliar Chlorosis in Symbiotic Host and Nonhost Plants Induced by Rhizobium tropici Type B Strains. Applied and Environmental Microbiology. 59: 2184-9. PMID 16348994 DOI: 10.1128/Aem.59.7.2184-2189.1993 |
0.3 |
|
| 1993 |
Beattie GA, Handelsman J. Evaluation of a strategy for identifying nodulation competitiveness genes in Rhizobium leguminosarum biovar phaseoli Journal of General Microbiology. 139: 529-538. PMID 8473861 DOI: 10.1099/00221287-139-3-529 |
0.327 |
|
| 1993 |
Halverson LJ, Clayton MK, Handelsman J. Variable stability of antibiotic-resistance markers in Bacillus cereus UW85 in the soybean rhizosphere in the field. Molecular Ecology. 2: 65-78. PMID 8180735 DOI: 10.1111/J.1365-294X.1993.Tb00001.X |
0.686 |
|
| 1993 |
Gilbert GS, Parke JL, Clayton MK, Handelsman J. Effects of an introduced bacterium on bacterial communities on roots Ecology. 74: 840-854. DOI: 10.2307/1940810 |
0.402 |
|
| 1993 |
Halverson LJ, Clayton MK, Handelsman J. Population biology of Bacillus cereus UW85 in the rhizosphere of field-grown soybeans Soil Biology and Biochemistry. 25: 485-493. DOI: 10.1016/0038-0717(93)90074-L |
0.674 |
|
| 1991 |
Halverson LJ, Handelsman J. Enhancement of soybean nodulation by Bacillus cereus UW85 in the field and in a growth chamber. Applied and Environmental Microbiology. 57: 2767-70. PMID 1768151 |
0.654 |
|
| 1990 |
Handelsman J, Raffel S, Mester EH, Wunderlich L, Grau CR. Biological Control of Damping-Off of Alfalfa Seedlings with Bacillus cereus UW85. Applied and Environmental Microbiology. 56: 713-8. PMID 16348145 DOI: 10.1128/Aem.56.3.713-718.1990 |
0.331 |
|
| 1989 |
Beattie GA, Clayton MK, Handelsman J. Quantitative comparison of the laboratory and field competitiveness of Rhizobium leguminosarum biovar phaseoli Applied and Environmental Microbiology. 55: 2755-2761. PMID 2624457 DOI: 10.1128/Aem.55.11.2755-2761.1989 |
0.304 |
|
| 1986 |
Ugalde RA, Handelsman J, Brill WJ. Role of galactosyltransferase activity in phage sensitivity and nodulation competitiveness of Rhizobium meliloti. Journal of Bacteriology. 166: 148-54. PMID 3082851 DOI: 10.1128/jb.166.1.148-154.1986 |
0.538 |
|
| 1985 |
Handelsman J, Brill WJ. Erwinia herbicola isolates from alfalfa plants may play a role in nodulation of alfalfa by Rhizobium meliloti. Applied and Environmental Microbiology. 49: 818-21. PMID 4004214 DOI: 10.1128/AEM.49.4.818-821.1985 |
0.555 |
|
| 1984 |
Handelsman J, Ugalde RA, Brill WJ. Rhizobium meliloti competitiveness and the alfalfa agglutinin. Journal of Bacteriology. 157: 703-7. PMID 6698937 DOI: 10.1128/JB.157.3.703-707.1984 |
0.543 |
|
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