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Satoshi Nagao - Publications

Affiliations: 
Chemistry and Biophysics University of Michigan, Ann Arbor, Ann Arbor, MI 
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Nagao S, Suda A, Kobayashi H, Shibata N, Higuchi Y, Hirota S. Thermodynamic Control of Domain Swapping by Modulating the Helical Propensity in the Hinge Region of Myoglobin. Chemistry, An Asian Journal. PMID 32329228 DOI: 10.1002/Asia.202000307  0.339
2020 Cahyono RN, Yamanaka M, Nagao S, Shibata N, Higuchi Y, Hirota S. 3D domain swapping of azurin from Alcaligenes xylosoxidans. Metallomics : Integrated Biometal Science. 12: 337-345. PMID 31956880 DOI: 10.2210/Pdb6L1V/Pdb  0.357
2019 Yang H, Yamanaka M, Nagao S, Yasuhara K, Shibata N, Higuchi Y, Hirota S. Protein surface charge effect on 3D domain swapping in cells for c-type cytochromes. Biochimica Et Biophysica Acta. Proteins and Proteomics. 140265. PMID 31437585 DOI: 10.1016/J.Bbapap.2019.140265  0.434
2018 Nugraheni AD, Ren C, Matsumoto Y, Nagao S, Yamanaka M, Hirota S. Oxidative modification of methionine80 in cytochrome c by reaction with peroxides. Journal of Inorganic Biochemistry. 182: 200-207. PMID 29510335 DOI: 10.1016/J.Jinorgbio.2018.02.017  0.424
2018 Oda A, Nagao S, Yamanaka M, Ueda I, Watanabe H, Uchihashi T, Shibata N, Higuchi Y, Hirota S. Construction of a Triangle-Shaped Trimer and a Tetrahedron Using an α-Helix-Inserted Circular Permutant of Cytochrome c. Chemistry, An Asian Journal. 13: 964-967. PMID 29484831 DOI: 10.1002/Asia.201800252  0.433
2018 Oda A, Nagao S, Yamanaka M, Ueda I, Watanabe H, Uchihashi T, Shibata N, Higuchi Y, Hirota S. Front Cover: Construction of a Triangle‐Shaped Trimer and a Tetrahedron Using an α‐Helix‐Inserted Circular Permutant of Cytochrome c555 (Chem. Asian J. 10/2018) Chemistry-An Asian Journal. 13: 1229-1229. DOI: 10.1002/Asia.201800587  0.4
2017 Gentry KA, Prade E, Barnaba C, Zhang M, Mahajan M, Im SC, Anantharamaiah GM, Nagao S, Waskell L, Ramamoorthy A. Kinetic and Structural Characterization of the Effects of Membrane on the Complex of Cytochrome band Cytochrome c. Scientific Reports. 7: 7793. PMID 28798301 DOI: 10.1038/S41598-017-08130-7  0.536
2017 Zhang M, Nakanishi T, Yamanaka M, Nagao S, Yanagisawa S, Shomura Y, Shibata N, Ogura T, Higuchi Y, Hirota S. Rational design of domain swapping-based c-type cytochrome heterodimers using chimeric proteins. Chembiochem : a European Journal of Chemical Biology. PMID 28660650 DOI: 10.1002/Cbic.201700219  0.425
2017 Hirota S, Yamashiro N, Wang Z, Nagao S. Effect of methionine80 heme coordination on domain swapping of cytochrome c. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. PMID 28246923 DOI: 10.1007/S00775-017-1446-3  0.488
2016 Yamanaka M, Hoshizumi M, Nagao S, Nakayama R, Shibata N, Higuchi Y, Hirota S. Formation and Carbon Monoxide-Dependent Dissociation of Allochromatium vinosum Cytochrome c' Oligomers Using Domain-Swapped Dimers. Protein Science : a Publication of the Protein Society. PMID 27883268 DOI: 10.1002/Pro.3090  0.415
2016 Kobayashi H, Nagao S, Hirota S. Characterization of the Cytochrome c Membrane-Binding Site Using Cardiolipin-Containing Bicelles with NMR. Angewandte Chemie (International Ed. in English). PMID 27723218 DOI: 10.1002/Anie.201607419  0.438
2016 Hayashi Y, Yamanaka M, Nagao S, Komori H, Higuchi Y, Hirota S. Domain swapping oligomerization of thermostable c-type cytochrome in E. coli cells. Scientific Reports. 6: 19334. PMID 26838805 DOI: 10.1038/Srep19334  0.457
2015 Miyamoto T, Kuribayashi M, Nagao S, Shomura Y, Higuchi Y, Hirota S. Domain-swapped cytochrome cb562 dimer and its nanocage encapsulating a Zn-SO4 cluster in the internal cavity. Chemical Science. 6: 7336-7342. PMID 28791095 DOI: 10.1039/C5Sc02428E  0.435
2015 Ren C, Nagao S, Yamanaka M, Komori H, Shomura Y, Higuchi Y, Hirota S. Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552via the elongation of the major hinge loop. Molecular Biosystems. 11: 3218-21. PMID 26451671 DOI: 10.1039/C5Mb00545K  0.414
2015 Nagao S, Ueda M, Osuka H, Komori H, Kamikubo H, Kataoka M, Higuchi Y, Hirota S. Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551: structural insights into domain swapping of cytochrome c family proteins. Plos One. 10: e0123653. PMID 25853415 DOI: 10.1371/Journal.Pone.0123653  0.497
2015 Yamanaka M, Nagao S, Komori H, Higuchi Y, Hirota S. Change in structure and ligand binding properties of hyperstable cytochrome c555 from Aquifex aeolicus by domain swapping. Protein Science : a Publication of the Protein Society. 24: 366-75. PMID 25586341 DOI: 10.1002/Pro.2627  0.477
2015 Nagao S, Ishikawa H, Yamada T, Mizutani Y, Hirota S. Carbon monoxide binding properties of domain-swapped dimeric myoglobin. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 20: 523-30. PMID 25578811 DOI: 10.1007/S00775-014-1236-0  0.366
2015 Lin YW, Nagao S, Zhang M, Shomura Y, Higuchi Y, Hirota S. Rational design of heterodimeric protein using domain swapping for myoglobin. Angewandte Chemie (International Ed. in English). 54: 511-5. PMID 25370865 DOI: 10.1002/Anie.201409267  0.34
2015 Nagao S, Ueda M, Osuka H, Komori H, Kamikubo H, Kataoka M, Higuchi Y, Hirota S. Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551: Structural insights into domain swapping of cytochrome c family proteins Plos One. 10. DOI: 10.1371/journal.pone.0123653  0.414
2014 Wang Z, Ando Y, Nugraheni AD, Ren C, Nagao S, Hirota S. Self-oxidation of cytochrome c at methionine80 with molecular oxygen induced by cleavage of the Met-heme iron bond. Molecular Biosystems. 10: 3130-7. PMID 25224641 DOI: 10.1039/C4Mb00285G  0.431
2014 Deshpande MS, Parui PP, Kamikubo H, Yamanaka M, Nagao S, Komori H, Kataoka M, Higuchi Y, Hirota S. Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer. Biochemistry. 53: 4696-703. PMID 24981551 DOI: 10.1021/Bi500497S  0.425
2014 Junedi S, Yasuhara K, Nagao S, Kikuchi J, Hirota S. Morphological change of cell membrane by interaction with domain-swapped cytochrome c oligomers. Chembiochem : a European Journal of Chemical Biology. 15: 517-21. PMID 24449526 DOI: 10.1002/Cbic.201300728  0.44
2014 Nishimura R, Shibata T, Ishigami I, Ogura T, Tai H, Nagao S, Matsuo T, Hirota S, Shoji O, Watanabe Y, Imai K, Neya S, Suzuki A, Yamamoto Y. Electronic control of discrimination between O2 and CO in myoglobin lacking the distal histidine residue. Inorganic Chemistry. 53: 1091-9. PMID 24377722 DOI: 10.1021/Ic402625S  0.306
2013 Parui PP, Deshpande MS, Nagao S, Kamikubo H, Komori H, Higuchi Y, Kataoka M, Hirota S. Formation of oligomeric cytochrome c during folding by intermolecular hydrophobic interaction between N- and C-terminal α-helices. Biochemistry. 52: 8732-44. PMID 24206001 DOI: 10.1021/Bi400986G  0.48
2013 Nugraheni AD, Nagao S, Yanagisawa S, Ogura T, Hirota S. Interaction of dimeric horse cytochrome c with cyanide ion. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 18: 383-90. PMID 23412550 DOI: 10.1007/S00775-013-0982-8  0.441
2013 Deshpande M, Parui P, Yamanaka M, Nagao S, Kamikubo H, Kataoka M, Komori H, Higuchi Y, Hirota S. 2P055 Domain-Swapped Oligomerization and Molten Globule State of Cytochrome c(01C. Protein: Property) Seibutsu Butsuri. 53. DOI: 10.2142/Biophys.53.S168_1  0.452
2013 Junedi S, Yasuhara K, Nagao S, Kikuchi J, Hirota S. 2P054 Binding of Oligomeric Cytochrome c to Cell Membrane(01C. Protein: Property) Seibutsu Butsuri. 53. DOI: 10.2142/Biophys.53.S167_6  0.414
2012 Hayashi Y, Nagao S, Osuka H, Komori H, Higuchi Y, Hirota S. Domain swapping of the heme and N-terminal α-helix in Hydrogenobacter thermophilus cytochrome c(552) dimer. Biochemistry. 51: 8608-16. PMID 23035813 DOI: 10.1021/Bi3011303  0.443
2012 Hirota S, Ueda M, Hayashi Y, Nagao S, Kamikubo H, Kataoka M. Maintenance of the secondary structure of horse cytochrome c during the conversion process of monomers to oligomers by addition of ethanol. Journal of Biochemistry. 152: 521-9. PMID 22923742 DOI: 10.1093/Jb/Mvs098  0.425
2012 Nagao S, Osuka H, Yamada T, Uni T, Shomura Y, Imai K, Higuchi Y, Hirota S. Structural and oxygen binding properties of dimeric horse myoglobin. Dalton Transactions (Cambridge, England : 2003). 41: 11378-85. PMID 22885714 DOI: 10.1039/C2Dt30893B  0.362
2011 Wang Z, Matsuo T, Nagao S, Hirota S. Peroxidase activity enhancement of horse cytochrome c by dimerization. Organic & Biomolecular Chemistry. 9: 4766-9. PMID 21625690 DOI: 10.1039/C1Ob05552F  0.393
2011 Nagao S, Hattori Y, Ueda M, Taketa M, Osuka H, Komori H, Kamikubo H, Negi S, Sugiura Y, Kataoka M, Higuchi Y, Hirota S. 2SJ-03 Cytochrome c polymerization by domain swapping(2SJ New developments in protein complex research: From molecules to supramolecules and aggregates,The 49th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 51. DOI: 10.2142/Biophys.51.S22_6  0.397
2010 Taketa M, Komori H, Hattori Y, Nagao S, Hirota S, Higuchi Y. Crystallization and preliminary X-ray analysis of dimeric and trimeric cytochromes c from horse heart. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1477-9. PMID 21045299 DOI: 10.1107/S1744309110034913  0.407
2010 Hirota S, Hattori Y, Nagao S, Taketa M, Komori H, Kamikubo H, Wang Z, Takahashi I, Negi S, Sugiura Y, Kataoka M, Higuchi Y. Cytochrome c polymerization by successive domain swapping at the C-terminal helix. Proceedings of the National Academy of Sciences of the United States of America. 107: 12854-9. PMID 20615990 DOI: 10.1073/Pnas.1001839107  0.497
2010 Shibata T, Nagao S, Fukaya M, Tai H, Nagatomo S, Morihashi K, Matsuo T, Hirota S, Suzuki A, Imai K, Yamamoto Y. Effect of heme modification on oxygen affinity of myoglobin and equilibrium of the acid-alkaline transition in metmyoglobin. Journal of the American Chemical Society. 132: 6091-8. PMID 20392104 DOI: 10.1021/Ja909891Q  0.32
2010 Hirota S, Hattori Y, Nagao S, Taketa M, Komori H, Kamikubo H, Wang Z, Takahashi I, Negi S, Sugiura Y, Kataoka M, Higuchi Y. 3P023 Cytochrome c polymerization by successive domain swapping at the C-terminal helix(Protein: Structure,The 48th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 50. DOI: 10.2142/Biophys.50.S149_1  0.457
2008 Hirota S, Kawahara T, Beltramini M, Di Muro P, Magliozzo RS, Peisach J, Powers LS, Tanaka N, Nagao S, Bubacco L. Molecular basis of the Bohr effect in arthropod hemocyanin. The Journal of Biological Chemistry. 283: 31941-8. PMID 18725416 DOI: 10.1074/Jbc.M803433200  0.305
2004 Hirai Y, Nagao S, Mita H, Suzuki A, Yamamoto Y. 19F NMR Study on the Heme Electronic Structure in Oxy and Carbonmonoxy Reconstituted Myoglobins Bulletin of the Chemical Society of Japan. 77: 1485-1486. DOI: 10.1246/Bcsj.77.1485  0.314
2002 Nagao S, Negishi Y, Kato A, Nakamura Y, Nakajima A, Kaya K. Electronic structures of HonC60 clusters (n=1–5): High electron acceptability of C60 Journal of Chemical Physics. 117: 3169-3172. DOI: 10.1063/1.1492801  0.339
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