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Boaz Pirie Levi - Publications

Affiliations: 
2006 Stanford University, Palo Alto, CA 
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jin K, Yao Z, van Velthoven CTJ, Kaplan ES, Glattfelder K, Barlow ST, Boyer G, Carey D, Casper T, Chakka AB, Chakrabarty R, Clark M, Departee M, Desierto M, Gary A, ... ... Levi B, et al. Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. Biorxiv : the Preprint Server For Biology. PMID 38168182 DOI: 10.1101/2023.07.26.550355  0.422
2023 Mich JK, Ryu J, Wei AD, Gore BB, Guo R, Bard AM, Martinez RA, Bishaw Y, Luber E, Oliveira Santos LM, Miranda N, Ramirez JM, Ting JT, Lein ES, Levi BP, et al. AAV-mediated interneuron-specific gene replacement for Dravet syndrome. Biorxiv : the Preprint Server For Biology. PMID 38168178 DOI: 10.1101/2023.12.15.571820  0.751
2023 Yao Z, van Velthoven CTJ, Kunst M, Zhang M, McMillen D, Lee C, Jung W, Goldy J, Abdelhak A, Aitken M, Baker K, Baker P, Barkan E, Bertagnolli D, Bhandiwad A, ... ... Levi B, et al. A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. Nature. 624: 317-332. PMID 38092916 DOI: 10.1038/s41586-023-06812-z  0.434
2023 Tian W, Zhou J, Bartlett A, Zeng Q, Liu H, Castanon RG, Kenworthy M, Altshul J, Valadon C, Aldridge A, Nery JR, Chen H, Xu J, Johnson ND, Lucero J, ... ... Levi BP, et al. Single-cell DNA methylation and 3D genome architecture in the human brain. Science (New York, N.Y.). 382: eadf5357. PMID 37824674 DOI: 10.1126/science.adf5357  0.413
2023 Lee BR, Dalley R, Miller JA, Chartrand T, Close J, Mann R, Mukora A, Ng L, Alfiler L, Baker K, Bertagnolli D, Brouner K, Casper T, Csajbok E, Donadio N, ... ... Levi BP, et al. Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex. Science (New York, N.Y.). 382: eadf6484. PMID 37824669 DOI: 10.1126/science.adf6484  0.389
2023 Jorstad NL, Close J, Johansen N, Yanny AM, Barkan ER, Travaglini KJ, Bertagnolli D, Campos J, Casper T, Crichton K, Dee N, Ding SL, Gelfand E, Goldy J, Hirschstein D, ... ... Levi BP, et al. Transcriptomic cytoarchitecture reveals principles of human neocortex organization. Science (New York, N.Y.). 382: eadf6812. PMID 37824655 DOI: 10.1126/science.adf6812  0.744
2023 Johansen N, Somasundaram S, Travaglini KJ, Yanny AM, Shumyatcher M, Casper T, Cobbs C, Dee N, Ellenbogen R, Ferreira M, Goldy J, Guzman J, Gwinn R, Hirschstein D, Jorstad NL, ... ... Levi BP, et al. Interindividual variation in human cortical cell type abundance and expression. Science (New York, N.Y.). 382: eadf2359. PMID 37824649 DOI: 10.1126/science.adf2359  0.785
2023 Li YE, Preissl S, Miller M, Johnson ND, Wang Z, Jiao H, Zhu C, Wang Z, Xie Y, Poirion O, Kern C, Pinto-Duarte A, Tian W, Siletti K, Emerson N, ... ... Levi B, et al. A comparative atlas of single-cell chromatin accessibility in the human brain. Science (New York, N.Y.). 382: eadf7044. PMID 37824643 DOI: 10.1126/science.adf7044  0.398
2023 Mich JK, Sunil S, Johansen N, Martinez RA, Leytze M, Gore BB, Mahoney JT, Ben-Simon Y, Bishaw Y, Brouner K, Campos J, Canfield R, Casper T, Dee N, Egdorf T, ... ... Levi BP, et al. Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species. Biorxiv : the Preprint Server For Biology. PMID 37790503 DOI: 10.1101/2023.09.20.558718  0.757
2023 Chuapoco MR, Flytzanis NC, Goeden N, Christopher Octeau J, Roxas KM, Chan KY, Scherrer J, Winchester J, Blackburn RJ, Campos LJ, Man KNM, Sun J, Chen X, Lefevre A, Singh VP, ... ... Levi BP, et al. Adeno-associated viral vectors for functional intravenous gene transfer throughout the non-human primate brain. Nature Nanotechnology. PMID 37430038 DOI: 10.1038/s41565-023-01419-x  0.733
2023 Gabitto M, Travaglini K, Ariza J, Kaplan E, Long B, Rachleff V, Ding Y, Mahoney J, Dee N, Goldy J, Melief E, Brouner K, Compos J, Campos J, Carr A, ... ... Levi B, et al. Integrated multimodal cell atlas of Alzheimer's disease. Research Square. PMID 37292694 DOI: 10.21203/rs.3.rs-2921860/v1  0.764
2023 Chen X, Wolfe DA, Bindu DS, Zhang M, Taskin N, Goertsen D, Shay TF, Sullivan EE, Huang SF, Ravindra Kumar S, Arokiaraj CM, Plattner VM, Campos LJ, Mich JK, Monet D, ... ... Levi BP, et al. Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates. Nature Communications. 14: 3345. PMID 37291094 DOI: 10.1038/s41467-023-38582-7  0.75
2023 Yao Z, van Velthoven CTJ, Kunst M, Zhang M, McMillen D, Lee C, Jung W, Goldy J, Abdelhak A, Baker P, Barkan E, Bertagnolli D, Campos J, Carey D, Casper T, ... ... Levi B, et al. A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. Biorxiv : the Preprint Server For Biology. PMID 37034735 DOI: 10.1101/2023.03.06.531121  0.426
2023 Chen X, Wolfe DA, Sivadasan Bindu D, Zhang M, Taskin N, Goertsen D, Shay TF, Sullivan E, Huang SF, Ravindra Kumar S, Arokiaraj CM, Plattner V, Campos LJ, Mich J, Monet D, ... ... Levi BP, et al. Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates. Biorxiv : the Preprint Server For Biology. PMID 36711773 DOI: 10.1101/2023.01.12.523844  0.747
2021 Berg J, Sorensen SA, Ting JT, Miller JA, Chartrand T, Buchin A, Bakken TE, Budzillo A, Dee N, Ding SL, Gouwens NW, Hodge RD, Kalmbach B, Lee C, Lee BR, ... ... Levi BP, et al. Human neocortical expansion involves glutamatergic neuron diversification. Nature. 598: 151-158. PMID 34616067 DOI: 10.1038/s41586-021-03813-8  0.335
2021 Bakken TE, van Velthoven CT, Menon V, Hodge RD, Yao Z, Nguyen TN, Graybuck LT, Horwitz GD, Bertagnolli D, Goldy J, Yanny AM, Garren E, Parry S, Casper T, Shehata SI, ... ... Levi BP, et al. Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans. Elife. 10. PMID 34473054 DOI: 10.7554/eLife.64875  0.323
2021 Yao Z, van Velthoven CTJ, Nguyen TN, Goldy J, Sedeno-Cortes AE, Baftizadeh F, Bertagnolli D, Casper T, Chiang M, Crichton K, Ding SL, Fong O, Garren E, Glandon A, Gouwens NW, ... ... Levi B, et al. A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation. Cell. PMID 34004146 DOI: 10.1016/j.cell.2021.04.021  0.363
2021 Mich JK, Graybuck LT, Hess EE, Mahoney JT, Kojima Y, Ding Y, Somasundaram S, Miller JA, Kalmbach BE, Radaelli C, Gore BB, Weed N, Omstead V, Bishaw Y, Shapovalova NV, ... ... Levi BP, et al. Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex. Cell Reports. 34: 108754. PMID 33789096 DOI: 10.1016/j.celrep.2021.108754  0.75
2021 Graybuck LT, Daigle TL, Sedeño-Cortés AE, Walker M, Kalmbach B, Lenz GH, Morin E, Nguyen TN, Garren E, Bendrick JL, Kim TK, Zhou T, Mortrud M, Yao S, Siverts LA, ... ... Levi BP, et al. Enhancer viruses for combinatorial cell-subclass-specific labeling. Neuron. PMID 33789083 DOI: 10.1016/j.neuron.2021.03.011  0.792
2019 Hodge RD, Bakken TE, Miller JA, Smith KA, Barkan ER, Graybuck LT, Close JL, Long B, Johansen N, Penn O, Yao Z, Eggermont J, Höllt T, Levi BP, Shehata SI, et al. Conserved cell types with divergent features in human versus mouse cortex. Nature. PMID 31435019 DOI: 10.1038/S41586-019-1506-7  0.383
2018 Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TN, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S, Penn O, Bakken T, Menon V, Miller J, Fong O, ... ... Levi BP, et al. Shared and distinct transcriptomic cell types across neocortical areas. Nature. 563: 72-78. PMID 30382198 DOI: 10.1038/S41586-018-0654-5  0.343
2017 Close JL, Yao Z, Levi BP, Miller JA, Bakken TE, Menon V, Ting JT, Wall A, Krostag AR, Thomsen ER, Nelson AM, Mich JK, Hodge RD, Shehata SI, Glass IA, et al. Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. Neuron. 96: 949. PMID 29144976 DOI: 10.1016/j.neuron.2017.10.024  0.759
2017 Mich JK, Close JL, Levi BP. Putting Two Heads Together to Build a Better Brain. Cell Stem Cell. 21: 289-290. PMID 28886360 DOI: 10.1016/J.Stem.2017.08.017  0.762
2017 Jang S, Choubey S, Furchtgott L, Zou LN, Doyle A, Menon V, Loew EB, Krostag AR, Martinez RA, Madisen L, Levi BP, Ramanathan S. Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states. Elife. 6. PMID 28296635 DOI: 10.7554/Elife.20487  0.379
2017 Close JL, Yao Z, Levi BP, Miller JA, Bakken TE, Menon V, Ting JT, Wall A, Krostag AR, Thomsen ER, Nelson AM, Mich JK, Hodge RD, Shehata SI, Glass IA, et al. Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. Neuron. 93: 1035-1048.e5. PMID 28279351 DOI: 10.1016/J.Neuron.2017.02.014  0.786
2017 Yao Z, Mich JK, Ku S, Menon V, Krostag AR, Martinez RA, Furchtgott L, Mulholland H, Bort S, Fuqua MA, Gregor BW, Hodge RD, Jayabalu A, May RC, Melton S, ... ... Levi BP, et al. A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development. Cell Stem Cell. 20: 120-134. PMID 28094016 DOI: 10.1016/J.Stem.2016.09.011  0.801
2016 Tasic B, Menon V, Nguyen TN, Kim TK, Jarsky T, Yao Z, Levi B, Gray LT, Sorensen SA, Dolbeare T, Bertagnolli D, Goldy J, Shapovalova N, Parry S, Lee C, et al. Adult mouse cortical cell taxonomy revealed by single cell transcriptomics. Nature Neuroscience. PMID 26727548 DOI: 10.1038/Nn.4216  0.408
2015 Thomsen ER, Mich JK, Yao Z, Hodge RD, Doyle AM, Jang S, Shehata SI, Nelson AM, Shapovalova NV, Levi BP, Ramanathan S. Fixed single-cell transcriptomic characterization of human radial glial diversity. Nature Methods. PMID 26524239 DOI: 10.1038/Nmeth.3629  0.778
2014 van de Leemput J, Boles NC, Kiehl TR, Corneo B, Lederman P, Menon V, Lee C, Martinez RA, Levi BP, Thompson CL, Yao S, Kaykas A, Temple S, Fasano CA. CORTECON: a temporal transcriptome analysis of in vitro human cerebral cortex development from human embryonic stem cells. Neuron. 83: 51-68. PMID 24991954 DOI: 10.1016/J.Neuron.2014.05.013  0.344
2014 Nakada D, Oguro H, Levi BP, Ryan N, Kitano A, Saitoh Y, Takeichi M, Wendt GR, Morrison SJ. Oestrogen increases haematopoietic stem-cell self-renewal in females and during pregnancy. Nature. 505: 555-8. PMID 24451543 DOI: 10.1038/Nature12932  0.772
2011 Ghabrial AS, Levi BP, Krasnow MA. A systematic screen for tube morphogenesis and branching genes in the Drosophila tracheal system. Plos Genetics. 7: e1002087. PMID 21750678 DOI: 10.1371/Journal.Pgen.1002087  0.751
2011 Nakada D, Levi BP, Morrison SJ. Integrating physiological regulation with stem cell and tissue homeostasis. Neuron. 70: 703-18. PMID 21609826 DOI: 10.1016/J.Neuron.2011.05.011  0.754
2010 Chuikov S, Levi BP, Smith ML, Morrison SJ. Prdm16 promotes stem cell maintenance in multiple tissues, partly by regulating oxidative stress. Nature Cell Biology. 12: 999-1006. PMID 20835244 DOI: 10.1038/Ncb2101  0.767
2009 Levi BP, Yilmaz OH, Duester G, Morrison SJ. Aldehyde dehydrogenase 1a1 is dispensable for stem cell function in the mouse hematopoietic and nervous systems. Blood. 113: 1670-80. PMID 18971422 DOI: 10.1182/Blood-2008-05-156752  0.719
2008 Levi BP, Morrison SJ. Stem cells use distinct self-renewal programs at different ages. Cold Spring Harbor Symposia On Quantitative Biology. 73: 539-53. PMID 19150957 DOI: 10.1101/Sqb.2008.73.049  0.589
2006 Levi BP, Ghabrial AS, Krasnow MA. Drosophila talin and integrin genes are required for maintenance of tracheal terminal branches and luminal organization. Development (Cambridge, England). 133: 2383-93. PMID 16720877 DOI: 10.1242/Dev.02404  0.755
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