David W. Bolen - Publications

Affiliations: 
University of Texas Medical Branch, Galveston, TX 
Area:
General Biophysics

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Auton M, Rösgen J, Sinev M, Holthauzen LM, Bolen DW. Osmolyte effects on protein stability and solubility: a balancing act between backbone and side-chains. Biophysical Chemistry. 159: 90-9. PMID 21683504 DOI: 10.1016/J.Bpc.2011.05.012  0.432
2010 Holthauzen LM, Rösgen J, Bolen DW. Hydrogen bonding progressively strengthens upon transfer of the protein urea-denatured state to water and protecting osmolytes. Biochemistry. 49: 1310-8. PMID 20073511 DOI: 10.1021/bi9015499  0.319
2010 Street TO, Krukenberg KA, Rosgen J, Bolen DW, Agard DA. Osmolyte-induced conformational changes in the Hsp90 molecular chaperone. Protein Science : a Publication of the Protein Society. 19: 57-65. PMID 19890989 DOI: 10.1002/Pro.282  0.387
2008 Bolen DW, Rose GD. Structure and energetics of the hydrogen-bonded backbone in protein folding. Annual Review of Biochemistry. 77: 339-62. PMID 18518824 DOI: 10.1146/Annurev.Biochem.77.061306.131357  0.364
2008 Auton M, Bolen DW, Rösgen J. Structural thermodynamics of protein preferential solvation: osmolyte solvation of proteins, aminoacids, and peptides. Proteins. 73: 802-13. PMID 18498104 DOI: 10.1002/Prot.22103  0.31
2007 Auton M, Holthauzen LM, Bolen DW. Anatomy of energetic changes accompanying urea-induced protein denaturation. Proceedings of the National Academy of Sciences of the United States of America. 104: 15317-22. PMID 17878304 DOI: 10.1073/Pnas.0706251104  0.443
2007 Auton M, Bolen DW. Application of the transfer model to understand how naturally occurring osmolytes affect protein stability. Methods in Enzymology. 428: 397-418. PMID 17875431 DOI: 10.1016/S0076-6879(07)28023-1  0.318
2007 Rösgen J, Pettitt BM, Bolen DW. An analysis of the molecular origin of osmolyte-dependent protein stability. Protein Science : a Publication of the Protein Society. 16: 733-43. PMID 17327389 DOI: 10.1110/Ps.062671607  0.479
2007 Holthauzen LM, Bolen DW. Mixed osmolytes: the degree to which one osmolyte affects the protein stabilizing ability of another. Protein Science : a Publication of the Protein Society. 16: 293-8. PMID 17189473 DOI: 10.1110/Ps.062610407  0.554
2007 Ferreon AC, Ferreon JC, Bolen DW, Rösgen J. Protein phase diagrams II: nonideal behavior of biochemical reactions in the presence of osmolytes. Biophysical Journal. 92: 245-56. PMID 17028144 DOI: 10.1529/Biophysj.106.092262  0.691
2006 Street TO, Bolen DW, Rose GD. A molecular mechanism for osmolyte-induced protein stability. Proceedings of the National Academy of Sciences of the United States of America. 103: 13997-4002. PMID 16968772 DOI: 10.1073/Pnas.0606236103  0.41
2006 Auton M, Ferreon AC, Bolen DW. Metrics that differentiate the origins of osmolyte effects on protein stability: a test of the surface tension proposal. Journal of Molecular Biology. 361: 983-92. PMID 16889793 DOI: 10.1016/J.Jmb.2006.07.003  0.71
2006 Wu P, Bolen DW. Osmolyte-induced protein folding free energy changes. Proteins. 63: 290-6. PMID 16453342 DOI: 10.1002/prot.20868  0.433
2005 Auton M, Bolen DW. Predicting the energetics of osmolyte-induced protein folding/unfolding. Proceedings of the National Academy of Sciences of the United States of America. 102: 15065-8. PMID 16214887 DOI: 10.1073/Pnas.0507053102  0.328
2005 Rajagopalan L, Rösgen J, Bolen DW, Rajarathnam K. Novel use of an osmolyte to dissect multiple thermodynamic linkages in a chemokine ligand-receptor system. Biochemistry. 44: 12932-9. PMID 16185062 DOI: 10.1021/Bi051219Z  0.308
2005 Rösgen J, Pettitt BM, Bolen DW. Protein folding, stability, and solvation structure in osmolyte solutions. Biophysical Journal. 89: 2988-97. PMID 16113118 DOI: 10.1529/Biophysj.105.067330  0.444
2004 Rösgen J, Pettitt BM, Bolen DW. Uncovering the basis for nonideal behavior of biological molecules. Biochemistry. 43: 14472-84. PMID 15533052 DOI: 10.1021/Bi048681O  0.337
2004 Ferreon AC, Bolen DW. Thermodynamics of denaturant-induced unfolding of a protein that exhibits variable two-state denaturation. Biochemistry. 43: 13357-69. PMID 15491142 DOI: 10.1021/bi048666j  0.693
2004 Bolen DW. Effects of naturally occurring osmolytes on protein stability and solubility: issues important in protein crystallization. Methods (San Diego, Calif.). 34: 312-22. PMID 15325649 DOI: 10.1016/j.ymeth.2004.03.022  0.407
2004 Rösgen J, Pettitt BM, Perkyns J, Bolen DW. Statistical Thermodynamic Approach to the Chemical Activities in Two-Component Solutions Journal of Physical Chemistry B. 108: 2048-2055. DOI: 10.1021/Jp036325U  0.306
2003 Russo AT, Rösgen J, Bolen DW. Osmolyte effects on kinetics of FKBP12 C22A folding coupled with prolyl isomerization. Journal of Molecular Biology. 330: 851-66. PMID 12850152 DOI: 10.1016/S0022-2836(03)00626-0  0.425
2003 Qu Y, Bolen DW. Hydrogen exchange kinetics of RNase A and the urea:TMAO paradigm. Biochemistry. 42: 5837-49. PMID 12741842 DOI: 10.1021/bi0206457  0.39
2002 Qu Y, Bolen DW. Efficacy of macromolecular crowding in forcing proteins to fold. Biophysical Chemistry. 101: 155-65. PMID 12487997 DOI: 10.1016/S0301-4622(02)00148-5  0.376
2001 Bolen DW, Baskakov IV. The osmophobic effect: natural selection of a thermodynamic force in protein folding. Journal of Molecular Biology. 310: 955-63. PMID 11502004 DOI: 10.1006/Jmbi.2001.4819  0.632
2001 Bolen DW. Protein stabilization by naturally occurring osmolytes. Methods in Molecular Biology (Clifton, N.J.). 168: 17-36. PMID 11357625 DOI: 10.1385/1-59259-193-0:017  0.335
2001 Kumar R, Lee JC, Bolen DW, Thompson EB. The conformation of the glucocorticoid receptor af1/tau1 domain induced by osmolyte binds co-regulatory proteins. The Journal of Biological Chemistry. 276: 18146-52. PMID 11279138 DOI: 10.1074/jbc.M100825200  0.332
2000 Bolen DW, Yang M. Effects of guanidine hydrochloride on the proton inventory of proteins: implications on interpretations of protein stability. Biochemistry. 39: 15208-16. PMID 11106500 DOI: 10.1021/bi001071d  0.309
2000 Yang M, Ferreon AC, Bolen DW. Structural thermodynamics of a random coil protein in guanidine hydrochloride. Proteins. 44-9. PMID 11013399 DOI: 10.1002/1097-0134(2000)41:4+<44::AID-PROT40>3.0.CO;2-7  0.731
2000 Jamin M, Antalik M, Loh SN, Bolen DW, Baldwin RL. The unfolding enthalpy of the pH 4 molten globule of apomyoglobin measured by isothermal titration calorimetry Protein Science. 9: 1340-1346. PMID 10933499 DOI: 10.1110/Ps.9.7.1340  0.365
2000 Bolen D. Solvent properties, the osmophobic effect, and natural selection in protein folding Comparative Biochemistry and Physiology Part a: Molecular & Integrative Physiology. 126: 16. DOI: 10.1016/S1095-6433(00)80029-X  0.321
1999 Yang M, Liu D, Bolen DW. The peculiar nature of the guanidine hydrochloride-induced two-state denaturation of staphylococcal nuclease: a calorimetric study. Biochemistry. 38: 11216-22. PMID 10460179 DOI: 10.1021/Bi9909400  0.418
1999 Kumar R, Baskakov IV, Srinivasan G, Bolen DW, Lee JC, Thompson EB. Interdomain signaling in a two-domain fragment of the human glucocorticoid receptor. The Journal of Biological Chemistry. 274: 24737-41. PMID 10455143 DOI: 10.1074/Jbc.274.35.24737  0.591
1999 Baskakov IV, Bolen DW. The paradox between m values and deltaCp's for denaturation of ribonuclease T1 with disulfide bonds intact and broken. Protein Science : a Publication of the Protein Society. 8: 1314-9. PMID 10386881 DOI: 10.1110/Ps.8.6.1314  0.601
1999 Baskakov IV, Kumar R, Srinivasan G, Ji YS, Bolen DW, Thompson EB. Trimethylamine N-oxide-induced cooperative folding of an intrinsically unfolded transcription-activating fragment of human glucocorticoid receptor. The Journal of Biological Chemistry. 274: 10693-6. PMID 10196139 DOI: 10.1074/Jbc.274.16.10693  0.646
1998 Baskakov IV, Bolen DW. Monitoring the sizes of denatured ensembles of staphylococcal nuclease proteins: implications regarding m values, intermediates, and thermodynamics. Biochemistry. 37: 18010-7. PMID 9922169 DOI: 10.1021/Bi981849J  0.675
1998 Qu Y, Bolen CL, Bolen DW. Osmolyte-driven contraction of a random coil protein. Proceedings of the National Academy of Sciences of the United States of America. 95: 9268-73. PMID 9689069 DOI: 10.1073/pnas.95.16.9268  0.387
1998 Baskakov I, Wang A, Bolen DW. Trimethylamine-N-oxide counteracts urea effects on rabbit muscle lactate dehydrogenase function: a test of the counteraction hypothesis. Biophysical Journal. 74: 2666-73. PMID 9591690 DOI: 10.1016/S0006-3495(98)77972-X  0.638
1998 Baskakov I, Bolen DW. Time-dependent effects of trimethylamine-N-oxide/urea on lactate dehydrogenase activity: an unexplored dimension of the adaptation paradigm. Biophysical Journal. 74: 2658-65. PMID 9591689 DOI: 10.1016/S0006-3495(98)77971-8  0.604
1998 Baskakov I, Bolen DW. Forcing thermodynamically unfolded proteins to fold. The Journal of Biological Chemistry. 273: 4831-4. PMID 9478922 DOI: 10.1074/jbc.273.9.4831  0.668
1997 Wang A, Bolen DW. A naturally occurring protective system in urea-rich cells: mechanism of osmolyte protection of proteins against urea denaturation. Biochemistry. 36: 9101-8. PMID 9230042 DOI: 10.1021/bi970247h  0.429
1996 Wang A, Bolen DW. Effect of proline on lactate dehydrogenase activity: testing the generality and scope of the compatibility paradigm. Biophysical Journal. 71: 2117-22. PMID 8889186 DOI: 10.1016/S0006-3495(96)79410-9  0.381
1995 Yao M, Bolen DW. How valid are denaturant-induced unfolding free energy measurements? Level of conformance to common assumptions over an extended range of ribonuclease A stability. Biochemistry. 34: 3771-81. PMID 7893674  0.314
1995 Wang A, Robertson AD, Bolen DW. Effects of a naturally occurring compatible osmolyte on the internal dynamics of ribonuclease A. Biochemistry. 34: 15096-104. PMID 7578123  0.384
1992 Santoro MM, Liu Y, Khan SM, Hou LX, Bolen DW. Increased thermal stability of proteins in the presence of naturally occurring osmolytes. Biochemistry. 31: 5278-83. PMID 1376620  0.397
1988 Bolen DW, Santoro MM. Unfolding free energy changes determined by the linear extrapolation method. 2. Incorporation of delta G degrees N-U values in a thermodynamic cycle. Biochemistry. 27: 8069-74. PMID 3233196  0.305
1971 Bolen DW, Flögel M, Biltonen R. Calorimetric studies of protein--inhibitor interaction. I. Binding of 3'-cytidine monophosphate to ribonuclease A at pH 5.5. Biochemistry. 10: 4136-40. PMID 5161033 DOI: 10.1021/bi00798a019  0.582
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