| Year |
Citation |
Score |
| 2023 |
Ibhagui OY, Li D, Han H, Peng G, Meister ML, Gui Z, Qiao J, Salarian M, Dong B, Yuan Y, Xu Y, Yang H, Tan S, Satyanarayana G, Xue S, ... ... Yang JJ, et al. Early Detection and Staging of Lung Fibrosis Enabled by Collagen-Targeted MRI Protein Contrast Agent. Chemical & Biomedical Imaging. 1: 268-285. PMID 37388961 DOI: 10.1021/cbmi.3c00023 |
0.655 |
|
| 2023 |
Ghane MA, Wei W, Yakout DW, Allen ZD, Miller CL, Dong B, Yang JJ, Fang N, Mabb AM. Arc ubiquitination regulates endoplasmic reticulum-mediated Ca release and CaMKII signaling. Frontiers in Cellular Neuroscience. 17: 1091324. PMID 36998269 DOI: 10.3389/fncel.2023.1091324 |
0.33 |
|
| 2021 |
Gorkhali R, Tian L, Dong B, Bagchi P, Deng X, Pawar S, Duong D, Fang N, Seyfried N, Yang J. Extracellular calcium alters calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathway. Scientific Reports. 11: 20576. PMID 34663830 DOI: 10.1038/s41598-021-00067-2 |
0.452 |
|
| 2021 |
Deng X, Yao XQ, Berglund K, Dong B, Ouedraogo D, Ghane MA, Zhuo Y, McBean C, Wei ZZ, Gozem S, Yu SP, Wei L, Fang N, Mabb AM, Gadda G, ... ... Yang J, et al. Tuning Protein Dynamics to Sense Rapid Endoplasmic Reticulum Calcium Dynamics. Angewandte Chemie (International Ed. in English). PMID 34436811 DOI: 10.1002/anie.202108443 |
0.43 |
|
| 2021 |
Reddish FN, Miller CL, Deng X, Dong B, Patel AA, Ghane MA, Mosca B, McBean C, Wu S, Solntsev KM, Zhuo Y, Gadda G, Fang N, Cox DN, Mabb AM, ... ... Yang JJ, et al. Rapid subcellular calcium responses and dynamics by calcium sensor G-CatchER. Iscience. 24: 102129. PMID 33665552 DOI: 10.1016/j.isci.2021.102129 |
0.38 |
|
| 2020 |
Deng X, Xin Y, Miller CL, Hamelberg D, Kirberger M, Moremen KW, Hu J, Yang JJ. Structural Mechanism of Cooperative Regulation of Calcium-Sensing Receptor-Mediated Cellular Signaling. Current Opinion in Physiology. 17: 269-277. PMID 33709045 DOI: 10.1016/J.Cophys.2020.08.020 |
0.822 |
|
| 2020 |
Andrews C, Xu Y, Kirberger M, Yang JJ. Structural Aspects and Prediction of Calmodulin-Binding Proteins. International Journal of Molecular Sciences. 22. PMID 33396740 DOI: 10.3390/ijms22010308 |
0.831 |
|
| 2020 |
Tang S, Deng X, Jiang J, Kirberger M, Yang JJ. Design of Calcium-Binding Proteins to Sense Calcium. Molecules (Basel, Switzerland). 25. PMID 32375353 DOI: 10.3390/Molecules25092148 |
0.821 |
|
| 2020 |
Salarian M, Ibhagui OY, Yang JJ. Molecular imaging of extracellular matrix proteins with targeted probes using magnetic resonance imaging. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. e1622. PMID 32126587 DOI: 10.1002/Wnan.1622 |
0.704 |
|
| 2020 |
Tan S, Yang H, Xue S, Qiao J, Salarian M, Hekmatyar K, Meng Y, Mukkavilli R, Pu F, Odubade OY, Harris W, Hai Y, Yushak ML, Morales-Tirado VM, Mittal P, ... ... Yang JJ, et al. Chemokine receptor 4 targeted protein MRI contrast agent for early detection of liver metastases. Science Advances. 6: eaav7504. PMID 32083172 DOI: 10.1126/Sciadv.Aav7504 |
0.678 |
|
| 2020 |
Deng X, Miller CL, Dong B, Reddish FN, Zhuo Y, McBean C, Ouedraogo D, Gadda G, Fang N, Yang JJ. Design and Application of Ultrafast Fluorescent Calcium Indicators for Monitoring Subcellular Calcium Dynamics Biophysical Journal. 118: 404a. DOI: 10.1016/J.Bpj.2019.11.2294 |
0.331 |
|
| 2019 |
Salarian M, Turaga RC, Xue S, Nezafati M, Hekmatyar K, Qiao J, Zhang Y, Tan S, Ibhagui OY, Hai Y, Li J, Mukkavilli R, Sharma M, Mittal P, Min X, ... ... Yang JJ, et al. Early detection and staging of chronic liver diseases with a protein MRI contrast agent. Nature Communications. 10: 4777. PMID 31664017 DOI: 10.1038/S41467-019-11984-2 |
0.681 |
|
| 2019 |
Salarian M, Yang H, Turaga RC, Tan S, Qiao J, Xue S, Gui Z, Peng G, Han H, Mittal P, Grossniklaus HE, Yang JJ. Precision detection of liver metastasis by collagen-targeted protein MRI contrast agent. Biomaterials. 224: 119478. PMID 31542517 DOI: 10.1016/J.Biomaterials.2019.119478 |
0.692 |
|
| 2019 |
Salarian M, Xue S, Ibhagui OY, Yang JJ. Designing Calcium-Binding Proteins for Molecular MR Imaging. Methods in Molecular Biology (Clifton, N.J.). 1929: 111-125. PMID 30710270 DOI: 10.1007/978-1-4939-9030-6_8 |
0.72 |
|
| 2018 |
Evans PR, Gerber KJ, Dammer EB, Duong DM, Goswami D, Lustberg DJ, Zou J, Yang JJ, Dudek SM, Griffin PR, Seyfried NT, Hepler JR. Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca2+/CaM) and CaM Kinase II (CaMKII) Binding Partner. Journal of Proteome Research. PMID 29518331 DOI: 10.1021/Acs.Jproteome.8B00027 |
0.5 |
|
| 2017 |
Zou J, Salarian M, Chen Y, Zhuo Y, Brown NE, Hepler JR, Yang J. Direct Visualization of Interaction between Calmodulin and Connexin45. The Biochemical Journal. PMID 28963343 DOI: 10.1042/Bcj20170426 |
0.849 |
|
| 2017 |
Reddish FN, Miller CL, Gorkhali R, Yang JJ. Monitoring ER/SR Calcium Release with the Targeted Ca2+ Sensor CatchER. Journal of Visualized Experiments : Jove. PMID 28570539 DOI: 10.3791/55822 |
0.422 |
|
| 2017 |
Reddish FN, Miller CL, Gorkhali R, Yang JJ. Calcium Dynamics Mediated by the Endoplasmic/Sarcoplasmic Reticulum and Related Diseases. International Journal of Molecular Sciences. 18. PMID 28489021 DOI: 10.3390/Ijms18051024 |
0.533 |
|
| 2017 |
Zou J, Jiang JY, Yang JJ. Molecular Basis for Modulation of Metabotropic Glutamate Receptors and Their Drug Actions by Extracellular Ca(2). International Journal of Molecular Sciences. 18. PMID 28335551 DOI: 10.3390/Ijms18030672 |
0.505 |
|
| 2017 |
Yang J, Reddish F, Miller C, Gorkali R, Treves S, Zorzato F. Novel Local RYR1 Junctional Calcium Responses and Dynamics by Improved Calcium Sensor Catcher Biophysical Journal. 112: 331a. DOI: 10.1016/J.Bpj.2016.11.1790 |
0.499 |
|
| 2016 |
Zhang C, Miller CL, Gorkhali R, Zou J, Huang K, Brown EM, Yang JJ. Molecular Basis of the Extracellular Ligands Mediated Signaling by the Calcium Sensing Receptor. Frontiers in Physiology. 7: 441. PMID 27746744 DOI: 10.3389/Fphys.2016.00441 |
0.503 |
|
| 2016 |
Zhang C, Zhang T, Zou J, Miller CL, Gorkhali R, Yang JY, Schilmiller A, Wang S, Huang K, Brown EM, Moremen KW, Hu J, Yang JJ. Structural basis for regulation of human calcium-sensing receptor by magnesium ions and an unexpected tryptophan derivative co-agonist. Science Advances. 2: e1600241. PMID 27386547 DOI: 10.1126/Sciadv.1600241 |
0.45 |
|
| 2016 |
Turaga RC, Yin L, Yang JJ, Lee H, Ivanov I, Yan C, Yang H, Grossniklaus HE, Wang S, Ma C, Sun L, Liu ZR. Rational design of a protein that binds integrin αvβ3 outside the ligand binding site. Nature Communications. 7: 11675. PMID 27241473 DOI: 10.1038/Ncomms11675 |
0.714 |
|
| 2016 |
Gorkhali R, Huang K, Kirberger M, Yang JJ. Defining potential roles of Pb(2+) in neurotoxicity from a calciomics approach. Metallomics : Integrated Biometal Science. PMID 27108875 DOI: 10.1039/C6Mt00038J |
0.855 |
|
| 2016 |
Pu F, Salarian M, Xue S, Qiao J, Feng J, Tan S, Patel A, Li X, Mamouni K, Hekmatyar K, Zou J, Wu D, Yang JJ. Prostate-specific membrane antigen targeted protein contrast agents for molecular imaging of prostate cancer by MRI. Nanoscale. PMID 26961235 DOI: 10.1039/C5Nr09071G |
0.699 |
|
| 2015 |
Pu F, Qiao J, Xue S, Yang H, Patel A, Wei L, Hekmatyar K, Salarian M, Grossniklaus HE, Liu ZR, Yang JJ. GRPR-targeted Protein Contrast Agents for Molecular Imaging of Receptor Expression in Cancers by MRI. Scientific Reports. 5: 16214. PMID 26577829 DOI: 10.1038/Srep16214 |
0.717 |
|
| 2015 |
Tang S, Reddish F, Zhuo Y, Yang JJ. Fast kinetics of calcium signaling and sensor design. Current Opinion in Chemical Biology. 27: 90-7. PMID 26151819 DOI: 10.1016/J.Cbpa.2015.06.014 |
0.703 |
|
| 2015 |
Xue S, Yang H, Qiao J, Pu F, Jiang J, Hubbard K, Hekmatyar K, Langley J, Salarian M, Long RC, Bryant RG, Hu XP, Grossniklaus HE, Liu ZR, Yang JJ. Protein MRI contrast agent with unprecedented metal selectivity and sensitivity for liver cancer imaging. Proceedings of the National Academy of Sciences of the United States of America. 112: 6607-12. PMID 25971726 DOI: 10.1073/Pnas.1423021112 |
0.677 |
|
| 2015 |
Hsieh YH, Zou J, Jin JS, Yang H, Chen Y, Jiang C, Yang J, Tai PC. Monitoring channel activities of proteoliposomes with SecA and Cx26 gap junction in single oocytes. Analytical Biochemistry. 480: 58-66. PMID 25862083 DOI: 10.1016/J.Ab.2015.04.005 |
0.688 |
|
| 2015 |
Zhang C, Miller CL, Brown EM, Yang JJ. The calcium sensing receptor: from calcium sensing to signaling. Science China. Life Sciences. 58: 14-27. PMID 25576451 DOI: 10.1007/S11427-014-4779-Y |
0.52 |
|
| 2015 |
Zhuo Y, Solntsev KM, Reddish F, Tang S, Yang JJ. Effect of Ca²⁺ on the steady-state and time-resolved emission properties of the genetically encoded fluorescent sensor CatchER. The Journal of Physical Chemistry. B. 119: 2103-11. PMID 24836743 DOI: 10.1021/Jp501707N |
0.706 |
|
| 2015 |
Tang S, Reddish F, Zhuo Y, Yang JJ. Fast kinetics of calcium signaling and sensor design Current Opinion in Chemical Biology. 27: 90-97. DOI: 10.1016/j.cbpa.2015.06.014 |
0.642 |
|
| 2014 |
Zhang C, Mulpuri N, Hannan FM, Nesbit MA, Thakker RV, Hamelberg D, Brown EM, Yang JJ. Role of Ca2+ and L-Phe in regulating functional cooperativity of disease-associated "toggle" calcium-sensing receptor mutations. Plos One. 9: e113622. PMID 25420019 DOI: 10.1371/Journal.Pone.0113622 |
0.492 |
|
| 2014 |
Zhang C, Zhuo Y, Moniz HA, Wang S, Moremen KW, Prestegard JH, Brown EM, Yang JJ. Direct determination of multiple ligand interactions with the extracellular domain of the calcium-sensing receptor. The Journal of Biological Chemistry. 289: 33529-42. PMID 25305020 DOI: 10.1074/Jbc.M114.604652 |
0.561 |
|
| 2014 |
Chen Y, Xue S, Zou J, Lopez JR, Yang JJ, Perez CF. Myoplasmic resting Ca2+ regulation by ryanodine receptors is under the control of a novel Ca2+-binding region of the receptor. The Biochemical Journal. 460: 261-71. PMID 24635445 DOI: 10.1042/Bj20131553 |
0.795 |
|
| 2014 |
Xue S, Qiao J, Jiang J, Hubbard K, White N, Wei L, Li S, Liu ZR, Yang JJ. Design of ProCAs (protein-based Gd(3+) MRI contrast agents) with high dose efficiency and capability for molecular imaging of cancer biomarkers. Medicinal Research Reviews. 34: 1070-99. PMID 24615853 DOI: 10.1002/Med.21313 |
0.303 |
|
| 2014 |
Zou J, Salarian M, Chen Y, Veenstra R, Louis CF, Yang JJ. Gap junction regulation by calmodulin. Febs Letters. 588: 1430-8. PMID 24440348 DOI: 10.1016/J.Febslet.2014.01.003 |
0.852 |
|
| 2014 |
Zhang C, Huang Y, Jiang Y, Mulpuri N, Wei L, Hamelberg D, Brown EM, Yang JJ. Identification of an L-phenylalanine binding site enhancing the cooperative responses of the calcium-sensing receptor to calcium. The Journal of Biological Chemistry. 289: 5296-309. PMID 24394414 DOI: 10.1074/Jbc.M113.537357 |
0.811 |
|
| 2014 |
Jiang JY, Nagaraju M, Meyer RC, Zhang L, Hamelberg D, Hall RA, Brown EM, Conn PJ, Yang JJ. Extracellular calcium modulates actions of orthosteric and allosteric ligands on metabotropic glutamate receptor 1α. The Journal of Biological Chemistry. 289: 1649-61. PMID 24280223 DOI: 10.1074/Jbc.M113.507665 |
0.522 |
|
| 2013 |
Zhang Y, Reddish F, Tang S, Zhuo Y, Wang YF, Yang JJ, Weber IT. Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallographica. Section D, Biological Crystallography. 69: 2309-19. PMID 24311573 DOI: 10.1107/S0907444913021306 |
0.737 |
|
| 2013 |
Kirberger M, Wong HC, Jiang J, Yang JJ. Metal toxicity and opportunistic binding of Pb(2+) in proteins. Journal of Inorganic Biochemistry. 125: 40-9. PMID 23692958 DOI: 10.1016/J.Jinorgbio.2013.04.002 |
0.859 |
|
| 2013 |
Xue S, Qiao J, Pu F, Cameron M, Yang JJ. Design of a novel class of protein-based magnetic resonance imaging contrast agents for the molecular imaging of cancer biomarkers. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. 5: 163-79. PMID 23335551 DOI: 10.1002/Wnan.1205 |
0.325 |
|
| 2013 |
Wang H, Gao X, Yang JJ, Liu ZR. Interaction between p68 RNA helicase and Ca2+-calmodulin promotes cell migration and metastasis. Nature Communications. 4: 1354. PMID 23322042 DOI: 10.1038/Ncomms2345 |
0.42 |
|
| 2013 |
Zhou Y, Xue S, Chen Y, Yang JJ. Probing Ca2+-binding capability of viral proteins with the EF-hand motif by grafting approach. Methods in Molecular Biology (Clifton, N.J.). 963: 37-53. PMID 23296603 DOI: 10.1007/978-1-62703-230-8_3 |
0.823 |
|
| 2013 |
Zhou Y, Xue S, Yang JJ. Calciomics: integrative studies of Ca2+-binding proteins and their interactomes in biological systems. Metallomics : Integrated Biometal Science. 5: 29-42. PMID 23235533 DOI: 10.1039/C2Mt20009K |
0.716 |
|
| 2013 |
Zhuo Y, Tang S, Wang Z, Reddish F, Zhang Y, Pennati A, Solntsev KM, Delbono O, Weber I, Gadda G, Yang JJ. Design and Application of Fluorescent Calcium Binding Proteins with Fast Kinetics Biophysical Journal. 104: 530a. DOI: 10.1016/J.Bpj.2012.11.2933 |
0.717 |
|
| 2013 |
Zhang C, Zhuo Y, Feng J, Strachan H, Mulpuri N, Hamelberg D, Moremen K, Brown EM, Yang JJ. Hetero Interaction with an Amino Acid Globally Enhances Cooperative Activation of CaSR in Response to Extracellular Signaling Biophysical Journal. 104: 402a-403a. DOI: 10.1016/J.Bpj.2012.11.2246 |
0.456 |
|
| 2013 |
Jiang Y, Meyer R, Wong H, Wang X, Brown EM, Hall R, Conn J, Yang J. Effects of Extracellular Calcium on the Modulation of Metabotropic Glutamate Receptor 1 Alpha (mGluR1α) by L-Quis, (S)-Mcpg, Cpccoet and Ro 67-4853 Biophysical Journal. 104: 401a-402a. DOI: 10.1016/J.Bpj.2012.11.2241 |
0.783 |
|
| 2012 |
Zhao K, Wang X, Wong HC, Wohlhueter R, Kirberger MP, Chen G, Yang JJ. Predicting Ca2+ -binding sites using refined carbon clusters. Proteins. 80: 2666-79. PMID 22821762 DOI: 10.1002/Prot.24149 |
0.847 |
|
| 2012 |
Hannan FM, Nesbit MA, Zhang C, Cranston T, Curley AJ, Harding B, Fratter C, Rust N, Christie PT, Turner JJ, Lemos MC, Bowl MR, Bouillon R, Brain C, Bridges N, ... ... Yang JJ, et al. Identification of 70 calcium-sensing receptor mutations in hyper- and hypo-calcaemic patients: evidence for clustering of extracellular domain mutations at calcium-binding sites. Human Molecular Genetics. 21: 2768-78. PMID 22422767 DOI: 10.1093/Hmg/Dds105 |
0.499 |
|
| 2012 |
Xu Q, Kopp RF, Chen Y, Yang JJ, Roe MW, Veenstra RD. Gating of connexin 43 gap junctions by a cytoplasmic loop calmodulin binding domain. American Journal of Physiology. Cell Physiology. 302: C1548-56. PMID 22422398 DOI: 10.1152/Ajpcell.00319.2011 |
0.795 |
|
| 2012 |
Chen Y, Naik SG, Krzystek J, Shin S, Nelson WH, Xue S, Yang JJ, Davidson VL, Liu A. Role of calcium in metalloenzymes: effects of calcium removal on the axial ligation geometry and magnetic properties of the catalytic diheme center in MauG. Biochemistry. 51: 1586-97. PMID 22320333 DOI: 10.1021/Bi201575F |
0.397 |
|
| 2012 |
Gao X, Wang H, Yang JJ, Liu X, Liu ZR. Pyruvate kinase M2 regulates gene transcription by acting as a protein kinase. Molecular Cell. 45: 598-609. PMID 22306293 DOI: 10.1016/J.Molcel.2012.01.001 |
0.309 |
|
| 2012 |
Wang ZM, Tang S, Messi ML, Yang JJ, Delbono O. Residual sarcoplasmic reticulum Ca2+ concentration after Ca2+ release in skeletal myofibers from young adult and old mice. PflüGers Archiv : European Journal of Physiology. 463: 615-24. PMID 22249494 DOI: 10.1007/S00424-012-1073-3 |
0.748 |
|
| 2012 |
Li S, Jiang J, Zou J, Qiao J, Xue S, Wei L, Long R, Wang L, Castiblanco A, White N, Ngo J, Mao H, Liu ZR, Yang JJ. PEGylation of protein-based MRI contrast agents improves relaxivities and biocompatibilities. Journal of Inorganic Biochemistry. 107: 111-8. PMID 22178673 DOI: 10.1016/J.Jinorgbio.2011.11.004 |
0.31 |
|
| 2012 |
Chen Y, Zhou Y, Wong H, Zou J, Jiang J, Lurtz MM, Louis CF, Yang JJ. Identification of Additional Calmodulin Binding Regions in Connexin43 Biophysical Journal. 102: 108a. DOI: 10.1016/J.Bpj.2011.11.607 |
0.828 |
|
| 2012 |
Jiang Y, Yang J. Modulating Drug Effects of Metabotropic Glutamate Receptor 1 Alpha (mGluR1α) by Extracellular Ca2+ Biophysical Journal. 102: 509a. DOI: 10.1016/J.Bpj.2011.11.2787 |
0.783 |
|
| 2012 |
Zhang C, Hannan F, Huang Y, Jiang Y, Nagaraju M, Thakker R, Hamelberg D, Brown E, Yang J. Disease Related Mutations Adjacent to Predicted Multiple Ca2+ Binding Sites of Ca2+-Sensing Receptor Altering Intracellular Ca2+ Oscillations via Extracellular Calcium and Amino Acid Signaling Biophysical Journal. 102: 507a. DOI: 10.1016/J.Bpj.2011.11.2779 |
0.792 |
|
| 2012 |
Jiang J, Wong H, Liu X, Zhou Y, Balog EM, Yang JJ. Dissecting the Interaction Mode of Calmodulin and Modulating the Regulation of Ryanodine Receptor1 by Tuning Calcium Binding Affinity with Calmodulin Biophysical Journal. 102: 306a. DOI: 10.1016/J.Bpj.2011.11.1688 |
0.727 |
|
| 2012 |
Yang JJ. Visualizing Ca2+-Binding Sites using Refined Oxygen and Carbon Clusters Biophysical Journal. 102: 1-5. DOI: 10.1016/J.Bpj.2011.11.1006 |
0.565 |
|
| 2012 |
Chen N, Tang S, Xue S, Yang JJ. Enzyme Sensors for Living Cells Methods in Cell Biology. 112: 421-437. DOI: 10.1016/B978-0-12-405914-6.00024-X |
0.654 |
|
| 2011 |
Tang S, Wong HC, Wang ZM, Huang Y, Zou J, Zhuo Y, Pennati A, Gadda G, Delbono O, Yang JJ. Design and application of a class of sensors to monitor Ca2+ dynamics in high Ca2+ concentration cellular compartments. Proceedings of the National Academy of Sciences of the United States of America. 108: 16265-70. PMID 21914846 DOI: 10.1073/Pnas.1103015108 |
0.779 |
|
| 2011 |
Chen Y, Zhou Y, Lin X, Wong HC, Xu Q, Jiang J, Wang S, Lurtz MM, Louis CF, Veenstra RD, Yang JJ. Molecular interaction and functional regulation of connexin50 gap junctions by calmodulin. The Biochemical Journal. 435: 711-22. PMID 21320072 DOI: 10.1042/Bj20101726 |
0.839 |
|
| 2011 |
Wei L, Li S, Yang J, Ye Y, Zou J, Wang L, Long R, Zurkiya O, Zhao T, Johnson J, Qiao J, Zhou W, Castiblanco A, Maor N, Chen Y, ... ... Yang JJ, et al. Protein-based MRI contrast agents for molecular imaging of prostate cancer. Molecular Imaging and Biology : Mib : the Official Publication of the Academy of Molecular Imaging. 13: 416-23. PMID 20574851 DOI: 10.1007/S11307-010-0342-9 |
0.766 |
|
| 2011 |
Zhang C, Huang Y, Jiang Y, Wong H, Wang X, Castiblanco A, Wei L, Brown E, Yang JJ. Differential Activation of Intracellular Calcium Oscillations by Multiple Calcium and L-Phenylalanine Binding Sites Located at the Extracellular Domain of Calcium-Sensing-Receptor Biophysical Journal. 100: 86a. DOI: 10.1016/J.Bpj.2010.12.676 |
0.769 |
|
| 2011 |
Tang S, Zhuo Y, Jiang Y, Wong H, Wang Z, Delbono O, Yang JJ. Rational Design and Structural Analysis of Calcium Biosensors and their Application to the Study of SR/ER Calcium Dynamics Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.3224 |
0.851 |
|
| 2011 |
Zhuo Y, Tang S, Jiang Y, Zhang C, Reddish F, Yang JJ. Application of Designed Calcium Sensors with Fast Kinetic Responses Biophysical Journal. 100: 554a. DOI: 10.1016/J.Bpj.2010.12.3223 |
0.796 |
|
| 2011 |
Chen Y, Zhou Y, Wong H, Lin X, Xu Q, Wang X, Jiang J, Louis CF, Veenstra R, Yang JJ. Regulation of Intercellular Regulation of Signaling via Gap Junction Biophysical Journal. 100: 262a. DOI: 10.1016/J.Bpj.2010.12.1644 |
0.815 |
|
| 2010 |
Huang Y, Zhou Y, Wong HC, Castiblanco A, Chen Y, Brown EM, Yang JJ. Calmodulin regulates Ca2+-sensing receptor-mediated Ca2+ signaling and its cell surface expression. The Journal of Biological Chemistry. 285: 35919-31. PMID 20826781 DOI: 10.1074/Jbc.M110.147918 |
0.824 |
|
| 2010 |
Jiang J, Zhou Y, Zou J, Chen Y, Patel P, Yang JJ, Balog EM. Site-specific modification of calmodulin Ca²(+) affinity tunes the skeletal muscle ryanodine receptor activation profile. The Biochemical Journal. 432: 89-99. PMID 20815817 DOI: 10.1042/Bj20100505 |
0.796 |
|
| 2010 |
Kirberger M, Wang X, Zhao K, Tang S, Chen G, Yang JJ. Integration of Diverse Research Methods to Analyze and Engineer Ca-Binding Proteins: From Prediction to Production. Current Bioinformatics. 5: 68-80. PMID 20802832 DOI: 10.2174/157489310790596358 |
0.821 |
|
| 2010 |
Jiang Y, Huang Y, Wong HC, Zhou Y, Wang X, Yang J, Hall RA, Brown EM, Yang JJ. Elucidation of a novel extracellular calcium-binding site on metabotropic glutamate receptor 1{alpha} (mGluR1{alpha}) that controls receptor activation. The Journal of Biological Chemistry. 285: 33463-74. PMID 20705606 DOI: 10.1074/Jbc.M110.147033 |
0.848 |
|
| 2010 |
Wang X, Zhao K, Kirberger M, Wong H, Chen G, Yang JJ. Analysis and prediction of calcium-binding pockets from apo-protein structures exhibiting calcium-induced localized conformational changes. Protein Science : a Publication of the Protein Society. 19: 1180-90. PMID 20512971 DOI: 10.1002/Pro.394 |
0.854 |
|
| 2010 |
Zhou Y, Tzeng WP, Wong HC, Ye Y, Jiang J, Chen Y, Huang Y, Suppiah S, Frey TK, Yang JJ. Calcium-dependent association of calmodulin with the rubella virus nonstructural protease domain. The Journal of Biological Chemistry. 285: 8855-68. PMID 20086014 DOI: 10.1074/Jbc.M109.097063 |
0.845 |
|
| 2010 |
Chen Y, Zhou Y, Wong H, Lin X, Xu Q, Lurtz MM, Louis CF, Veenstra RD, Yang JJ. Cam Interaction and Binding Mode Study with Peptide from Intracellular Loop of Cx50 Biophysical Journal. 98: 94a. DOI: 10.1016/J.Bpj.2009.12.528 |
0.838 |
|
| 2010 |
Xu Q, Chen Y, Yang JJ, Veenstra RD. Calcium-Calmodulin Regulation of Connexin43 Involves a Cytoplasmic Loop Domain Biophysical Journal. 98: 93a-94a. DOI: 10.1016/J.Bpj.2009.12.527 |
0.777 |
|
| 2010 |
Tang S, Wong H, Zou J, Huang Y, Yang JJ. Rational Design and Structrual Analysis of Ca2+ Biosensor and Application in Skeletal Muscle Cells Biophysical Journal. 98: 296a-297a. DOI: 10.1016/J.Bpj.2009.12.1614 |
0.788 |
|
| 2009 |
Maniccia AW, Yang W, Johnson JA, Li S, Tjong H, Zhou HX, Shaket LA, Yang JJ. Inverse tuning of metal binding affinity and protein stability by altering charged coordination residues in designed calcium binding proteins. Pmc Biophysics. 2: 11. PMID 20025729 DOI: 10.1186/1757-5036-2-11 |
0.866 |
|
| 2009 |
Huang Y, Zhou Y, Wong HC, Chen Y, Chen Y, Wang S, Castiblanco A, Liu A, Yang JJ. A single EF-hand isolated from STIM1 forms dimer in the absence and presence of Ca2+. The Febs Journal. 276: 5589-97. PMID 19694801 DOI: 10.1111/J.1742-4658.2009.07240.X |
0.831 |
|
| 2009 |
Chen N, Huang Y, Yang L, Liu R, Yang JJ. Designing caspase-3 sensors for imaging of apoptosis in living cells. Chemistry (Weinheim An Der Bergstrasse, Germany). 15: 9311-4. PMID 19655355 DOI: 10.1002/Chem.200901439 |
0.404 |
|
| 2009 |
Zhou Y, Frey TK, Yang JJ. Viral calciomics: interplays between Ca2+ and virus. Cell Calcium. 46: 1-17. PMID 19535138 DOI: 10.1016/J.Ceca.2009.05.005 |
0.701 |
|
| 2009 |
Chen N, Ye Y, Zou J, Li S, Wang S, Martin A, Wohlhueter R, Yang JJ. Fluorescence complementation via EF-hand interactions. Journal of Biotechnology. 142: 205-13. PMID 19500621 DOI: 10.1016/J.Jbiotec.2009.05.007 |
0.711 |
|
| 2009 |
Holder AN, Ellis AL, Zou J, Chen N, Yang JJ. Facilitating chromophore formation of engineered Ca(2+) binding green fluorescent proteins. Archives of Biochemistry and Biophysics. 486: 27-34. PMID 19358822 DOI: 10.1016/J.Abb.2009.03.016 |
0.82 |
|
| 2009 |
Zhou Y, Yang W, Lurtz MM, Chen Y, Jiang J, Huang Y, Louis CF, Yang JJ. Calmodulin mediates the Ca2+-dependent regulation of Cx44 gap junctions. Biophysical Journal. 96: 2832-48. PMID 19348766 DOI: 10.1016/J.Bpj.2008.12.3941 |
0.838 |
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| 2009 |
Chen N, Zou J, Wang S, Ye Y, Huang Y, Gadda G, Yang JJ. Designing protease sensors for real-time imaging of trypsin activation in pancreatic cancer cells. Biochemistry. 48: 3519-26. PMID 19271729 DOI: 10.1021/Bi802289V |
0.685 |
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| 2009 |
Huang Y, Zhou Y, Castiblanco A, Yang W, Brown EM, Yang JJ. Multiple Ca(2+)-binding sites in the extracellular domain of the Ca(2+)-sensing receptor corresponding to cooperative Ca(2+) response. Biochemistry. 48: 388-98. PMID 19102677 DOI: 10.1021/Bi8014604 |
0.74 |
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| 2009 |
Wang X, Kirberger M, Qiu F, Chen G, Yang JJ. Towards predicting Ca2+-binding sites with different coordination numbers in proteins with atomic resolution. Proteins. 75: 787-98. PMID 19003991 DOI: 10.1002/Prot.22285 |
0.832 |
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| 2009 |
Zhou Y, Tzeng WP, Ye Y, Huang Y, Li S, Chen Y, Frey TK, Yang JJ. A cysteine-rich metal-binding domain from rubella virus non-structural protein is essential for viral protease activity and virus replication. The Biochemical Journal. 417: 477-83. PMID 18795894 DOI: 10.1042/Bj20081468 |
0.82 |
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| 2009 |
Zou J, Delgado M, Huang Y, Tang S, Jiang Y, McIntyre B, Wang A, Yang JJ. Chromophore Formation of Fluorescence Proteins and Its Application of Developing Ca2+ Sensors Biophysical Journal. 96: 120a. DOI: 10.1016/J.Bpj.2008.12.529 |
0.849 |
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| 2009 |
Huang Y, Zhou Y, Castiblanco A, Wong H, Chen Y, Yang W, Brown EM, Yang JJ. Integration of Extracellular and Intracellular Calcium Signals via Calcium-Sensing Receptor (CaSR) Biophysical Journal. 96: 117a. DOI: 10.1016/J.Bpj.2008.12.515 |
0.723 |
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| 2009 |
Tang S, Wong H, Huang Y, Zou J, Lee H, Yang JJ. Rational Design of Ca2+ Biosensor Biophysical Journal. 96: 539a-540a. DOI: 10.1016/J.Bpj.2008.12.2787 |
0.852 |
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| 2009 |
Kirberger M, Zou J, Jiang J, Yang J. Protein Selectivity Factors as a Molecular Basis for Metal Toxicity Biophysical Journal. 96: 445a. DOI: 10.1016/J.Bpj.2008.12.2288 |
0.816 |
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| 2008 |
Li S, Yang W, Maniccia AW, Barrow D, Tjong H, Zhou HX, Yang JJ. Rational design of a conformation-switchable Ca2+- and Tb3+-binding protein without the use of multiple coupled metal-binding sites. The Febs Journal. 275: 5048-61. PMID 18785925 DOI: 10.1111/J.1742-4658.2008.06638.X |
0.865 |
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| 2008 |
Kirberger M, Yang JJ. Structural differences between Pb2+- and Ca2+-binding sites in proteins: implications with respect to toxicity. Journal of Inorganic Biochemistry. 102: 1901-9. PMID 18684507 DOI: 10.1016/J.Jinorgbio.2008.06.014 |
0.849 |
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| 2008 |
Kirberger M, Wang X, Deng H, Yang W, Chen G, Yang JJ. Statistical analysis of structural characteristics of protein Ca2+-binding sites. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 13: 1169-81. PMID 18594878 DOI: 10.1007/S00775-008-0402-7 |
0.826 |
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| 2008 |
Yang JJ, Yang J, Wei L, Zurkiya O, Yang W, Li S, Zou J, Zhou Y, Maniccia AL, Mao H, Zhao F, Malchow R, Zhao S, Johnson J, Hu X, et al. Rational design of protein-based MRI contrast agents. Journal of the American Chemical Society. 130: 9260-7. PMID 18576649 DOI: 10.1021/Ja800736H |
0.612 |
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| 2008 |
Jones LM, Yang W, Maniccia AW, Harrison A, van der Merwe PA, Yang JJ. Rational design of a novel calcium-binding site adjacent to the ligand-binding site on CD2 increases its CD48 affinity. Protein Science : a Publication of the Protein Society. 17: 439-49. PMID 18287277 DOI: 10.1110/Ps.073328208 |
0.858 |
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| 2007 |
Zhang Y, Li M, Chandrasekaran S, Gao X, Fang X, Lee HW, Hardcastle K, Yang J, Wang B. A unique quinolineboronic acid-based supramolecular structure that relies on double intermolecular B-N bonds for self-assembly in solid state and in solution. Tetrahedron. 63: 3287-3292. PMID 18414645 DOI: 10.1016/J.Tet.2007.02.042 |
0.621 |
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| 2007 |
Zou J, Hofer AM, Lurtz MM, Gadda G, Ellis AL, Chen N, Huang Y, Holder A, Ye Y, Louis CF, Welshhans K, Rehder V, Yang JJ. Developing sensors for real-time measurement of high Ca2+ concentrations. Biochemistry. 46: 12275-88. PMID 17924653 DOI: 10.1021/Bi7007307 |
0.843 |
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| 2007 |
Zhou Y, Yang W, Lurtz MM, Ye Y, Huang Y, Lee HW, Chen Y, Louis CF, Yang JJ. Identification of the calmodulin binding domain of connexin 43. The Journal of Biological Chemistry. 282: 35005-17. PMID 17901047 DOI: 10.1074/Jbc.M707728200 |
0.851 |
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| 2007 |
Huang Y, Zhou Y, Yang W, Butters R, Lee HW, Li S, Castiblanco A, Brown EM, Yang JJ. Identification and dissection of Ca(2+)-binding sites in the extracellular domain of Ca(2+)-sensing receptor. The Journal of Biological Chemistry. 282: 19000-10. PMID 17478419 DOI: 10.1074/Jbc.M701096200 |
0.838 |
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| 2007 |
Zhou Y, Tzeng WP, Yang W, Zhou Y, Ye Y, Lee HW, Frey TK, Yang J. Identification of a Ca2+-binding domain in the rubella virus nonstructural protease. Journal of Virology. 81: 7517-28. PMID 17475644 DOI: 10.1128/Jvi.00605-07 |
0.86 |
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| 2007 |
Liu Y, Tong Q, Zhou Y, Lee HW, Yang JJ, Bühring HJ, Chen YT, Ha B, Chen CX, Yang Y, Zen K. Functional elements on SIRPalpha IgV domain mediate cell surface binding to CD47. Journal of Molecular Biology. 365: 680-93. PMID 17070842 DOI: 10.1016/J.Jmb.2006.09.079 |
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| 2007 |
Zhang Y, Li M, Chandrasekaran S, Gao X, Fang X, Lee HW, Hardcastle K, Yang J, Wang B. Corrigendum to "A unique quinolineboronic acid-based supramolecular structure that relies on double intermolecular B-N bonds for self-assembly in solid state and in solution". [Tetrahedron 63 (2007) 3287-3292] (DOI:10.1016/j.tet.2007.02.042) Tetrahedron. 63: 9256. DOI: 10.1016/J.Tet.2007.06.077 |
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| 2006 |
Zhou Y, Yang W, Kirberger M, Lee HW, Ayalasomayajula G, Yang JJ. Prediction of EF-hand calcium-binding proteins and analysis of bacterial EF-hand proteins. Proteins. 65: 643-55. PMID 16981205 DOI: 10.1002/Prot.21139 |
0.85 |
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| 2006 |
Maniccia AW, Yang W, Li SY, Johnson JA, Yang JJ. Using protein design to dissect the effect of charged residues on metal binding and protein stability. Biochemistry. 45: 5848-56. PMID 16669627 DOI: 10.1021/Bi052508Q |
0.859 |
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| 2006 |
Deng H, Chen G, Yang W, Yang JJ. Predicting calcium-binding sites in proteins - a graph theory and geometry approach. Proteins. 64: 34-42. PMID 16617426 DOI: 10.1002/Prot.20973 |
0.446 |
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| 2006 |
Carroll A, Yang W, Ye Y, Simmons R, Yang JJ. Amyloid fibril formation by a domain of rat cell adhesion molecule. Cell Biochemistry and Biophysics. 44: 241-9. PMID 16456226 DOI: 10.1385/Cbb:44:2:241 |
0.644 |
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| 2005 |
Yang W, Wilkins AL, Li S, Ye Y, Yang JJ. The effects of Ca2+ binding on the dynamic properties of a designed Ca2+-binding protein. Biochemistry. 44: 8267-73. PMID 15938616 DOI: 10.1021/Bi050463N |
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| 2005 |
Zou J, Ye Y, Welshhans K, Lurtz M, Ellis AL, Louis C, Rehder V, Yang JJ. Expression and optical properties of green fluorescent protein expressed in different cellular environments. Journal of Biotechnology. 119: 368-78. PMID 15935502 DOI: 10.1016/J.Jbiotec.2005.04.001 |
0.779 |
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| 2005 |
Ye Y, Lee HW, Yang W, Yang JJ. Calcium and lanthanide affinity of the EF-loops from the C-terminal domain of calmodulin. Journal of Inorganic Biochemistry. 99: 1376-83. PMID 15917089 DOI: 10.1016/J.Jinorgbio.2005.03.011 |
0.845 |
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| 2005 |
Ye Y, Lee HW, Yang W, Shealy S, Yang JJ. Probing site-specific calmodulin calcium and lanthanide affinity by grafting. Journal of the American Chemical Society. 127: 3743-50. PMID 15771508 DOI: 10.1021/Ja042786X |
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| 2005 |
Yang W, Wilkins AL, Ye Y, Liu ZR, Li SY, Urbauer JL, Hellinga HW, Kearney A, van der Merwe PA, Yang JJ. Design of a calcium-binding protein with desired structure in a cell adhesion molecule. Journal of the American Chemical Society. 127: 2085-93. PMID 15713084 DOI: 10.1021/Ja0431307 |
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| 2004 |
Yang L, Yang J, Huang Y, Liu ZR. Phosphorylation of p68 RNA helicase regulates RNA binding by the C-terminal domain of the protein. Biochemical and Biophysical Research Communications. 314: 622-30. PMID 14733953 DOI: 10.1016/J.Bbrc.2003.12.129 |
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| 2003 |
Yang JJ, Gawthrop A, Ye Y. Obtaining site-specific calcium-binding affinities of calmodulin. Protein and Peptide Letters. 10: 331-45. PMID 14529487 DOI: 10.2174/0929866033478852 |
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| 2003 |
Ye Y, Shealy S, Lee HW, Torshin I, Harrison R, Yang JJ. A grafting approach to obtain site-specific metal-binding properties of EF-hand proteins. Protein Engineering. 16: 429-34. PMID 12874376 DOI: 10.1093/Protein/Gzg051 |
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| 2003 |
Yang W, Jones LM, Isley L, Ye Y, Lee HW, Wilkins A, Liu ZR, Hellinga HW, Malchow R, Ghazi M, Yang JJ. Rational design of a calcium-binding protein. Journal of the American Chemical Society. 125: 6165-71. PMID 12785848 DOI: 10.1021/Ja034724X |
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| 2002 |
Ellis AL, Christian Mason J, Lee HW, Strekowski L, Patonay G, Choi H, Yang JJ. Design, synthesis, and characterization of a calcium-sensitive near infrared dye. Talanta. 56: 1099-107. PMID 18968590 DOI: 10.1016/S0039-9140(01)00641-5 |
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| 2002 |
Yang JJ, Ye Y, Carroll A, Yang W, Lee HW. Structural biology of the cell adhesion protein CD2: alternatively folded states and structure-function relation. Current Protein & Peptide Science. 2: 1-17. PMID 12369898 DOI: 10.2174/1389203013381251 |
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Wilkins AL, Ye Y, Yang W, Lee HW, Liu ZR, Yang JJ. Metal-binding studies for a de novo designed calcium-binding protein. Protein Engineering. 15: 571-4. PMID 12200539 DOI: 10.1093/Protein/15.7.571 |
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Lee HW, Yang W, Ye Y, Liu ZR, Glushka J, Yang JJ. Isolated EF-loop III of calmodulin in a scaffold protein remains unpaired in solution using pulsed-field-gradient NMR spectroscopy. Biochimica Et Biophysica Acta. 1598: 80-7. PMID 12147347 DOI: 10.1016/S0167-4838(02)00338-2 |
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Yang W, Lee HW, Hellinga H, Yang JJ. Structural analysis, identification, and design of calcium-binding sites in proteins. Proteins. 47: 344-56. PMID 11948788 DOI: 10.1002/Prot.10093 |
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Yang JJ, Yang H, Ye Y, Hopkins H, Hastings G. Temperature-induced formation of a non-native intermediate state of the all beta-sheet protein CD2. Cell Biochemistry and Biophysics. 36: 1-18. PMID 11939369 DOI: 10.1385/Cbb:36:1:01 |
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Ye Y, Lee HW, Yang W, Shealy SJ, Wilkins AL, Liu ZR, Torshin I, Harrison R, Wohlhueter R, Yang JJ. Metal binding affinity and structural properties of an isolated EF-loop in a scaffold protein. Protein Engineering. 14: 1001-13. PMID 11809931 DOI: 10.1093/Protein/14.12.1001 |
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Yang W, Tsai T, Kats M, Yang JJ. Peptide analogs from E-cadherin with different calcium-binding affinities. The Journal of Peptide Research : Official Journal of the American Peptide Society. 55: 203-15. PMID 10727102 DOI: 10.1034/J.1399-3011.2000.00169.X |
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