| Year |
Citation |
Score |
| 2024 |
Cantó-Pastor A, Kajala K, Shaar-Moshe L, Manzano C, Timilsena P, De Bellis D, Gray S, Holbein J, Yang H, Mohammad S, Nirmal N, Suresh K, Ursache R, Mason GA, Gouran M, ... ... Sinha N, et al. A suberized exodermis is required for tomato drought tolerance. Nature Plants. PMID 38168610 DOI: 10.1038/s41477-023-01567-x |
0.64 |
|
| 2023 |
Jhu MY, Ellison EE, Sinha NR. CRISPR gene editing to improve crop resistance to parasitic plants. Frontiers in Genome Editing. 5: 1289416. PMID 37965302 DOI: 10.3389/fgeed.2023.1289416 |
0.354 |
|
| 2023 |
Li S, Nakayama H, Sinha NR. How to utilize comparative transcriptomics to dissect morphological diversity in plants. Current Opinion in Plant Biology. 76: 102474. PMID 37804608 DOI: 10.1016/j.pbi.2023.102474 |
0.808 |
|
| 2022 |
Jhu MY, Sinha NR. species: Model organisms for haustorium development in stem holoparasitic plants. Frontiers in Plant Science. 13: 1086384. PMID 36578337 DOI: 10.3389/fpls.2022.1086384 |
0.352 |
|
| 2022 |
Cerca J, Petersen B, Lazaro-Guevara JM, Rivera-Colón A, Birkeland S, Vizueta J, Li S, Li Q, Loureiro J, Kosawang C, Díaz PJ, Rivas-Torres G, Fernández-Mazuecos M, Vargas P, McCauley RA, ... ... Sinha NR, et al. The genomic basis of the plant island syndrome in Darwin's giant daisies. Nature Communications. 13: 3729. PMID 35764640 DOI: 10.1038/s41467-022-31280-w |
0.565 |
|
| 2022 |
Reynoso MA, Borowsky AT, Pauluzzi GC, Yeung E, Zhang J, Formentin E, Velasco J, Cabanlit S, Duvenjian C, Prior MJ, Akmakjian GZ, Deal RB, Sinha NR, Brady SM, Girke T, et al. Gene regulatory networks shape developmental plasticity of root cell types under water extremes in rice. Developmental Cell. 57: 1177-1192.e6. PMID 35504287 DOI: 10.1016/j.devcel.2022.04.013 |
0.619 |
|
| 2022 |
Nakayama H, Leichty AR, Sinha NR. Molecular mechanisms underlying leaf development, morphological diversification, and beyond. The Plant Cell. PMID 35441681 DOI: 10.1093/plcell/koac118 |
0.744 |
|
| 2022 |
Jhu MY, Sinha NR. Parasitic Plants: An Overview of Mechanisms by Which Plants Perceive and Respond to Parasites. Annual Review of Plant Biology. 73: 433-455. PMID 35363532 DOI: 10.1146/annurev-arplant-102820-100635 |
0.316 |
|
| 2022 |
Jhu MY, Farhi M, Wang L, Zumstein K, Sinha NR. Investigating Host and Parasitic Plant Interaction by Tissue-Specific Gene Analyses on Tomato and Interface at Three Haustorial Developmental Stages. Frontiers in Plant Science. 12: 764843. PMID 35222447 DOI: 10.3389/fpls.2021.764843 |
0.324 |
|
| 2022 |
Jhu MY, Farhi M, Wang L, Philbrook RN, Belcher MS, Nakayama H, Zumstein KS, Rowland SD, Ron M, Shih PM, Sinha NR. Heinz resistant tomato cultivars exhibit a lignin-based resistance to field dodder (Cuscuta campestris) parasitism. Plant Physiology. PMID 35099559 DOI: 10.1093/plphys/kiac024 |
0.718 |
|
| 2021 |
Sinha NR. Neelima Roy Sinha. Current Biology : Cb. 31: R1507-R1509. PMID 34875234 DOI: 10.1016/j.cub.2021.11.014 |
0.32 |
|
| 2021 |
Jhu MY, Ichihashi Y, Farhi M, Wong C, Sinha NR. LATERAL ORGAN BOUNDARIES DOMAIN 25 functions as a key regulator of haustorium development in dodders. Plant Physiology. 186: 2093-2110. PMID 34618110 DOI: 10.1093/plphys/kiab231 |
0.707 |
|
| 2021 |
Kajala K, Gouran M, Shaar-Moshe L, Mason GA, Rodriguez-Medina J, Kawa D, Pauluzzi G, Reynoso M, Canto-Pastor A, Manzano C, Lau V, Artur MAS, West DA, Gray SB, Borowsky AT, ... ... Sinha NR, et al. Innovation, conservation, and repurposing of gene function in root cell type development. Cell. 184: 5070. PMID 34534466 DOI: 10.1016/j.cell.2021.08.032 |
0.6 |
|
| 2021 |
Nakayama H, Rowland SD, Cheng Z, Zumstein K, Kang J, Kondo Y, Sinha NR. Leaf form diversification in an ornamental heirloom tomato results from alterations in two different HOMEOBOX genes. Current Biology : Cb. PMID 34473947 DOI: 10.1016/j.cub.2021.08.023 |
0.793 |
|
| 2021 |
Cole B, Bergmann D, Blaby-Haas CE, Blaby IK, Bouchard KE, Brady SM, Ciobanu D, Coleman-Derr D, Leiboff S, Mortimer JC, Nobori T, Rhee SY, Schmutz J, Simmons BA, Singh AK, ... Sinha N, et al. Plant single-cell solutions for energy and the environment. Communications Biology. 4: 962. PMID 34385583 DOI: 10.1038/s42003-021-02477-4 |
0.303 |
|
| 2021 |
Kajala K, Gouran M, Shaar-Moshe L, Mason GA, Rodriguez-Medina J, Kawa D, Pauluzzi G, Reynoso M, Canto-Pastor A, Manzano C, Lau V, Artur MAS, West DA, Gray SB, Borowsky AT, ... ... Sinha NR, et al. Innovation, conservation, and repurposing of gene function in root cell type development. Cell. PMID 34010619 DOI: 10.1016/j.cell.2021.04.024 |
0.673 |
|
| 2020 |
Martinez CC, Li S, Woodhouse MR, Sugimoto K, Sinha NR. Spatial transcriptional signatures define margin morphogenesis along the proximal-distal and medio-lateral axes in tomato (Solanum lycopersicum) leaves. The Plant Cell. PMID 33710280 DOI: 10.1093/plcell/koaa012 |
0.619 |
|
| 2019 |
Rowland SD, Zumstein K, Nakayama H, Cheng Z, Flores AM, Chitwood DH, Maloof JN, Sinha NR. Leaf shape is a predictor of fruit quality and cultivar performance in tomato. The New Phytologist. PMID 31880321 DOI: 10.1111/Nph.16403 |
0.751 |
|
| 2019 |
Reynoso MA, Kajala K, Bajic M, West DA, Pauluzzi G, Yao AI, Hatch K, Zumstein K, Woodhouse M, Rodriguez-Medina J, Sinha N, Brady SM, Deal RB, Bailey-Serres J. Evolutionary flexibility in flooding response circuitry in angiosperms. Science (New York, N.Y.). 365: 1291-1295. PMID 31604238 DOI: 10.1126/Science.Aax8862 |
0.811 |
|
| 2019 |
Raja R, Slaughter DC, Fennimore SA, Nguyen TT, Vuong VL, Sinha N, Tourte L, Smith RF, Siemens MC. Crop signalling: A novel crop recognition technique for robotic weed control Biosystems Engineering. 187: 278-291. DOI: 10.1016/J.Biosystemseng.2019.09.011 |
0.387 |
|
| 2018 |
Reynoso MA, Pauluzzi GC, Cabanlit S, Velasco J, Bazin J, Deal R, Brady S, Sinha N, Bailey-Serres J, Kajala K. Isolation of Nuclei in Tagged Cell Types (INTACT), RNA Extraction and Ribosomal RNA Degradation to Prepare Material for RNA-Seq. Bio-Protocol. 8: e2458. PMID 34286007 DOI: 10.21769/BioProtoc.2458 |
0.527 |
|
| 2018 |
Ostria-Gallardo E, Ranjan A, Ichihashi Y, Corcuera LJ, Sinha NR. Decoding the gene coexpression network underlying the ability of Gevuina avellana to live in diverse light conditions. The New Phytologist. PMID 29956327 DOI: 10.1111/Nph.15278 |
0.692 |
|
| 2018 |
Sousa-Baena MS, Sinha NR, Hernandes-Lopes J, Lohmann LG. Convergent Evolution and the Diverse Ontogenetic Origins of Tendrils in Angiosperms. Frontiers in Plant Science. 9: 403. PMID 29666627 DOI: 10.3389/Fpls.2018.00403 |
0.416 |
|
| 2018 |
Sousa-Baena MS, Lohmann LG, Hernandes-Lopes J, Sinha NR. The molecular control of tendril development in angiosperms. The New Phytologist. PMID 29520789 DOI: 10.1111/Nph.15073 |
0.413 |
|
| 2018 |
Nakayama H, Sakamoto T, Okegawa Y, Kaminoyama K, Fujie M, Ichihashi Y, Kurata T, Motohashi K, Al-Shehbaz I, Sinha N, Kimura S. Comparative transcriptomics with self-organizing map reveals cryptic photosynthetic differences between two accessions of North American Lake cress. Scientific Reports. 8: 3302. PMID 29459626 DOI: 10.1038/S41598-018-21646-W |
0.804 |
|
| 2017 |
Maher KA, Bajic M, Kajala K, Reynoso M, Pauluzzi G, West D, Zumstein K, Woodhouse M, Bubb KL, Dorrity MW, Queitsch C, Bailey-Serres J, Sinha N, Brady SM, Deal R. Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules. The Plant Cell. PMID 29229750 DOI: 10.1105/Tpc.17.00581 |
0.831 |
|
| 2017 |
Nakayama H, Sinha NR, Kimura S. How Do Plants and Phytohormones Accomplish Heterophylly, Leaf Phenotypic Plasticity, in Response to Environmental Cues. Frontiers in Plant Science. 8: 1717. PMID 29046687 DOI: 10.3389/Fpls.2017.01717 |
0.831 |
|
| 2017 |
Reynoso M, Pauluzzi G, Kajala K, Cabanlit S, Velasco J, Bazin J, Deal R, Sinha N, Brady SM, Bailey-Serres J. Nuclear transcriptomes at high resolution using retooled INTACT. Plant Physiology. PMID 28956755 DOI: 10.1104/Pp.17.00688 |
0.614 |
|
| 2016 |
An CI, Ichihashi Y, Peng J, Sinha NR, Hagiwara N. Transcriptome Dynamics and Potential Roles of Sox6 in the Postnatal Heart. Plos One. 11: e0166574. PMID 27832192 DOI: 10.1371/Journal.Pone.0166574 |
0.67 |
|
| 2016 |
Martinez CC, Chitwood DH, Smith RS, Sinha NR. Left-right leaf asymmetry in decussate and distichous phyllotactic systems. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 27821524 DOI: 10.1098/Rstb.2015.0412 |
0.345 |
|
| 2016 |
Martinez CC, Koenig D, Chitwood DH, Sinha NR. A Sister of PIN1 gene in tomato (Solanum lycopersicum) defines leaf and flower organ initiation patterns by maintaining epidermal auxin flux. Developmental Biology. PMID 27554165 DOI: 10.1016/J.Ydbio.2016.08.011 |
0.754 |
|
| 2016 |
Fulop D, Ranjan A, Ofner I, Covington MF, Chitwood DH, West D, Ichihashi Y, Headland L, Zamir D, Maloof JN, Sinha NR. A New Advanced Backcross Tomato Population Enables High Resolution Leaf QTL Mapping and Gene Identification. G3 (Bethesda, Md.). PMID 27510891 DOI: 10.1534/G3.116.030536 |
0.636 |
|
| 2016 |
Sinha NR, Rowland SD, Ichihashi Y. Using gene networks in EvoDevo analyses. Current Opinion in Plant Biology. 33: 133-139. PMID 27455887 DOI: 10.1016/J.Pbi.2016.06.016 |
0.711 |
|
| 2016 |
Ranjan A, Budke J, Rowland SD, Chitwood DH, Kumar R, Carriedo LG, Ichihashi Y, Zumstein K, Maloof JN, Sinha N. eQTL regulating Transcript Levels Associated with Diverse Biological Processes in Tomato. Plant Physiology. PMID 27418589 DOI: 10.1104/Pp.16.00289 |
0.774 |
|
| 2016 |
Chitwood DH, Sinha NR. Evolutionary and Environmental Forces Sculpting Leaf Development. Current Biology : Cb. 26: R297-306. PMID 27046820 DOI: 10.1016/J.Cub.2016.02.033 |
0.478 |
|
| 2016 |
Nguyen TT, Slaughter DC, Maloof JN, Sinha N. Plant phenotyping using multi-view stereo vision with structured lights Proceedings of Spie - the International Society For Optical Engineering. 9866. DOI: 10.1117/12.2229513 |
0.309 |
|
| 2015 |
Ostria-Gallardo E, Ranjan A, Chitwood DH, Kumar R, Townsley BT, Ichihashi Y, Corcuera LJ, Sinha NR. Transcriptomic analysis suggests a key role for SQUAMOSA PROMOTER BINDING PROTEIN LIKE, NAC and YUCCA genes in the heteroblastic development of the temperate rainforest tree Gevuina avellana (Proteaceae). The New Phytologist. PMID 26680017 DOI: 10.1111/Nph.13776 |
0.83 |
|
| 2015 |
Müller NA, Wijnen CL, Srinivasan A, Ryngajllo M, Ofner I, Lin T, Ranjan A, West D, Maloof JN, Sinha NR, Huang S, Zamir D, Jiménez-Gómez JM. Domestication selected for deceleration of the circadian clock in cultivated tomato. Nature Genetics. PMID 26569124 DOI: 10.1038/Ng.3447 |
0.429 |
|
| 2015 |
Chitwood DH, Kumar R, Ranjan A, Pelletier JM, Townsley B, Ichihashi Y, Martinez CC, Zumstein K, Harada JJ, Maloof JN, Sinha N. Light-induced indeterminacy alters shade avoiding tomato leaf morphology. Plant Physiology. PMID 26381315 DOI: 10.1104/Pp.15.01229 |
0.825 |
|
| 2015 |
Nguyen TT, Slaughter DC, Max N, Maloof JN, Sinha N. Structured Light-Based 3D Reconstruction System for Plants. Sensors (Basel, Switzerland). 15: 18587-612. PMID 26230701 DOI: 10.3390/S150818587 |
0.413 |
|
| 2015 |
Townsley BT, Covington MF, Ichihashi Y, Zumstein K, Sinha NR. BrAD-seq: Breath Adapter Directional sequencing: a streamlined, ultra-simple and fast library preparation protocol for strand specific mRNA library construction. Frontiers in Plant Science. 6: 366. PMID 26052336 DOI: 10.3389/Fpls.2015.00366 |
0.77 |
|
| 2015 |
Ranjan A, Townsley BT, Ichihashi Y, Sinha NR, Chitwood DH. An intracellular transcriptomic atlas of the giant coenocyte Caulerpa taxifolia. Plos Genetics. 11: e1004900. PMID 25569326 DOI: 10.1371/Journal.Pgen.1004900 |
0.834 |
|
| 2015 |
Aguilar-Martínez JA, Uchida N, Townsley B, West DA, Yanez A, Lynn N, Kimura S, Sinha N. Transcriptional, posttranscriptional, and posttranslational regulation of SHOOT MERISTEMLESS gene expression in Arabidopsis determines gene function in the shoot apex. Plant Physiology. 167: 424-42. PMID 25524441 DOI: 10.1104/Pp.114.248625 |
0.819 |
|
| 2014 |
Nakayama H, Nakayama N, Seiki S, Kojima M, Sakakibara H, Sinha N, Kimura S. Regulation of the KNOX-GA gene module induces heterophyllic alteration in North American lake cress. The Plant Cell. 26: 4733-48. PMID 25516600 DOI: 10.1105/Tpc.114.130229 |
0.825 |
|
| 2014 |
Chitwood DH, Sinha NR. Plant development: small RNAs and the metamorphosis of leaves. Current Biology : Cb. 24: R1087-9. PMID 25458218 DOI: 10.1016/J.Cub.2014.10.013 |
0.464 |
|
| 2014 |
Chitwood DH, Ranjan A, Kumar R, Ichihashi Y, Zumstein K, Headland LR, Ostria-Gallardo E, Aguilar-Martínez JA, Bush S, Carriedo L, Fulop D, Martinez CC, Peng J, Maloof JN, Sinha NR. Resolving distinct genetic regulators of tomato leaf shape within a heteroblastic and ontogenetic context. The Plant Cell. 26: 3616-29. PMID 25271240 DOI: 10.1105/Tpc.114.130112 |
0.728 |
|
| 2014 |
Bolger A, Scossa F, Bolger ME, Lanz C, Maumus F, Tohge T, Quesneville H, Alseekh S, Sørensen I, Lichtenstein G, Fich EA, Conte M, Keller H, Schneeberger K, Schwacke R, ... ... Sinha N, et al. The genome of the stress-tolerant wild tomato species Solanum pennellii. Nature Genetics. 46: 1034-8. PMID 25064008 DOI: 10.1038/Ng.3046 |
0.785 |
|
| 2014 |
Ichihashi Y, Aguilar-MartÃnez JA, Farhi M, Chitwood DH, Kumar R, Millon LV, Peng J, Maloof JN, Sinha NR. Evolutionary developmental transcriptomics reveals a gene network module regulating interspecific diversity in plant leaf shape. Proceedings of the National Academy of Sciences of the United States of America. 111: E2616-21. PMID 24927584 DOI: 10.1073/Pnas.1402835111 |
0.767 |
|
| 2014 |
Ron M, Kajala K, Pauluzzi G, Wang D, Reynoso MA, Zumstein K, Garcha J, Winte S, Masson H, Inagaki S, Federici F, Sinha N, Deal RB, Bailey-Serres J, Brady SM. Hairy root transformation using Agrobacterium rhizogenes as a tool for exploring cell type-specific gene expression and function using tomato as a model. Plant Physiology. 166: 455-69. PMID 24868032 DOI: 10.1104/Pp.114.239392 |
0.685 |
|
| 2014 |
Garcês HM, Koenig D, Townsley BT, Kim M, Sinha NR. Truncation of LEAFY COTYLEDON1 protein is required for asexual reproduction in Kalanchoë daigremontiana. Plant Physiology. 165: 196-206. PMID 24664206 DOI: 10.1104/Pp.114.237222 |
0.812 |
|
| 2014 |
Ichihashi Y, Sinha NR. From genome to phenome and back in tomato. Current Opinion in Plant Biology. 18: 9-15. PMID 24440917 DOI: 10.1016/J.Pbi.2013.12.004 |
0.674 |
|
| 2014 |
Ranjan A, Ichihashi Y, Farhi M, Zumstein K, Townsley B, David-Schwartz R, Sinha NR. De novo assembly and characterization of the transcriptome of the parasitic weed dodder identifies genes associated with plant parasitism. Plant Physiology. 166: 1186-99. PMID 24399359 DOI: 10.1104/Pp.113.234864 |
0.828 |
|
| 2014 |
Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, ... ... Sinha NR, et al. A modern ampelography: a genetic basis for leaf shape and venation patterning in grape. Plant Physiology. 164: 259-72. PMID 24285849 DOI: 10.1104/Pp.113.229708 |
0.516 |
|
| 2014 |
Sousa-Baena MS, Lohmann LG, Rossi M, Sinha NR. Acquisition and diversification of tendrilled leaves in Bignonieae (Bignoniaceae) involved changes in expression patterns of SHOOTMERISTEMLESS (STM), LEAFY/FLORICAULA (LFY/FLO), and PHANTASTICA (PHAN). The New Phytologist. 201: 993-1008. PMID 24237175 DOI: 10.1111/Nph.12582 |
0.451 |
|
| 2014 |
Ron M, Kajala K, Pauluzzui G, Wang D, Reynoso MA, Zumstein K, Garcha J, Winte S, Masson H, Inagaki S, Federici F, Sinha N, Deal R, Bailey-Serres J, Brady S. A rapid method for translating molecular tools for crop species F1000research. 5. DOI: 10.7490/F1000Research.1097119.1 |
0.579 |
|
| 2014 |
Sousa-Baena MS, Sinha NR, Lohmann LG. Evolution and Development of Tendrils in Bignonieae (Lamiales, Bignoniaceae)1 Annals of the Missouri Botanical Garden. 99: 323-347. DOI: 10.3417/2011018 |
0.364 |
|
| 2013 |
Aguilar-Martínez JA, Sinha N. Analysis of the role of Arabidopsis class I TCP genes AtTCP7, AtTCP8, AtTCP22, and AtTCP23 in leaf development. Frontiers in Plant Science. 4: 406. PMID 24137171 DOI: 10.3389/Fpls.2013.00406 |
0.496 |
|
| 2013 |
Chitwood DH, Kumar R, Headland LR, Ranjan A, Covington MF, Ichihashi Y, Fulop D, Jiménez-Gómez JM, Peng J, Maloof JN, Sinha NR. A quantitative genetic basis for leaf morphology in a set of precisely defined tomato introgression lines. The Plant Cell. 25: 2465-81. PMID 23872539 DOI: 10.1105/Tpc.113.112391 |
0.698 |
|
| 2013 |
Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, ... ... Sinha NR, et al. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62. PMID 23803858 DOI: 10.1073/Pnas.1309606110 |
0.823 |
|
| 2013 |
Townsley BT, Sinha NR, Kang J. KNOX1 genes regulate lignin deposition and composition in monocots and dicots. Frontiers in Plant Science. 4: 121. PMID 23653631 DOI: 10.3389/Fpls.2013.00121 |
0.829 |
|
| 2013 |
Chitwood DH, Maloof JN, Sinha NR. Dynamic transcriptomic profiles between tomato and a wild relative reflect distinct developmental architectures. Plant Physiology. 162: 537-52. PMID 23585653 DOI: 10.1104/Pp.112.213546 |
0.404 |
|
| 2013 |
Naz AA, Raman S, Martinez CC, Sinha NR, Schmitz G, Theres K. Trifoliate encodes an MYB transcription factor that modulates leaf and shoot architecture in tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: 2401-6. PMID 23341595 DOI: 10.1073/Pnas.1214300110 |
0.535 |
|
| 2013 |
Chitwood DH, Sinha NR. A census of cells in time: quantitative genetics meets developmental biology. Current Opinion in Plant Biology. 16: 92-9. PMID 23218243 DOI: 10.1016/J.Pbi.2012.11.003 |
0.328 |
|
| 2013 |
Sharlach M, Dahlbeck D, Liu L, Chiu J, Jiménez-Gómez JM, Kimura S, Koenig D, Maloof JN, Sinha N, Minsavage GV, Jones JB, Stall RE, Staskawicz BJ. Fine genetic mapping of RXopJ4, a bacterial spot disease resistance locus from Solanum pennellii LA716. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 126: 601-9. PMID 23117718 DOI: 10.1007/S00122-012-2004-6 |
0.761 |
|
| 2013 |
Tindamanyire JM, Townsley B, Kiggundu A, Tushemereirwe W, Sinha N. Building a bi-directional promoter binary vector from the intergenic region of Arabidopsis thaliana cab1 and cab2 divergent genes useful for plant transformation African Journal of Biotechnology. 12: 1203-1208. DOI: 10.4314/Ajb.V12I11 |
0.514 |
|
| 2012 |
Kumar R, Ichihashi Y, Kimura S, Chitwood DH, Headland LR, Peng J, Maloof JN, Sinha NR. A High-Throughput Method for Illumina RNA-Seq Library Preparation. Frontiers in Plant Science. 3: 202. PMID 22973283 DOI: 10.3389/Fpls.2012.00202 |
0.778 |
|
| 2012 |
Ranjan A, Ichihashi Y, Sinha NR. The tomato genome: implications for plant breeding, genomics and evolution. Genome Biology. 13: 167. PMID 22943138 DOI: 10.1186/Gb-2012-13-8-167 |
0.669 |
|
| 2012 |
Chitwood DH, Naylor DT, Thammapichai P, Weeger AC, Headland LR, Sinha NR. Conflict between Intrinsic Leaf Asymmetry and Phyllotaxis in the Resupinate Leaves of Alstroemeria psittacina. Frontiers in Plant Science. 3: 182. PMID 22908025 DOI: 10.3389/Fpls.2012.00182 |
0.503 |
|
| 2012 |
Alakonya A, Kumar R, Koenig D, Kimura S, Townsley B, Runo S, Garces HM, Kang J, Yanez A, David-Schwartz R, Machuka J, Sinha N. Interspecific RNA interference of SHOOT MERISTEMLESS-like disrupts Cuscuta pentagona plant parasitism. The Plant Cell. 24: 3153-66. PMID 22822208 DOI: 10.1105/Tpc.112.099994 |
0.804 |
|
| 2012 |
Chitwood DH, Headland LR, Ranjan A, Martinez CC, Braybrook SA, Koenig DP, Kuhlemeier C, Smith RS, Sinha NR. Leaf asymmetry as a developmental constraint imposed by auxin-dependent phyllotactic patterning. The Plant Cell. 24: 2318-27. PMID 22722959 DOI: 10.1105/Tpc.112.098798 |
0.728 |
|
| 2012 |
Runo S, Macharia S, Alakonya A, Machuka J, Sinha N, Scholes J. Striga parasitizes transgenic hairy roots of Zea mays and provides a tool for studying plant-plant interactions. Plant Methods. 8: 20. PMID 22720750 DOI: 10.1186/1746-4811-8-20 |
0.397 |
|
| 2012 |
Townsley BT, Sinha NR. A new development: evolving concepts in leaf ontogeny. Annual Review of Plant Biology. 63: 535-62. PMID 22404465 DOI: 10.1146/Annurev-Arplant-042811-105524 |
0.787 |
|
| 2012 |
Chitwood DH, Headland LR, Filiault DL, Kumar R, Jiménez-Gómez JM, Schrager AV, Park DS, Peng J, Sinha NR, Maloof JN. Native environment modulates leaf size and response to simulated foliar shade across wild tomato species. Plos One. 7: e29570. PMID 22253737 DOI: 10.1371/Journal.Pone.0029570 |
0.579 |
|
| 2012 |
Chitwood DH, Headland LR, Kumar R, Peng J, Maloof JN, Sinha NR. The developmental trajectory of leaflet morphology in wild tomato species. Plant Physiology. 158: 1230-40. PMID 22247269 DOI: 10.1104/Pp.111.192518 |
0.531 |
|
| 2012 |
Geeta R, Dávalos LM, Levy A, Bohs L, Lavin M, Mummenhoff K, Sinha N, Wojciechowski MF. Keeping it simple: flowering plants tend to retain, and revert to, simple leaves. The New Phytologist. 193: 481-93. PMID 22091556 DOI: 10.1111/J.1469-8137.2011.03951.X |
0.401 |
|
| 2012 |
Nakayama H, Nakayama N, Nakamasu A, Sinha N, Kimura S. Toward elucidating the mechanisms that regulate heterophylly Plant Morphology. 24: 57-63. DOI: 10.5685/Plmorphol.24.57 |
0.793 |
|
| 2011 |
Sinha NR. Plant developmental biology in the post-genomic era. Frontiers in Plant Science. 2: 11. PMID 22629258 DOI: 10.3389/Fpls.2011.00011 |
0.48 |
|
| 2011 |
Runo S, Alakonya A, Machuka J, Sinha N. RNA interference as a resistance mechanism against crop parasites in Africa: a 'Trojan horse' approach. Pest Management Science. 67: 129-36. PMID 21061276 DOI: 10.1002/Ps.2052 |
0.37 |
|
| 2011 |
Kang J, Sinha NR. Regulation of leaf shape Access Science. DOI: 10.1036/1097-8542.Yb110032 |
0.467 |
|
| 2010 |
Koenig D, Sinha N. Evolution of leaf shape: A pattern emerges. Current Topics in Developmental Biology. 91: 169-83. PMID 20705182 DOI: 10.1016/S0070-2153(10)91006-5 |
0.751 |
|
| 2010 |
Ji J, Shimizu R, Sinha N, Scanlon MJ. Analyses of WOX4 transgenics provide further evidence for the evolution of the WOX gene family during the regulation of diverse stem cell functions. Plant Signaling & Behavior. 5: 916-20. PMID 20495368 DOI: 10.4161/Psb.5.7.12104 |
0.704 |
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| 2010 |
Ji J, Strable J, Shimizu R, Koenig D, Sinha N, Scanlon MJ. WOX4 promotes procambial development. Plant Physiology. 152: 1346-56. PMID 20044450 DOI: 10.1104/Pp.109.149641 |
0.829 |
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| 2010 |
Uchida N, Kimura S, Koenig D, Sinha N. Coordination of leaf development via regulation of KNOX1 genes. Journal of Plant Research. 123: 7-14. PMID 19506991 DOI: 10.1007/S10265-009-0248-2 |
0.843 |
|
| 2009 |
Garcês H, Sinha N. Transformation of the plant Kalanchoë daigremontiana using Agrobacterium tumefaciens. Cold Spring Harbor Protocols. 2009: pdb.prot5303. PMID 20147048 DOI: 10.1101/Pdb.Prot5303 |
0.383 |
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| 2009 |
Garcês H, Sinha N. In situ hybridization in the plant Kalanchoë daigremontiana. Cold Spring Harbor Protocols. 2009: pdb.prot5302. PMID 20147047 DOI: 10.1101/Pdb.Prot5302 |
0.407 |
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| 2009 |
Garcês H, Sinha N. Fixing and sectioning tissue from the plant Kalanchoë daigremontiana. Cold Spring Harbor Protocols. 2009: pdb.prot5301. PMID 20147046 DOI: 10.1101/Pdb.Prot5301 |
0.303 |
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| 2009 |
Garcês H, Sinha N. The 'mother of thousands' (Kalanchoë daigremontiana): a plant model for asexual reproduction and CAM studies. Cold Spring Harbor Protocols. 2009: pdb.emo133. PMID 20147034 DOI: 10.1101/Pdb.Emo133 |
0.48 |
|
| 2009 |
David-Schwartz R, Koenig D, Sinha NR. LYRATE is a key regulator of leaflet initiation and lamina outgrowth in tomato. The Plant Cell. 21: 3093-104. PMID 19820188 DOI: 10.1105/Tpc.109.069948 |
0.774 |
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| 2009 |
Koenig D, Bayer E, Kang J, Kuhlemeier C, Sinha N. Auxin patterns Solanum lycopersicum leaf morphogenesis. Development (Cambridge, England). 136: 2997-3006. PMID 19666826 DOI: 10.1242/Dev.033811 |
0.763 |
|
| 2008 |
Kimura S, Sinha N. Tomato transformation. Csh Protocols. 2008: pdb.prot5084. PMID 21356724 |
0.554 |
|
| 2008 |
Kimura S, Sinha N. Grafting tomato plants. Csh Protocols. 2008: pdb.prot5083. PMID 21356723 DOI: 10.1101/Pdb.Prot5083 |
0.637 |
|
| 2008 |
Kimura S, Sinha N. Crossing tomato plants. Csh Protocols. 2008: pdb.prot5082. PMID 21356722 DOI: 10.1101/Pdb.Prot5082 |
0.665 |
|
| 2008 |
Kimura S, Sinha N. How to grow tomatoes. Csh Protocols. 2008: pdb.prot5081. PMID 21356721 DOI: 10.1101/Pdb.Prot5081 |
0.651 |
|
| 2008 |
Kimura S, Sinha N. Tomato (Solanum lycopersicum): A Model Fruit-Bearing Crop. Csh Protocols. 2008: pdb.emo105. PMID 21356708 DOI: 10.1101/Pdb.Emo105 |
0.7 |
|
| 2008 |
David-Schwartz R, Runo S, Townsley B, Machuka J, Sinha N. Long-distance transport of mRNA via parenchyma cells and phloem across the host-parasite junction in Cuscuta. The New Phytologist. 179: 1133-41. PMID 18631294 DOI: 10.1111/J.1469-8137.2008.02540.X |
0.758 |
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| 2008 |
Kimura S, Koenig D, Kang J, Yoong FY, Sinha N. Natural variation in leaf morphology results from mutation of a novel KNOX gene. Current Biology : Cb. 18: 672-7. PMID 18424140 DOI: 10.1016/J.Cub.2008.04.008 |
0.823 |
|
| 2007 |
Champagne CE, Goliber TE, Wojciechowski MF, Mei RW, Townsley BT, Wang K, Paz MM, Geeta R, Sinha NR. Compound leaf development and evolution in the legumes. The Plant Cell. 19: 3369-78. PMID 17993625 DOI: 10.1105/Tpc.107.052886 |
0.808 |
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| 2007 |
Uchida N, Townsley B, Chung KH, Sinha N. Regulation of SHOOT MERISTEMLESS genes via an upstream-conserved noncoding sequence coordinates leaf development. Proceedings of the National Academy of Sciences of the United States of America. 104: 15953-8. PMID 17898165 DOI: 10.1073/Pnas.0707577104 |
0.848 |
|
| 2007 |
Garcês HM, Champagne CE, Townsley BT, Park S, Malhó R, Pedroso MC, Harada JJ, Sinha NR. Evolution of asexual reproduction in leaves of the genus Kalanchoë. Proceedings of the National Academy of Sciences of the United States of America. 104: 15578-83. PMID 17893341 DOI: 10.1073/Pnas.0704105104 |
0.819 |
|
| 2007 |
Kuhlemeier C, Sinha N. Growth and development. The diversity of plant development. Current Opinion in Plant Biology. 10: 1-3. PMID 17142085 DOI: 10.1016/J.Pbi.2006.11.012 |
0.422 |
|
| 2007 |
David‐Schwartz R, Sinha N. Evolution and Development in Plants: Bridging the Gap International Journal of Plant Sciences. 168: 49-59. DOI: 10.1086/509660 |
0.544 |
|
| 2006 |
Kessler S, Townsley B, Sinha N. L1 division and differentiation patterns influence shoot apical meristem maintenance. Plant Physiology. 141: 1349-62. PMID 16798950 DOI: 10.1104/Pp.105.076075 |
0.816 |
|
| 2006 |
Sun X, Barolo S, Bilder D, Montgomery M, Sinha N. Emerging from the fog: hypotheses and paradigms in developmental biology--the Society for Developmental Biology 2005 Annual Meeting Report. Developmental Biology. 289: 273-82. PMID 16337185 DOI: 10.1016/J.Ydbio.2005.10.039 |
0.397 |
|
| 2005 |
Groot EP, Sinha N, Gleissberg S. Expression patterns of STM-like KNOX and Histone H4 genes in shoot development of the dissected-leaved basal eudicot plants Chelidonium majus and Eschscholzia californica (Papaveraceae). Plant Molecular Biology. 58: 317-31. PMID 16021398 DOI: 10.1007/S11103-005-4548-1 |
0.533 |
|
| 2004 |
Champagne C, Sinha N. Compound leaves: equal to the sum of their parts? Development (Cambridge, England). 131: 4401-12. PMID 15342471 DOI: 10.1242/Dev.01338 |
0.433 |
|
| 2004 |
Kessler S, Sinha N. Shaping up: the genetic control of leaf shape. Current Opinion in Plant Biology. 7: 65-72. PMID 14732443 DOI: 10.1016/J.Pbi.2003.11.002 |
0.774 |
|
| 2003 |
Kim M, Pham T, Hamidi A, McCormick S, Kuzoff RK, Sinha N. Reduced leaf complexity in tomato wiry mutants suggests a role for PHAN and KNOX genes in generating compound leaves. Development (Cambridge, England). 130: 4405-15. PMID 12900456 DOI: 10.1242/Dev.00655 |
0.698 |
|
| 2003 |
Kim M, McCormick S, Timmermans M, Sinha N. The expression domain of PHANTASTICA determines leaflet placement in compound leaves. Nature. 424: 438-43. PMID 12879073 DOI: 10.1038/Nature01820 |
0.615 |
|
| 2003 |
Kim M, Sinha N. Regulating shapes and sizes. Developmental Cell. 4: 441-2. PMID 12689581 DOI: 10.1016/S1534-5807(03)00099-6 |
0.587 |
|
| 2003 |
Pham T, Sinha N. Role of Knox Genes in Shoot Development of Welwitschia mirabilis International Journal of Plant Sciences. 164: 333-343. DOI: 10.1086/374189 |
0.526 |
|
| 2002 |
Bharathan G, Goliber TE, Moore C, Kessler S, Pham T, Sinha NR. Homologies in leaf form inferred from KNOXI gene expression during development. Science (New York, N.Y.). 296: 1858-60. PMID 12052958 DOI: 10.1126/Science.1070343 |
0.799 |
|
| 2002 |
Kessler S, Seiki S, Sinha N. Xcl1 causes delayed oblique periclinal cell divisions in developing maize leaves, leading to cellular differentiation by lineage instead of position. Development (Cambridge, England). 129: 1859-69. PMID 11934852 |
0.714 |
|
| 2001 |
Kim M, Canio W, Kessler S, Sinha N. Developmental changes due to long-distance movement of a homeobox fusion transcript in tomato. Science (New York, N.Y.). 293: 287-9. PMID 11452121 DOI: 10.1126/Science.1059805 |
0.778 |
|
| 2001 |
Provencher LM, Miao L, Sinha N, Lucas WJ. Sucrose export defective1 encodes a novel protein implicated in chloroplast-to-nucleus signaling. The Plant Cell. 13: 1127-41. PMID 11340186 DOI: 10.1105/Tpc.13.5.1127 |
0.513 |
|
| 2001 |
Bharathan G, Sinha NR. The Regulation of Compound Leaf Development Plant Physiology. 127: 1533-1538. DOI: 10.1104/Pp.010867 |
0.449 |
|
| 2001 |
Kessler S, Kim M, Pham T, Weber N, Sinha N. Mutations Altering Leaf Morphology in Tomato International Journal of Plant Sciences. 162: 475-492. DOI: 10.1086/320136 |
0.785 |
|
| 2000 |
Running M, Scanlon M, Sinha N. Maize genetics 2000-and beyond. The Plant Cell. 12: 829-35. PMID 10852930 DOI: 10.1105/Tpc.12.6.829 |
0.608 |
|
| 1999 |
Sinha N. LEAF DEVELOPMENT IN ANGIOSPERMS. Annual Review of Plant Physiology and Plant Molecular Biology. 50: 419-446. PMID 15012215 DOI: 10.1146/annurev.arplant.50.1.419 |
0.433 |
|
| 1999 |
Bharathan G, Janssen BJ, Kellogg EA, Sinha N. Phylogenetic relationships and evolution of the KNOTTED class of plant homeodomain proteins. Molecular Biology and Evolution. 16: 553-63. PMID 10331280 DOI: 10.1093/Oxfordjournals.Molbev.A026136 |
0.445 |
|
| 1999 |
Goliber T, Kessler S, Chen JJ, Bharathan G, Sinha N. Genetic, molecular, and morphological analysis of compound leaf development. Current Topics in Developmental Biology. 43: 259-90. PMID 9891889 DOI: 10.1016/S0070-2153(08)60384-1 |
0.767 |
|
| 1998 |
Janssen B, Lund L, Sinha N. Overexpression of a Homeobox Gene, LeT6, Reveals Indeterminate Features in the Tomato Compound Leaf Plant Physiology. 117: 771-786. PMID 9662520 DOI: 10.1104/Pp.117.3.771 |
0.503 |
|
| 1998 |
Janssen BJ, Williams A, Chen JJ, Mathern J, Hake S, Sinha N. Isolation and characterization of two knotted-like homeobox genes from tomato. Plant Molecular Biology. 36: 417-25. PMID 9484482 DOI: 10.1023/A:1005925508579 |
0.769 |
|
| 1998 |
Sinha N. Organ and cell fusions in the adherent1 mutant in maize International Journal of Plant Sciences. 159: 702-715. DOI: 10.1086/297588 |
0.412 |
|
| 1998 |
Sinha N, Lynch M. Fused organs in the adherent1 mutation in maize show altered epidermal walls with no perturbations in tissue identities Planta. 206: 184-195. DOI: 10.1007/S004250050390 |
0.31 |
|
| 1997 |
Bharathan G, Janssen BJ, Kellogg EA, Sinha N. Did homeodomain proteins duplicate before the origin of angiosperms, fungi, and metazoa? Proceedings of the National Academy of Sciences of the United States of America. 94: 13749-53. PMID 9391098 DOI: 10.1073/Pnas.94.25.13749 |
0.305 |
|
| 1997 |
Chen J, Janssen B, Williams A, Sinha N. A gene fusion at a homeobox locus: alterations in leaf shape and implications for morphological evolution. The Plant Cell. 9: 1289-1304. PMID 9286107 DOI: 10.1105/Tpc.9.8.1289 |
0.505 |
|
| 1997 |
Sinha N. Simple and compound leaves: reduction or multiplication? Trends in Plant Science. 2: 396-402. DOI: 10.1016/S1360-1385(97)90055-8 |
0.42 |
|
| 1996 |
Sinha NR, Kellogg EA. Parallelism and diversity in multiple origins of C4 photosynthesis in the grass family American Journal of Botany. 83: 1458-1470. DOI: 10.1002/J.1537-2197.1996.Tb13940.X |
0.447 |
|
| 1994 |
Sinha N, Hake S. TheKnotted leaf blade is a mosaic of blade, sheath, and auricle identities Developmental Genetics. 15: 401-414. DOI: 10.1002/Dvg.1020150503 |
0.746 |
|
| 1993 |
Sinha N, Hake S, Freeling M. Genetic and molecular analysis of leaf development. Current Topics in Developmental Biology. 28: 47-80. PMID 8348842 DOI: 10.1016/S0070-2153(08)60209-4 |
0.829 |
|
| 1993 |
Sinha NR, Williams RE, Hake S. Overexpression of the maize homeo box gene, KNOTTED-1, causes a switch from determinate to indeterminate cell fates. Genes & Development. 7: 787-95. PMID 7684007 DOI: 10.1101/Gad.7.5.787 |
0.795 |
|
| 1992 |
Freeling M, Bertrand-Garcia R, Sinha N. Maize mutants and variants altering developmental time and their heterochronic interactions. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 14: 227-36. PMID 1596272 DOI: 10.1002/Bies.950140405 |
0.746 |
|
| 1991 |
Vollbrecht E, Veit B, Sinha N, Hake S. The developmental gene Knotted-1 is a member of a maize homeobox gene family Nature. 350: 241-243. PMID 1672445 DOI: 10.1038/350241A0 |
0.774 |
|
| 1990 |
Sinha N, Hake S. Mutant characters of knotted maize leaves are determined in the innermost tissue layers. Developmental Biology. 141: 203-10. PMID 2391001 DOI: 10.1016/0012-1606(90)90115-Y |
0.724 |
|
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