Nicholas F. Parrish, Ph.D. - Publications

Affiliations: 
2013 Cell and Molecular Biology University of Pennsylvania, Philadelphia, PA, United States 
Area:
Virology Biology, Molecular Biology

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kaneko Y, Naito Y, Koide R, Parrish NF, Takahashi T. The regulation of persistent Borna disease virus infection by RNA silencing factors in human cells. Biochemical and Biophysical Research Communications. 658: 122-127. PMID 37030066 DOI: 10.1016/j.bbrc.2023.03.069  0.306
2021 Kojima S, Kamada AJ, Parrish NF. Virus-derived variation in diverse human genomes. Plos Genetics. 17: e1009324. PMID 33901175 DOI: 10.1371/journal.pgen.1009324  0.345
2021 Kojima S, Yoshikawa K, Ito J, Nakagawa S, Parrish NF, Horie M, Kawano S, Tomonaga K. Virus-like insertions with sequence signatures similar to those of endogenous nonretroviral RNA viruses in the human genome. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33495343 DOI: 10.1073/pnas.2010758118  0.323
2018 Joas S, Parrish EH, Gnanadurai CW, Lump E, Stürzel CM, Parrish NF, Learn GH, Sauermann U, Neumann B, Rensing KM, Fuchs D, Billingsley JM, Bosinger SE, Silvestri G, Apetrei C, et al. Species-specific host factors rather than virus-intrinsic virulence determine primate lentiviral pathogenicity. Nature Communications. 9: 1371. PMID 29636452 DOI: 10.1038/S41467-018-03762-3  0.599
2016 Parrish NF, Tomonaga K. Endogenized viral sequences in mammals. Current Opinion in Microbiology. 31: 176-183. PMID 27128186 DOI: 10.1016/J.Mib.2016.03.002  0.364
2016 Zurnic I, Hütter S, Lehmann U, Stanke N, Reh J, Kern T, Lindel F, Gerresheim G, Hamann M, Müllers E, Lesbats P, Cherepanov P, Serrao E, Engelman A, Lindemann D, ... ... Parrish NF, et al. Proceedings of the Frontiers of Retrovirology Conference 2016 Retrovirology. 13. DOI: 10.1186/S12977-016-0294-5  0.38
2015 Sofuku K, Parrish NF, Honda T, Tomonaga K. Transcription Profiling Demonstrates Epigenetic Control of Non-retroviral RNA Virus-Derived Elements in the Human Genome. Cell Reports. PMID 26321645 DOI: 10.1016/J.Celrep.2015.08.007  0.348
2015 Parrish NF, Fujino K, Shiromoto Y, Iwasaki YW, Ha H, Xing J, Makino A, Kuramochi-Miyagawa S, Nakano T, Siomi H, Honda T, Tomonaga K. piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals. Rna (New York, N.Y.). PMID 26283688 DOI: 10.1261/Rna.052092.115  0.35
2015 Barbian HJ, Decker JM, Bibollet-Ruche F, Galimidi RP, West AP, Learn GH, Parrish NF, Iyer SS, Li Y, Pace CS, Song R, Huang Y, Denny TN, Mouquet H, Martin L, et al. Neutralization properties of simian immunodeficiency viruses infecting chimpanzees and gorillas. Mbio. 6. PMID 25900654 DOI: 10.1128/Mbio.00296-15  0.589
2015 Makino A, Fujino K, Parrish NF, Honda T, Tomonaga K. Borna disease virus possesses an NF-ĸB inhibitory sequence in the nucleoprotein gene. Scientific Reports. 5: 8696. PMID 25733193 DOI: 10.1038/Srep08696  0.341
2013 Wojcechowskyj JA, Didigu CA, Lee JY, Parrish NF, Sinha R, Hahn BH, Bushman FD, Jensen ST, Seeholzer SH, Doms RW. Quantitative phosphoproteomics reveals extensive cellular reprogramming during HIV-1 entry. Cell Host & Microbe. 13: 613-23. PMID 23684312 DOI: 10.1016/J.Chom.2013.04.011  0.598
2013 Parrish NF, Gao F, Li H, Giorgi EE, Barbian HJ, Parrish EH, Zajic L, Iyer SS, Decker JM, Kumar A, Hora B, Berg A, Cai F, Hopper J, Denny TN, et al. Phenotypic properties of transmitted founder HIV-1. Proceedings of the National Academy of Sciences of the United States of America. 110: 6626-33. PMID 23542380 DOI: 10.1073/Pnas.1304288110  0.628
2013 Parker ZF, Iyer SS, Wilen CB, Parrish NF, Chikere KC, Lee FH, Didigu CA, Berro R, Klasse PJ, Lee B, Moore JP, Shaw GM, Hahn BH, Doms RW. Transmitted/founder and chronic HIV-1 envelope proteins are distinguished by differential utilization of CCR5. Journal of Virology. 87: 2401-11. PMID 23269796 DOI: 10.1128/Jvi.02964-12  0.608
2013 Baalwa J, Wang S, Parrish NF, Decker JM, Keele BF, Learn GH, Yue L, Ruzagira E, Ssemwanga D, Kamali A, Amornkul PN, Price MA, Kappes JC, Karita E, Kaleebu P, et al. Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones. Virology. 436: 33-48. PMID 23123038 DOI: 10.1016/J.Virol.2012.10.009  0.596
2013 Parrish NF, Li H, Hora B, Berg A, Wilen CB, Decker J, Iyer SS, Zajic L, O’Brien M, Salazar-Gonzalez JF, Salazar MG, Parrish EH, Ding H, Kumar A, Ochsenbauer C, et al. C106 Distinguishing Features of Transmitted/Founder HIV-1 Jaids Journal of Acquired Immune Deficiency Syndromes. 62: S45. DOI: 10.1097/01.Qai.0000429225.92253.36  0.516
2012 Parrish NF, Wilen CB, Banks LB, Iyer SS, Pfaff JM, Salazar-Gonzalez JF, Salazar MG, Decker JM, Parrish EH, Berg A, Hopper J, Hora B, Kumar A, Mahlokozera T, Yuan S, et al. Transmitted/founder and chronic subtype C HIV-1 use CD4 and CCR5 receptors with equal efficiency and are not inhibited by blocking the integrin α4β7 Plos Pathogens. 8. PMID 22693444 DOI: 10.1371/Journal.Ppat.1002686  0.642
2012 Pandrea I, Parrish NF, Raehtz K, Gaufin T, Barbian HJ, Ma D, Kristoff J, Gautam R, Zhong F, Haret-Richter GS, Trichel A, Shaw GM, Hahn BH, Apetrei C. Mucosal simian immunodeficiency virus transmission in African green monkeys: susceptibility to infection is proportional to target cell availability at mucosal sites. Journal of Virology. 86: 4158-68. PMID 22318138 DOI: 10.1128/Jvi.07141-11  0.561
2011 Jiang C, Parrish NF, Wilen CB, Li H, Chen Y, Pavlicek JW, Berg A, Lu X, Song H, Tilton JC, Pfaff JM, Henning EA, Decker JM, Moody MA, Drinker MS, et al. Primary infection by a human immunodeficiency virus with atypical coreceptor tropism. Journal of Virology. 85: 10669-81. PMID 21835785 DOI: 10.1128/Jvi.05249-11  0.632
2011 Wilen CB, Parrish NF, Pfaff JM, Decker JM, Henning EA, Haim H, Petersen JE, Wojcechowskyj JA, Sodroski J, Haynes BF, Montefiori DC, Tilton JC, Shaw GM, Hahn BH, Doms RW. Phenotypic and immunologic comparison of clade B transmitted/founder and chronic HIV-1 envelope glycoproteins. Journal of Virology. 85: 8514-27. PMID 21715507 DOI: 10.1128/Jvi.00736-11  0.618
2010 Gnanadurai CW, Pandrea I, Parrish NF, Kraus MH, Learn GH, Salazar MG, Sauermann U, Töpfer K, Gautam R, Münch J, Stahl-Hennig C, Apetrei C, Hahn BH, Kirchhoff F. Genetic identity and biological phenotype of a transmitted/founder virus representative of nonpathogenic simian immunodeficiency virus infection in African green monkeys. Journal of Virology. 84: 12245-54. PMID 20881048 DOI: 10.1128/Jvi.01603-10  0.609
2010 Kraus MH, Parrish NF, Shaw KS, Decker JM, Keele BF, Salazar-Gonzalez JF, Grayson T, McPherson DT, Ping LH, Anderson JA, Swanstrom R, Williamson C, Shaw GM, Hahn BH. A rev1-vpu polymorphism unique to HIV-1 subtype A and C strains impairs envelope glycoprotein expression from rev-vpu-env cassettes and reduces virion infectivity in pseudotyping assays. Virology. 397: 346-57. PMID 20003995 DOI: 10.1016/J.Virol.2009.11.019  0.568
2009 Salazar-Gonzalez JF, Salazar MG, Keele BF, Learn GH, Giorgi EE, Li H, Decker JM, Wang S, Baalwa J, Kraus MH, Parrish NF, Shaw KS, Guffey MB, Bar KJ, Davis KL, et al. Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection. The Journal of Experimental Medicine. 206: 1273-89. PMID 19487424 DOI: 10.1084/Jem.20090378  0.652
Show low-probability matches.