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Thomas F Martinez, Ph.D. - Publications

Affiliations: 
2021- Pharmaceutical Sciences University of California, Irvine, Irvine, CA 
Area:
Characterizing smORFs, Translation, DNA Damage Response
Website:
https://faculty.sites.uci.edu/martinezlab/
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15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Morgado-Palacin L, Brown JA, Martinez TF, Garcia-Pedrero JM, Forouhar F, Quinn SA, Reglero C, Vaughan J, Heydary YH, Donaldson C, Rodriguez-Perales S, Allonca E, Granda-Diaz R, Fernandez AF, Fraga MF, et al. The TINCR ubiquitin-like microprotein is a tumor suppressor in squamous cell carcinoma. Nature Communications. 14: 1328. PMID 36899004 DOI: 10.1038/s41467-023-36713-8  0.518
2023 Martinez TF, Lyons-Abbott S, Bookout AL, De Souza EV, Donaldson C, Vaughan JM, Lau C, Abramov A, Baquero AF, Baquero K, Friedrich D, Huard J, Davis R, Kim B, Koch T, et al. Profiling mouse brown and white adipocytes to identify metabolically relevant small ORFs and functional microproteins. Cell Metabolism. 35: 166-183.e11. PMID 36599300 DOI: 10.1016/j.cmet.2022.12.004  0.504
2022 Mudge JM, Ruiz-Orera J, Prensner JR, Brunet MA, Calvet F, Jungreis I, Gonzalez JM, Magrane M, Martinez TF, Schulz JF, Yang YT, Albà MM, Aspden JL, Baranov PV, Bazzini AA, et al. Standardized annotation of translated open reading frames. Nature Biotechnology. PMID 35831657 DOI: 10.1038/s41587-022-01369-0  0.478
2021 Koh M, Ahmad I, Ko Y, Zhang Y, Martinez TF, Diedrich JK, Chu Q, Moresco JJ, Erb MA, Saghatelian A, Schultz PG, Bollong MJ. A short ORF-encoded transcriptional regulator. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33468658 DOI: 10.1073/pnas.2021943118  0.631
2020 Chen CY, Li Y, Jia T, He L, Hare AA, Silberstein A, Gallagher J, Martinez TF, Stiles JW, Olenyuk B, Dervan PB, Stiles BL. Repression of the transcriptional activity of ERRα with sequence-specific DNA-binding polyamides. Medicinal Chemistry Research : An International Journal For Rapid Communications On Design and Mechanisms of Action of Biologically Active Agents. 29: 607-616. PMID 34552311 DOI: 10.1007/s00044-019-02493-4  0.567
2020 Martinez TF, Vaughan J, Saghatelian A. Insights into GLP-1 Receptor Activation with a Nonpeptide Agonist. Biochemistry. PMID 32297516 DOI: 10.1021/Acs.Biochem.0C00180  0.526
2020 Martinez TF, Chu Q, Donaldson C, Tan D, Shokhirev MN, Saghatelian A. Accurate Annotation of Protein‐coding Small Open Reading Frames in the Human Genome The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.03051  0.541
2020 Chen C, Li Y, Jia T, He L, Hare AA, Silberstein A, Gallagher J, Martinez TF, Stiles JW, Olenyuk B, Dervan PB, Stiles BL. Repression of the transcriptional activity of ERRα with sequence-specific DNA-binding polyamides Medicinal Chemistry Research. 29: 607-616. DOI: 10.1007/S00044-019-02493-4  0.567
2019 Martinez TF, Chu Q, Donaldson C, Tan D, Shokhirev MN, Saghatelian A. Accurate annotation of human protein-coding small open reading frames. Nature Chemical Biology. PMID 31819274 DOI: 10.1038/S41589-019-0425-0  0.612
2019 Chu Q, Martinez TF, Novak SW, Donaldson CJ, Tan D, Vaughan JM, Chang T, Diedrich JK, Andrade L, Kim A, Zhang T, Manor U, Saghatelian A. Regulation of the ER stress response by a mitochondrial microprotein. Nature Communications. 10: 4883. PMID 31653868 DOI: 10.1096/Fasebj.2020.34.S1.04094  0.557
2019 Choi SH, Martinez TF, Kim S, Donaldson C, Shokhirev MN, Saghatelian A, Jones KA. CDK12 phosphorylates 4E-BP1 to enable mTORC1-dependent translation and mitotic genome stability. Genes & Development. PMID 30819820 DOI: 10.1101/Gad.322339.118  0.562
2018 Rathore A, Martinez TF, Chu Q, Saghatelian A. Small, but mighty? Searching for human microproteins and their potential for understanding health and disease. Expert Review of Proteomics. PMID 30415582 DOI: 10.1080/14789450.2018.1547194  0.494
2018 Rathore A, Chu Q, Tan D, Martinez TF, Donaldson CJ, Diedrich JK, Yates JR, Saghatelian A. MIEF1 Microprotein Regulates Mitochondrial Translation. Biochemistry. PMID 30215512 DOI: 10.1021/Acs.Biochem.8B00726  0.555
2015 Hargrove AE, Martinez TF, Hare AA, Kurmis AA, Phillips JW, Sud S, Pienta KJ, Dervan PB. Tumor Repression of VCaP Xenografts by a Pyrrole-Imidazole Polyamide. Plos One. 10: e0143161. PMID 26571387 DOI: 10.1371/Journal.Pone.0143161  0.653
2014 Martínez TF, Phillips JW, Karanja KK, Polaczek P, Wang CM, Li BC, Campbell JL, Dervan PB. Replication stress by Py-Im polyamides induces a non-canonical ATR-dependent checkpoint response. Nucleic Acids Research. 42: 11546-59. PMID 25249630 DOI: 10.1093/Nar/Gku866  0.597
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