| Year |
Citation |
Score |
| 2022 |
Shifat-E-Rabbi M, Zhuang Y, Li S, Rubaiyat AHM, Yin X, Rohde GK. Invariance encoding in sliced-Wasserstein space for image classification with limited training data. Pattern Recognition. 137. PMID 36713887 DOI: 10.1016/j.patcog.2022.109268 |
0.305 |
|
| 2021 |
Shifat-E-Rabbi M, Yin X, Rubaiyat AHM, Li S, Kolouri S, Aldroubi A, Nichols JM, Rohde GK. Radon Cumulative Distribution Transform Subspace Modeling for Image Classification. Journal of Mathematical Imaging and Vision. 63: 1185-1203. PMID 35464640 DOI: 10.1007/s10851-021-01052-0 |
0.376 |
|
| 2020 |
Kundu S, Ashinsky BG, Bouhrara M, Dam EB, Demehri S, Shifat-E-Rabbi M, Spencer RG, Urish KL, Rohde GK. Enabling early detection of osteoarthritis from presymptomatic cartilage texture maps via transport-based learning. Proceedings of the National Academy of Sciences of the United States of America. PMID 32958644 DOI: 10.1073/Pnas.1917405117 |
0.335 |
|
| 2020 |
Rubaiyat AHM, Hallam KM, Nichols JM, Hutchinson MN, Li S, Rohde GK. Parametric Signal Estimation Using the Cumulative Distribution Transform. Ieee Transactions On Signal Processing : a Publication of the Ieee Signal Processing Society. 68: 3312-3324. PMID 32733121 DOI: 10.1109/Tsp.2020.2997181 |
0.308 |
|
| 2020 |
Shifat-E-Rabbi M, Yin X, Fitzgerald CE, Rohde GK. Cell Image Classification: A Comparative Overview. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 32040260 DOI: 10.1002/Cyto.A.23984 |
0.465 |
|
| 2020 |
Zhuang Y, McDonald M, Uribe O, Yin X, Parikh D, Southerland AM, Rohde G. Facial Weakness Analysis and Quantification Of Static Images. Ieee Journal of Biomedical and Health Informatics. PMID 31944968 DOI: 10.1109/Jbhi.2020.2964520 |
0.449 |
|
| 2019 |
Yang M, Hu J, Li C, Rohde G, Du Y, Hu K. An In-Depth Survey of Underwater Image Enhancement and Restoration Ieee Access. 7: 123638-123657. DOI: 10.1109/Access.2019.2932611 |
0.475 |
|
| 2018 |
Corliss BA, Mathews C, Doty R, Rohde G, Peirce SM. Methods to label, image, and analyze the complex structural architectures of microvascular networks. Microcirculation (New York, N.Y. : 1994). e12520. PMID 30548558 DOI: 10.1111/Micc.12520 |
0.336 |
|
| 2018 |
Qi Q, Li Y, Wang J, Zheng H, Huang Y, Ding X, Rohde G. Label-efficient Breast Cancer Histopathological Image Classification. Ieee Journal of Biomedical and Health Informatics. PMID 30530374 DOI: 10.1109/Jbhi.2018.2885134 |
0.398 |
|
| 2018 |
Liu C, Huang Y, Ozolek JA, Hanna M, Singh R, Rohde G. SetSVM: An Approach to Set Classification in Nuclei-based Cancer Detection. Ieee Journal of Biomedical and Health Informatics. PMID 29994380 DOI: 10.1109/Jbhi.2018.2803793 |
0.304 |
|
| 2018 |
Nichols JM, Emerson TH, Cattell L, Park S, Kanaev A, Bucholtz F, Watnik A, Doster T, Rohde GK. Transport-based model for turbulence-corrupted imagery. Applied Optics. 57: 4524-4536. PMID 29877400 DOI: 10.1364/Ao.57.004524 |
0.316 |
|
| 2018 |
Park SR, Cattell L, Nichols JM, Watnik A, Doster T, Rohde GK. De-multiplexing vortex modes in optical communications using transport-based pattern recognition. Optics Express. 26: 4004-4022. PMID 29475257 DOI: 10.1364/Oe.26.004004 |
0.357 |
|
| 2017 |
Thorpe M, Park S, Kolouri S, Rohde GK, Slepčev D. A Transportation Distance for Signal Analysis. Journal of Mathematical Imaging and Vision. 59: 187-210. PMID 30233108 DOI: 10.1007/S10851-017-0726-4 |
0.345 |
|
| 2017 |
Kolouri S, Park S, Thorpe M, Slepčev D, Rohde GK. Optimal Mass Transport: Signal processing and machine-learning applications. Ieee Signal Processing Magazine. 34: 43-59. PMID 29962824 DOI: 10.1109/Msp.2017.2695801 |
0.368 |
|
| 2017 |
Kundu S, Kolouri S, Erickson KI, Kramer AF, McAuley E, Rohde GK. Discovery and visualization of structural biomarkers from MRI using transport-based morphometry. Neuroimage. PMID 29117580 DOI: 10.1016/J.Neuroimage.2017.11.006 |
0.404 |
|
| 2017 |
Pantanowitz L, Liu C, Huang Y, Guo H, Rohde GK. Impact of Altering Various Image Parameters on Human Epidermal Growth Factor Receptor 2 Image Analysis Data Quality. Journal of Pathology Informatics. 8: 39. PMID 28966838 DOI: 10.4103/Jpi.Jpi_46_17 |
0.414 |
|
| 2017 |
Huang Y, Zheng H, Liu C, Ding X, Rohde G. Epithelium-stroma classification via convolutional neural networks and unsupervised domain adaptation in histopathological images. Ieee Journal of Biomedical and Health Informatics. PMID 28410112 DOI: 10.1109/Jbhi.2017.2691738 |
0.398 |
|
| 2017 |
Nketia T, Sailem H, Rohde G, Machiraju R, Rittscher J. Analysis of Live Cell Images: Methods, Tools and Opportunities. Methods (San Diego, Calif.). PMID 28242295 DOI: 10.1016/J.Ymeth.2017.02.007 |
0.461 |
|
| 2017 |
Park SR, Kolouri S, Kundu S, Rohde GK. The cumulative distribution transform and linear pattern classification Applied and Computational Harmonic Analysis. 45: 616-641. DOI: 10.1016/J.Acha.2017.02.002 |
0.304 |
|
| 2016 |
Liu C, Shang F, Ozolek JA, Rohde GK. Detecting and segmenting cell nuclei in two-dimensional microscopy images. Journal of Pathology Informatics. 7: 42. PMID 28066682 DOI: 10.4103/2153-3539.192810 |
0.412 |
|
| 2016 |
Huang Y, Liu C, Eisses JF, Husain SZ, Rohde GK. A supervised learning framework for pancreatic islet segmentation with multi-scale color-texture features and rolling guidance filters. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 27560544 DOI: 10.1002/Cyto.A.22929 |
0.441 |
|
| 2016 |
Kolouri S, Tosun AB, Ozolek JA, Rohde GK. A continuous linear optimal transport approach for pattern analysis in image datasets. Pattern Recognition. 51: 453-462. PMID 26858466 DOI: 10.1016/J.Patcog.2015.09.019 |
0.485 |
|
| 2015 |
Kolouri S, Park S, Rohde G. The Radon cumulative distribution transform and its application to image classification. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. PMID 26685245 DOI: 10.1109/Tip.2015.2509419 |
0.421 |
|
| 2015 |
Johnson GR, Li J, Shariff A, Rohde GK, Murphy RF. Automated Learning of Subcellular Variation among Punctate Protein Patterns and a Generative Model of Their Relation to Microtubules. Plos Computational Biology. 11: e1004614. PMID 26624011 DOI: 10.1371/Journal.Pcbi.1004614 |
0.385 |
|
| 2015 |
Basu S, Chi Liu, Rohde GK. Extraction of Individual Filaments from 2D Confocal Microscopy Images of Flat Cells. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 632-43. PMID 26357274 DOI: 10.1109/Tcbb.2014.2372783 |
0.44 |
|
| 2015 |
Johnson GR, Buck TE, Sullivan DP, Rohde GK, Murphy RF. Joint modeling of cell and nuclear shape variation. Molecular Biology of the Cell. 26: 4046-56. PMID 26354424 DOI: 10.1091/Mbc.E15-06-0370 |
0.338 |
|
| 2015 |
Bonfield CM, Foley LM, Kundu S, Fellows-Mayle W, Hitchens TK, Rohde GK, Grandhi R, Mooney MP. The influence of surgical correction on white matter microstructural integrity in rabbits with familial coronal suture craniosynostosis. Neurosurgical Focus. 38: E3. PMID 25929965 DOI: 10.3171/2015.2.Focus14849 |
0.321 |
|
| 2015 |
Rohde GK. Computational analysis of cell images. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 87: 294-5. PMID 25808302 DOI: 10.1002/Cyto.A.22653 |
0.368 |
|
| 2015 |
Tosun AB, Yergiyev O, Kolouri S, Silverman JF, Rohde GK. Detection of malignant mesothelioma using nuclear structure of mesothelial cells in effusion cytology specimens. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 87: 326-33. PMID 25598227 DOI: 10.1002/Cyto.A.22602 |
0.374 |
|
| 2015 |
Basu S, Liu C, Rohde GK. Localizing and extracting filament distributions from microscopy images. Journal of Microscopy. 258: 13-23. PMID 25556529 DOI: 10.1111/Jmi.12209 |
0.451 |
|
| 2015 |
Rohde GK. New methods for quantifying and visualizing information from images of cells: An overview. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2013: 121-4. PMID 24109639 DOI: 10.1109/EMBC.2013.6609452 |
0.305 |
|
| 2015 |
Rohde GK. New methods for quantifying and visualizing information from images of cells: An overview. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2013: 121-4. PMID 24109639 DOI: 10.1109/EMBC.2013.6609452 |
0.305 |
|
| 2015 |
Kolouri S, Rohde GK. Transport-based single frame super resolution of very low resolution face images Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 7: 4876-4884. DOI: 10.1109/CVPR.2015.7299121 |
0.316 |
|
| 2015 |
Li Y, Chen H, Rohde GK, Yao C, Cheng L. Texton analysis for mass classification in mammograms Pattern Recognition Letters. 52: 87-93. DOI: 10.1016/J.Patrec.2014.10.008 |
0.323 |
|
| 2014 |
Eisses JF, Davis AW, Tosun AB, Dionise ZR, Chen C, Ozolek JA, Rohde GK, Husain SZ. A computer-based automated algorithm for assessing acinar cell loss after experimental pancreatitis. Plos One. 9: e110220. PMID 25343460 DOI: 10.1016/J.Pan.2014.05.433 |
0.322 |
|
| 2014 |
Rohde GK, Ozolek JA, Parwani AV, Pantanowitz L. Carnegie Mellon University bioimaging day 2014: Challenges and opportunities in digital pathology. Journal of Pathology Informatics. 5: 32. PMID 25250190 DOI: 10.4103/2153-3539.139712 |
0.42 |
|
| 2014 |
Huang H, Tosun AB, Guo J, Chen C, Wang W, Ozolek JA, Rohde GK. Cancer diagnosis by nuclear morphometry using spatial information (.) Pattern Recognition Letters. 42: 115-121. PMID 24910485 DOI: 10.1016/J.Patrec.2014.02.008 |
0.371 |
|
| 2014 |
Basu S, Kolouri S, Rohde GK. Detecting and visualizing cell phenotype differences from microscopy images using transport-based morphometry. Proceedings of the National Academy of Sciences of the United States of America. 111: 3448-53. PMID 24550445 DOI: 10.1073/Pnas.1319779111 |
0.433 |
|
| 2014 |
Tosun AB, Yergiyev O, Kolouri S, Silverman JF, Rohde GK. Novel computer-aided diagnosis of mesothelioma using nuclear structure of mesothelial cells in effusion cytology specimens Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9041. DOI: 10.1117/12.2043320 |
0.393 |
|
| 2014 |
Kolouri S, Rohde GK. Quantifying and visualizing variations in sets of images using continuous linear optimal transport Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9034. DOI: 10.1117/12.2043296 |
0.484 |
|
| 2014 |
Kolouri S, Basu S, Rohde GK. Learning and visualizing statistical relationships between protein distributions from microscopy images 2014 Ieee 11th International Symposium On Biomedical Imaging, Isbi 2014. 381-384. |
0.3 |
|
| 2013 |
Wang W, Slepčev D, Basu S, Ozolek JA, Rohde GK. A linear optimal transportation framework for quantifying and visualizing variations in sets of images. International Journal of Computer Vision. 101: 254-269. PMID 23729991 DOI: 10.1007/S11263-012-0566-Z |
0.459 |
|
| 2013 |
Chen C, Wang W, Ozolek JA, Rohde GK. A flexible and robust approach for segmenting cell nuclei from 2D microscopy images using supervised learning and template matching. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 83: 495-507. PMID 23568787 DOI: 10.1002/Cyto.A.22280 |
0.499 |
|
| 2013 |
Basu S, Dahl KN, Rohde GK. Localizing and extracting filament distributions from microscopy images. Journal of Microscopy. 250: 57-67. PMID 23458491 DOI: 10.1111/Jmi.12018 |
0.426 |
|
| 2013 |
Guo J, Huang H, Chen C, Rohde GK. Optimized nonlinear discriminant analysis (ONDA) for supervised pixel classification Ieee Signal Processing Letters. 20: 1155-1158. DOI: 10.1109/Lsp.2013.2278976 |
0.315 |
|
| 2012 |
Li J, Shariff A, Wiking M, Lundberg E, Rohde GK, Murphy RF. Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines. Plos One. 7: e50292. PMID 23209697 DOI: 10.1371/Journal.Pone.0050292 |
0.323 |
|
| 2012 |
Buck TE, Li J, Rohde GK, Murphy RF. Toward the virtual cell: automated approaches to building models of subcellular organization "learned" from microscopy images. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 791-9. PMID 22777818 DOI: 10.1002/Bies.201200032 |
0.458 |
|
| 2012 |
Chen C, Wang W, Ozolek JA, Lages N, Altschuler SJ, Wu LF, Rohde GK. A template matching approach for segmenting microscopy images Proceedings - International Symposium On Biomedical Imaging. 768-771. DOI: 10.1109/ISBI.2012.6235661 |
0.356 |
|
| 2012 |
Rohde GK, Wang W, Basu S, Slepcev D. A linear transport-based embedding method for analyzing biomedical images Conference Record - Asilomar Conference On Signals, Systems and Computers. 1593-1596. DOI: 10.1109/ACSSC.2012.6489298 |
0.39 |
|
| 2011 |
Wang W, Mo Y, Ozolek JA, Rohde GK. Penalized Fisher Discriminant Analysis and Its Application to Image-Based Morphometry. Pattern Recognition Letters. 32: 2128-2135. PMID 22140290 DOI: 10.1016/J.Patrec.2011.08.010 |
0.438 |
|
| 2011 |
Choi S, Wang W, Ribeiro AJ, Kalinowski A, Gregg SQ, Opresko PL, Niedernhofer LJ, Rohde GK, Dahl KN. Computational image analysis of nuclear morphology associated with various nuclear-specific aging disorders. Nucleus (Austin, Tex.). 2: 570-9. PMID 22127259 DOI: 10.4161/Nucl.2.6.17798 |
0.375 |
|
| 2011 |
Chen C, Ozolek JA, Wang W, Rohde GK. A general system for automatic biomedical image segmentation using intensity neighborhoods. International Journal of Biomedical Imaging. 2011: 606857. PMID 21760767 DOI: 10.1155/2011/606857 |
0.457 |
|
| 2011 |
Wang W, Ozolek JA, Slepčev D, Lee AB, Chen C, Rohde GK. An optimal transportation approach for nuclear structure-based pathology. Ieee Transactions On Medical Imaging. 30: 621-31. PMID 20977984 DOI: 10.1109/Tmi.2010.2089693 |
0.404 |
|
| 2011 |
Chen C, Ozolek JA, Wang W, Rohde GK. A pixel classification system for segmenting biomedical images using intensity neighborhoods and dimension reduction Proceedings - International Symposium On Biomedical Imaging. 1649-1652. DOI: 10.1109/ISBI.2011.5872720 |
0.35 |
|
| 2011 |
Wang W, Mo Y, Ozolek JA, Rohde GK. Characterizing morphology differences from image data using a modified fisher criterion Proceedings - International Symposium On Biomedical Imaging. 129-132. DOI: 10.1109/ISBI.2011.5872371 |
0.353 |
|
| 2010 |
Shariff A, Murphy RF, Rohde GK. A generative model of microtubule distributions, and indirect estimation of its parameters from fluorescence microscopy images. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 457-66. PMID 20104579 DOI: 10.1002/Cyto.A.20854 |
0.445 |
|
| 2010 |
Wang W, Ozolek JA, Rohde GK. Detection and classification of thyroid follicular lesions based on nuclear structure from histopathology images. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 485-94. PMID 20099247 DOI: 10.1002/Cyto.A.20853 |
0.394 |
|
| 2010 |
Wang W, Chen C, Peng T, Slepčev D, Ozolek JA, Rohde GK. A graph-based method for detecting characteristic phenotypes from biomedical images 2010 7th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Isbi 2010 - Proceedings. 129-132. DOI: 10.1109/ISBI.2010.5490396 |
0.314 |
|
| 2010 |
Rohde GK, Wang W, Slepcev D, Lee AB, Chen C, Ozolek JA. Detecting and classifying cancers from image data using optimal transportation Ifmbe Proceedings. 32: 353-356. DOI: 10.1007/978-3-642-14998-6_90 |
0.319 |
|
| 2009 |
Rohde GK, Aldroubi A, Healy DM. Interpolation artifacts in sub-pixel image registration. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 18: 333-45. PMID 19116201 DOI: 10.1109/Tip.2008.2008081 |
0.485 |
|
| 2008 |
Rohde GK, Ribeiro AJ, Dahl KN, Murphy RF. Deformation-based nuclear morphometry: capturing nuclear shape variation in HeLa cells. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 73: 341-50. PMID 18163487 DOI: 10.1002/Cyto.A.20506 |
0.392 |
|
| 2008 |
Rohde GK, Nichols JM, Dissinger BM, Bucholtz F. Stochastic analysis of recurrence plots with applications to the detection of deterministic signals Physica D: Nonlinear Phenomena. 237: 619-629. DOI: 10.1016/J.Physd.2007.10.008 |
0.305 |
|
| 2007 |
Rohde GK, Healy DM, Berenstein CA, Aldroubi A. Interpolation artifacts in biomedical image registration 2007 4th Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 648-651. DOI: 10.1109/ISBI.2007.356935 |
0.57 |
|
| 2007 |
Healy DM, Rohde GK. Fast global image registration using random projections 2007 4th Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 476-479. DOI: 10.1109/ISBI.2007.356892 |
0.323 |
|
| 2006 |
Marenco S, Rawlings R, Rohde GK, Barnett AS, Honea RA, Pierpaoli C, Weinberger DR. Regional distribution of measurement error in diffusion tensor imaging. Psychiatry Research. 147: 69-78. PMID 16797169 DOI: 10.1016/J.Pscychresns.2006.01.008 |
0.37 |
|
| 2006 |
Rohde GK, Healy DM, Berenstein CA, Aldroubi A, Rockmore D. Stochastic analysis of geometric image processing using B-splines Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. 5: V1017-V1020. |
0.61 |
|
| 2006 |
Rohde GK, Healy DM, Berenstein CA, Aldroubi A. Measuring image similarity to sub-pixel accuracy 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 638-641. |
0.638 |
|
| 2005 |
Rohde GK, Barnett AS, Basser PJ, Pierpaoli C. Estimating intensity variance due to noise in registered images: applications to diffusion tensor MRI. Neuroimage. 26: 673-84. PMID 15955477 DOI: 10.1016/J.Neuroimage.2005.02.023 |
0.465 |
|
| 2005 |
Rohde GK, Dawant BM, Lin SF. Correction of motion artifact in cardiac optical mapping using image registration. Ieee Transactions On Bio-Medical Engineering. 52: 338-41. PMID 15709673 DOI: 10.1109/Tbme.2004.840464 |
0.393 |
|
| 2005 |
Rohde GK, Berenstein CA, Healy DM. Measuring image similarity in the presence of noise Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5747: 132-143. DOI: 10.1117/12.594964 |
0.632 |
|
| 2004 |
Rohde GK, Barnett AS, Basser PJ, Marenco S, Pierpaoli C. Comprehensive Approach for Correction of Motion and Distortion in Diffusion-Weighted MRI Magnetic Resonance in Medicine. 51: 103-114. PMID 14705050 DOI: 10.1002/Mrm.10677 |
0.435 |
|
| 2003 |
Rohde GK, Aldroubi A, Dawant BM. The adaptive bases algorithm for intensity-based nonrigid image registration. Ieee Transactions On Medical Imaging. 22: 1470-9. PMID 14606680 DOI: 10.1109/Tmi.2003.819299 |
0.463 |
|
| 2002 |
Rohde GK, Aldroubi A, Dawant BM. The adaptive bases algorithm for nonrigid image registration Proceedings of Spie - the International Society For Optical Engineering. 4684: 933-944. DOI: 10.1117/12.467046 |
0.304 |
|
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