Vanathi Gopalakrishnan - Publications

Affiliations: 
Biomedical Informatics University of Pittsburgh, Pittsburgh, PA, United States 
Website:
https://www.dbmi.pitt.edu/person/vanathi-gopalakrishnan-phd

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Balasubramanian JB, Boes RD, Gopalakrishnan V. A novel approach to modeling multifactorial diseases using Ensemble Bayesian Rule Classifiers. Journal of Biomedical Informatics. 103455. PMID 32497685 DOI: 10.1016/J.Jbi.2020.103455  0.324
2018 Balasubramanian JB, Gopalakrishnan V. Tunable structure priors for Bayesian rule learning for knowledge integrated biomarker discovery. World Journal of Clinical Oncology. 9: 98-109. PMID 30254965 DOI: 10.5306/Wjco.V9.I5.98  0.303
2015 Ogoe HA, Visweswaran S, Lu X, Gopalakrishnan V. Knowledge transfer via classification rules using functional mapping for integrative modeling of gene expression data. Bmc Bioinformatics. 16: 226. PMID 26202217 DOI: 10.1186/S12859-015-0643-8  0.335
2011 Li X, LeBlanc J, Truong A, Vuthoori R, Chen SS, Lustgarten JL, Roth B, Allard J, Ippoliti A, Presley LL, Borneman J, Bigbee WL, Gopalakrishnan V, Graeber TG, Elashoff D, et al. A metaproteomic approach to study human-microbial ecosystems at the mucosal luminal interface. Plos One. 6: e26542. PMID 22132074 DOI: 10.1371/Journal.Pone.0026542  0.318
2011 Ganchev P, Malehorn D, Bigbee WL, Gopalakrishnan V. Transfer learning of classification rules for biomarker discovery and verification from molecular profiling studies. Journal of Biomedical Informatics. 44: S17-23. PMID 21571094 DOI: 10.1016/J.Jbi.2011.04.009  0.323
2010 Gopalakrishnan V, Lustgarten JL, Visweswaran S, Cooper GF. Bayesian rule learning for biomedical data mining. Bioinformatics (Oxford, England). 26: 668-75. PMID 20080512 DOI: 10.1093/Bioinformatics/Btq005  0.352
2010 Zeng X, Hood BL, Zhao T, Conrads TP, Sun M, Day RS, Gopalakrishnan V, Grover H, Weissfeld JL, Siegfried JM, Bigbee WL. Abstract 4564: Lung cancer serum biomarker discovery using label free LC-MS/MS Cancer Research. 70: 4564-4564. DOI: 10.1158/1538-7445.Am10-4564  0.308
2009 Lustgarten JL, Visweswaran S, Bowser RP, Hogan WR, Gopalakrishnan V. Knowledge-based variable selection for learning rules from proteomic data. Bmc Bioinformatics. 10: S16. PMID 19761570 DOI: 10.1186/1471-2105-10-S9-S16  0.36
2009 Liu Y, Carbonell J, Gopalakrishnan V, Weigele P. Conditional graphical models for protein structural motif recognition. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 639-57. PMID 19432536 DOI: 10.1089/Cmb.2008.0176  0.332
2006 Liu Y, Carbonell J, Weigele P, Gopalakrishnan V. Protein fold recognition using segmentation conditional random fields (SCRFs). Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 394-406. PMID 16597248 DOI: 10.1089/Cmb.2006.13.394  0.329
2004 Gopalakrishnan V, Livingston G, Hennessy D, Buchanan B, Rosenberg JM. Machine-learning techniques for macromolecular crystallization data. Acta Crystallographica. Section D, Biological Crystallography. 60: 1705-16. PMID 15388916 DOI: 10.1107/S090744490401683X  0.593
2004 Lu X, Zhai C, Gopalakrishnan V, Buchanan BG. Automatic annotation of protein motif function with Gene Ontology terms. Bmc Bioinformatics. 5: 122. PMID 15345032 DOI: 10.1186/1471-2105-5-122  0.55
2004 Liu Y, Carbonell J, Klein-Seetharaman J, Gopalakrishnan V. Comparison of probabilistic combination methods for protein secondary structure prediction. Bioinformatics (Oxford, England). 20: 3099-107. PMID 15217817 DOI: 10.1093/Bioinformatics/Bth370  0.328
2002 Gopalakrishnan V, Buchanan BG, Rosenberg J. A simple simulator of protein crystallization Journal of Applied Crystallography. 35: 727-733. DOI: 10.1107/S0021889802013675  0.592
2000 Gopalakrishnan V, Buchanan BG, Rosenberg JM. Intelligent aids for parallel experiment planning and macromolecular crystallization. Proceedings / ... International Conference On Intelligent Systems For Molecular Biology ; Ismb. International Conference On Intelligent Systems For Molecular Biology. 8: 171-82. PMID 10977078  0.563
1994 Hennessy D, Gopalakrishnan V, Buchanan BG, Rosenberg JM, Subramanian D. Induction of rules for biological macromolecule crystallization. Proceedings / ... International Conference On Intelligent Systems For Molecular Biology ; Ismb. International Conference On Intelligent Systems For Molecular Biology. 2: 179-87. PMID 7584388  0.569
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